| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is pspE [C]
Identifier: 118581348
GI number: 118581348
Start: 3216471
End: 3216845
Strand: Direct
Name: pspE [C]
Synonym: Ppro_2943
Alternate gene names: 118581348
Gene position: 3216471-3216845 (Clockwise)
Preceding gene: 118581347
Following gene: 118581349
Centisome position: 80.25
GC content: 62.13
Gene sequence:
>375_bases ATGCCCGGATTCGTGACCAGACTGCTGCTTGTGACGTTCATGCTGCTCCTTCCGCTGACATCAGCCCGTGCGGAGACGGC CAGCAAACCTTCCGAGGAACTGGTCATCGACGTGCGCAGCGAAGCGGAGTGGAGGCAGGGGCACCTGGAAAACGCCATCC TGATCCCCTACGACCGGATTGGAACCGACATCGCCAGATTCACCGGCGACAAAAATGCCAGGCTGTACCTGTACTGCCGC AGCGGCAGAAGAACAGCCATCGCCGCCAAGGCCCTGACCAGGGTCGGCTACCGAAACCTGGTCAACCTGGGGACAATGGA GAACGCGGCCCGGACACTGAAGAGGCGCATCATCAGCGAGACGGCGGCCCCCTGA
Upstream 100 bases:
>100_bases CTGGGCACCATTAAACACCAAGGCCTTGCGCTTCCGACCGCAAGGCCTTTTTCTTTACCCAGCCCCCGTGACCGCCAATG CCCCAAAGAGGTGATCAGCA
Downstream 100 bases:
>100_bases CTGACCTTCTTGCATTTTCAGCCGCTGCTCCCTATACTCGCCGCTTCCGCGGCATCCACACACGAGCAAGGAGACCAACG TGATTCAGATCGATTTCAAC
Product: rhodanese domain-containing protein
Products: NA
Alternate protein names: Phage Shock Protein E; Phage Shock Protein; Phage Shock Protein PspE; Rhodanese-Like Domain Protein; Phage Shock Operon Rhodanese PspE; Periplasmic Protein; Rhodanese-Related Sulfurtransferase; Rhodanese Domain Protein
Number of amino acids: Translated: 124; Mature: 123
Protein sequence:
>124_residues MPGFVTRLLLVTFMLLLPLTSARAETASKPSEELVIDVRSEAEWRQGHLENAILIPYDRIGTDIARFTGDKNARLYLYCR SGRRTAIAAKALTRVGYRNLVNLGTMENAARTLKRRIISETAAP
Sequences:
>Translated_124_residues MPGFVTRLLLVTFMLLLPLTSARAETASKPSEELVIDVRSEAEWRQGHLENAILIPYDRIGTDIARFTGDKNARLYLYCR SGRRTAIAAKALTRVGYRNLVNLGTMENAARTLKRRIISETAAP >Mature_123_residues PGFVTRLLLVTFMLLLPLTSARAETASKPSEELVIDVRSEAEWRQGHLENAILIPYDRIGTDIARFTGDKNARLYLYCRS GRRTAIAAKALTRVGYRNLVNLGTMENAARTLKRRIISETAAP
Specific function: Unknown
COG id: COG0607
COG function: function code P; Rhodanese-related sulfurtransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13876; Mature: 13745
Theoretical pI: Translated: 10.66; Mature: 10.66
Prosite motif: PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGFVTRLLLVTFMLLLPLTSARAETASKPSEELVIDVRSEAEWRQGHLENAILIPYDRI CCHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCEEEECCCCCHHHHHCCCCEEECCHHHH GTDIARFTGDKNARLYLYCRSGRRTAIAAKALTRVGYRNLVNLGTMENAARTLKRRIISE HHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH TAAP CCCC >Mature Secondary Structure PGFVTRLLLVTFMLLLPLTSARAETASKPSEELVIDVRSEAEWRQGHLENAILIPYDRI CHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCEEEECCCCCHHHHHCCCCEEECCHHHH GTDIARFTGDKNARLYLYCRSGRRTAIAAKALTRVGYRNLVNLGTMENAARTLKRRIISE HHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH TAAP CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA