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The map label for this gene is elbB [H]

Identifier: 118581601

GI number: 118581601

Start: 3517407

End: 3518063

Strand: Reverse

Name: elbB [H]

Synonym: Ppro_3200

Alternate gene names: 118581601

Gene position: 3518063-3517407 (Counterclockwise)

Preceding gene: 118581602

Following gene: 118581600

Centisome position: 87.78

GC content: 64.69

Gene sequence:

>657_bases
ATGAAAAAGATTGGCGTTATCCTTTCCGGCTGCGGCGTACGCGACGGCAGCGAGATCCACGAGGCGGTCCTGACCCTGCT
GGCCATAGACAGGTGCGGTGCCGAGGCGGTCTGCATGGCACCCAACGTGGAGTTCCCCGAGACCGATCACCTGACCATGC
AGGAGACCGGCGCCATGCGCAACGTGCTGGTGGAGTCGGCACGCATCGCCCGCGGCAACATCCGCGACATCAAGGATGTC
AAGGCGACCGACCTGGATGCGGTGATCCTGCCGGGCGGATTCGGGGCGGCCAAGAACCTGTGCGACTTTGCCGTCAAGGG
GGCCGCCGCGACGGTAAACCCCCAGGTTGCCCGCCTGCTGAAGGAGATGGCGGCTGCCAGAAAGCCCATCGGCGCCATCT
GTATCGCCCCGGTGGTGATCGCGGCCGTCCTGGGCAAGGAGCTGGCCCCCAGCGTCACCATCGGCAACGACGCCGGAACC
GCAGCCGAGATAAGCAAGACCGGGGCCGTGCACCAGGAGTGCCCGGTGACCGGCGTCATCGTCGACTGCGAGAAGATGAT
CGTCACCACCCCGGCCTACATGCTGGCCAACCGCATCTCCCAGGTGCACGAGGGTATCGGCAAGTGTGTGAACGATATCG
TCAACATGATCTCCTAG

Upstream 100 bases:

>100_bases
CCTTTCAGGGGGAGGGGGCTGTTTCGGTTACACGGTTTTTCTCACCACCGCCCGCCGCTGATGGCGGGCTGATTCAACTG
CTCACAAGGAGGCATCTGAC

Downstream 100 bases:

>100_bases
AACAGCGGAGGAAGGGGCCGCCAGACCGTGGCGGCCCTGCTCACGGGAACAGCCATTGACTACGTTCGCCCTGCTCATTC
TCTTCGTTGTCGAGACCGCC

Product: isoprenoid biosynthesis protein with amidotransferase-like domain

Products: NA

Alternate protein names: Sigma cross-reacting protein 27A; SCRP-27A [H]

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MKKIGVILSGCGVRDGSEIHEAVLTLLAIDRCGAEAVCMAPNVEFPETDHLTMQETGAMRNVLVESARIARGNIRDIKDV
KATDLDAVILPGGFGAAKNLCDFAVKGAAATVNPQVARLLKEMAAARKPIGAICIAPVVIAAVLGKELAPSVTIGNDAGT
AAEISKTGAVHQECPVTGVIVDCEKMIVTTPAYMLANRISQVHEGIGKCVNDIVNMIS

Sequences:

>Translated_218_residues
MKKIGVILSGCGVRDGSEIHEAVLTLLAIDRCGAEAVCMAPNVEFPETDHLTMQETGAMRNVLVESARIARGNIRDIKDV
KATDLDAVILPGGFGAAKNLCDFAVKGAAATVNPQVARLLKEMAAARKPIGAICIAPVVIAAVLGKELAPSVTIGNDAGT
AAEISKTGAVHQECPVTGVIVDCEKMIVTTPAYMLANRISQVHEGIGKCVNDIVNMIS
>Mature_218_residues
MKKIGVILSGCGVRDGSEIHEAVLTLLAIDRCGAEAVCMAPNVEFPETDHLTMQETGAMRNVLVESARIARGNIRDIKDV
KATDLDAVILPGGFGAAKNLCDFAVKGAAATVNPQVARLLKEMAAARKPIGAICIAPVVIAAVLGKELAPSVTIGNDAGT
AAEISKTGAVHQECPVTGVIVDCEKMIVTTPAYMLANRISQVHEGIGKCVNDIVNMIS

Specific function: May be involved in the early steps of isoprenoid biosynthesis [H]

COG id: COG3155

COG function: function code Q; Uncharacterized protein involved in an early stage of isoprenoid biosynthesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ES1 family [H]

Homologues:

Organism=Homo sapiens, GI296531406, Length=226, Percent_Identity=46.0176991150442, Blast_Score=169, Evalue=2e-42,
Organism=Homo sapiens, GI296531408, Length=226, Percent_Identity=38.9380530973451, Blast_Score=127, Evalue=9e-30,
Organism=Escherichia coli, GI87082228, Length=215, Percent_Identity=51.6279069767442, Blast_Score=206, Evalue=1e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI [H]

EC number: NA

Molecular weight: Translated: 22685; Mature: 22685

Theoretical pI: Translated: 6.11; Mature: 6.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIGVILSGCGVRDGSEIHEAVLTLLAIDRCGAEAVCMAPNVEFPETDHLTMQETGAMR
CCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHH
NVLVESARIARGNIRDIKDVKATDLDAVILPGGFGAAKNLCDFAVKGAAATVNPQVARLL
HHHHHHHHHHCCCCCHHHHCCCCCCCEEEECCCCCHHHHHHHHHHCCCCCCCCHHHHHHH
KEMAAARKPIGAICIAPVVIAAVLGKELAPSVTIGNDAGTAAEISKTGAVHQECPVTGVI
HHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHCCCCCCCCCCCEEE
VDCEKMIVTTPAYMLANRISQVHEGIGKCVNDIVNMIS
ECCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKKIGVILSGCGVRDGSEIHEAVLTLLAIDRCGAEAVCMAPNVEFPETDHLTMQETGAMR
CCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHH
NVLVESARIARGNIRDIKDVKATDLDAVILPGGFGAAKNLCDFAVKGAAATVNPQVARLL
HHHHHHHHHHCCCCCHHHHCCCCCCCEEEECCCCCHHHHHHHHHHCCCCCCCCHHHHHHH
KEMAAARKPIGAICIAPVVIAAVLGKELAPSVTIGNDAGTAAEISKTGAVHQECPVTGVI
HHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHCCCCCCCCCCCEEE
VDCEKMIVTTPAYMLANRISQVHEGIGKCVNDIVNMIS
ECCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 1575737; 9603997 [H]