| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is hflX [H]
Identifier: 118581300
GI number: 118581300
Start: 3166585
End: 3168327
Strand: Direct
Name: hflX [H]
Synonym: Ppro_2895
Alternate gene names: 118581300
Gene position: 3166585-3168327 (Clockwise)
Preceding gene: 118581299
Following gene: 118581301
Centisome position: 79.01
GC content: 62.36
Gene sequence:
>1743_bases TTGCCATCGGCCCGCGGACGCAGTATCCTGAAAAGCATCTTCAGATCCTGGCAGCAACGGAGTCATCCCATCAAAGAAGT ATTCGGCAATCTCACGGGGCTGAAAACCAGCCAGATCCAGGCCCTTGAACGGCTCTACCGGCGGCGCATTCCCCAAGCCG AGTTTTGCACCCAAGAACTGGCCGGCAGACTGGTGGAGCTTTCCCTCGACATCCGCCGCCAGATCGGCATCTTGGTCAAC CGTTCCGGCATGGTGGAATACGTCATCGTCGGCGACGAACGGGGACTGGTCATTCCGGAACTGCGCGACTATCCCTTGGG AAAGCGCCCCTTGCGCGGACTGCGCCTGATCCACACCCATTTAAAGAACGAGCAGGTCAGTGAAGACGACCTGACCGACC TCTCCCTGCTTCGCCTGGACCTGCTGGCAGCCCTGCTGTTCTCTCCCGAAAAACGCAGAATTTCCGTTCAGATGGCCTGG ATCTCCCCGACCAGCTCCGGTCCGTCGACCATTACCGGTGCGATCACTACTTTCGAGCGGGTCGACCTGGAGTGTGCCCG CTTCCTGGAGGAACTGGAGGCTGACCTGTCGCGCTCCACGCGTGCCAAGAGCAGCGGCGTCGAGGCGCTGGAGCGTGCGA TCCTGGTCTCCGTCACCGTGGAGGGGACACGCCAGGAGGCTGAGGATTCCATCATGGAACTGCGCGAACTGGCCCGCACC GCGCAGATCGAGGTCCTGGACGAGTTCATCCAGCGGCCGCGCAGCATCAACCCCCGCTTCGTCATGGGAGAGGGCAAGAT GCGCGACGTGGTCATCCGGGCCCTGCAGCACGGCGCCACCATGCTGATTTTCGACCAGGAGCTGACCCCGGCCCAGATCC GGTCCATCTCTGCCATGACCGAGCTGAAAGCCATCGACCGCAGCCAGCTGATCCTGGACATCTTCGCCCGCCGCGCCCAG ACCCTTGACGGCAAGGTTCAGGTGGAGCTGGCACAACTGAAATACCTGCTGCCGCGCCTGACCGGACGGGGCGTGCAGAT GTCGCGGCTGATGGGGGGCATCGGGGGGCGCGGACCGGGCGAGACCAAGCTGGAGACCGACCGTCGCCGCATCCGCGACC GCATCGCCAGCCTGGAACGCGAACTGAAGGAACTCTCCCGCGGCCGCGACCAGCGCAGGCGCAAGCGGGTCAAGGCCAGC GTGCCGATCGTTTCCATCGTCGGCTATACCAACGCCGGCAAGTCCACCCTGCTCAACACCCTCACCAAGAGCAGGGTGTT TACCGAGGACCTGCTCTTCGCCACCCTGGACACATCCACCCGCAGGCTGCGTTTCCCCCTCGAACGCGAGGTAATCATCA CCGACACGGTCGGATTCATCCGTTCCCTCCCCGCATCGCTCTTGGGTGCCTTCAAGGCTACCCTGGAGGAACTGCGGGAC GCCGATCTGCTGCTGCATGTGGTGGACGCTTCAAATCCCCGTTTCGAGACCCACATCCAACAGGTTAACCGCATCCTGGA CGAACTGGAACTGGGCGACAAACCACGGCTTTTAATCTTCAACAAGTCCGACCTGCTCGCCAAACTGAAAAAGAGCGACA CCATCGCCTTCCTGAGGGTGCGCCAGTTTGCCCGCACCTGCGGCGGCATCATGATTGCAGCCACCGACCGCACGAGCATG TCACCACTCCTGGAGGAGTTGCAACGACGCTTCTGGCCGGACGAGTCGTCCCTGATTGATTGA
Upstream 100 bases:
>100_bases GTAGCCTCCCCCAGCACGACACCCGAATAAAGAAGGCCCTGGATGCCGGAATGGTCCAGGGCCTCTACATTGCCACCTCA CGGCCTGGAACGCCGCGCGC
Downstream 100 bases:
>100_bases CATAAACCGCGATTTGCCTGTATAGTCTCGCACATCTCACAGATCCCGGAATGCCATGCAGGACCTCAAATATCTGACTG AAAAAAAACGTTTCCCCCTG
Product: small GTP-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 580; Mature: 579
Protein sequence:
>580_residues MPSARGRSILKSIFRSWQQRSHPIKEVFGNLTGLKTSQIQALERLYRRRIPQAEFCTQELAGRLVELSLDIRRQIGILVN RSGMVEYVIVGDERGLVIPELRDYPLGKRPLRGLRLIHTHLKNEQVSEDDLTDLSLLRLDLLAALLFSPEKRRISVQMAW ISPTSSGPSTITGAITTFERVDLECARFLEELEADLSRSTRAKSSGVEALERAILVSVTVEGTRQEAEDSIMELRELART AQIEVLDEFIQRPRSINPRFVMGEGKMRDVVIRALQHGATMLIFDQELTPAQIRSISAMTELKAIDRSQLILDIFARRAQ TLDGKVQVELAQLKYLLPRLTGRGVQMSRLMGGIGGRGPGETKLETDRRRIRDRIASLERELKELSRGRDQRRRKRVKAS VPIVSIVGYTNAGKSTLLNTLTKSRVFTEDLLFATLDTSTRRLRFPLEREVIITDTVGFIRSLPASLLGAFKATLEELRD ADLLLHVVDASNPRFETHIQQVNRILDELELGDKPRLLIFNKSDLLAKLKKSDTIAFLRVRQFARTCGGIMIAATDRTSM SPLLEELQRRFWPDESSLID
Sequences:
>Translated_580_residues MPSARGRSILKSIFRSWQQRSHPIKEVFGNLTGLKTSQIQALERLYRRRIPQAEFCTQELAGRLVELSLDIRRQIGILVN RSGMVEYVIVGDERGLVIPELRDYPLGKRPLRGLRLIHTHLKNEQVSEDDLTDLSLLRLDLLAALLFSPEKRRISVQMAW ISPTSSGPSTITGAITTFERVDLECARFLEELEADLSRSTRAKSSGVEALERAILVSVTVEGTRQEAEDSIMELRELART AQIEVLDEFIQRPRSINPRFVMGEGKMRDVVIRALQHGATMLIFDQELTPAQIRSISAMTELKAIDRSQLILDIFARRAQ TLDGKVQVELAQLKYLLPRLTGRGVQMSRLMGGIGGRGPGETKLETDRRRIRDRIASLERELKELSRGRDQRRRKRVKAS VPIVSIVGYTNAGKSTLLNTLTKSRVFTEDLLFATLDTSTRRLRFPLEREVIITDTVGFIRSLPASLLGAFKATLEELRD ADLLLHVVDASNPRFETHIQQVNRILDELELGDKPRLLIFNKSDLLAKLKKSDTIAFLRVRQFARTCGGIMIAATDRTSM SPLLEELQRRFWPDESSLID >Mature_579_residues PSARGRSILKSIFRSWQQRSHPIKEVFGNLTGLKTSQIQALERLYRRRIPQAEFCTQELAGRLVELSLDIRRQIGILVNR SGMVEYVIVGDERGLVIPELRDYPLGKRPLRGLRLIHTHLKNEQVSEDDLTDLSLLRLDLLAALLFSPEKRRISVQMAWI SPTSSGPSTITGAITTFERVDLECARFLEELEADLSRSTRAKSSGVEALERAILVSVTVEGTRQEAEDSIMELRELARTA QIEVLDEFIQRPRSINPRFVMGEGKMRDVVIRALQHGATMLIFDQELTPAQIRSISAMTELKAIDRSQLILDIFARRAQT LDGKVQVELAQLKYLLPRLTGRGVQMSRLMGGIGGRGPGETKLETDRRRIRDRIASLERELKELSRGRDQRRRKRVKASV PIVSIVGYTNAGKSTLLNTLTKSRVFTEDLLFATLDTSTRRLRFPLEREVIITDTVGFIRSLPASLLGAFKATLEELRDA DLLLHVVDASNPRFETHIQQVNRILDELELGDKPRLLIFNKSDLLAKLKKSDTIAFLRVRQFARTCGGIMIAATDRTSMS PLLEELQRRFWPDESSLID
Specific function: Unknown
COG id: COG2262
COG function: function code R; GTPases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]
Homologues:
Organism=Homo sapiens, GI310133116, Length=188, Percent_Identity=36.1702127659575, Blast_Score=108, Evalue=2e-23, Organism=Homo sapiens, GI310133118, Length=205, Percent_Identity=34.1463414634146, Blast_Score=108, Evalue=2e-23, Organism=Homo sapiens, GI310124269, Length=174, Percent_Identity=37.3563218390805, Blast_Score=107, Evalue=3e-23, Organism=Homo sapiens, GI310124267, Length=174, Percent_Identity=37.3563218390805, Blast_Score=107, Evalue=3e-23, Organism=Homo sapiens, GI310124171, Length=174, Percent_Identity=37.3563218390805, Blast_Score=107, Evalue=3e-23, Organism=Homo sapiens, GI310124169, Length=174, Percent_Identity=37.3563218390805, Blast_Score=107, Evalue=3e-23, Organism=Escherichia coli, GI1790615, Length=319, Percent_Identity=45.7680250783699, Blast_Score=280, Evalue=1e-76, Organism=Caenorhabditis elegans, GI17561038, Length=228, Percent_Identity=31.140350877193, Blast_Score=116, Evalue=3e-26, Organism=Drosophila melanogaster, GI24650079, Length=333, Percent_Identity=30.03003003003, Blast_Score=119, Evalue=7e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR016496 - InterPro: IPR006073 - InterPro: IPR002917 [H]
Pfam domain/function: PF01926 MMR_HSR1 [H]
EC number: NA
Molecular weight: Translated: 65748; Mature: 65617
Theoretical pI: Translated: 10.44; Mature: 10.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSARGRSILKSIFRSWQQRSHPIKEVFGNLTGLKTSQIQALERLYRRRIPQAEFCTQEL CCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHH AGRLVELSLDIRRQIGILVNRSGMVEYVIVGDERGLVIPELRDYPLGKRPLRGLRLIHTH HHHHHHHHHHHHHHHCEEEECCCCEEEEEEECCCCEECCCCCCCCCCCCCHHHHHHHHHH LKNEQVSEDDLTDLSLLRLDLLAALLFSPEKRRISVQMAWISPTSSGPSTITGAITTFER HCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHH VDLECARFLEELEADLSRSTRAKSSGVEALERAILVSVTVEGTRQEAEDSIMELRELART HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHH AQIEVLDEFIQRPRSINPRFVMGEGKMRDVVIRALQHGATMLIFDQELTPAQIRSISAMT HHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHH ELKAIDRSQLILDIFARRAQTLDGKVQVELAQLKYLLPRLTGRGVQMSRLMGGIGGRGPG HHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCC ETKLETDRRRIRDRIASLERELKELSRGRDQRRRKRVKASVPIVSIVGYTNAGKSTLLNT CCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHH LTKSRVFTEDLLFATLDTSTRRLRFPLEREVIITDTVGFIRSLPASLLGAFKATLEELRD HHHHHHHHHHHHHHHCCCCCCEEECCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCC ADLLLHVVDASNPRFETHIQQVNRILDELELGDKPRLLIFNKSDLLAKLKKSDTIAFLRV HHHEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHCCCHHHHHHH RQFARTCGGIMIAATDRTSMSPLLEELQRRFWPDESSLID HHHHHHHCCEEEEECCCCCHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure PSARGRSILKSIFRSWQQRSHPIKEVFGNLTGLKTSQIQALERLYRRRIPQAEFCTQEL CCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHH AGRLVELSLDIRRQIGILVNRSGMVEYVIVGDERGLVIPELRDYPLGKRPLRGLRLIHTH HHHHHHHHHHHHHHHCEEEECCCCEEEEEEECCCCEECCCCCCCCCCCCCHHHHHHHHHH LKNEQVSEDDLTDLSLLRLDLLAALLFSPEKRRISVQMAWISPTSSGPSTITGAITTFER HCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHH VDLECARFLEELEADLSRSTRAKSSGVEALERAILVSVTVEGTRQEAEDSIMELRELART HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHH AQIEVLDEFIQRPRSINPRFVMGEGKMRDVVIRALQHGATMLIFDQELTPAQIRSISAMT HHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHH ELKAIDRSQLILDIFARRAQTLDGKVQVELAQLKYLLPRLTGRGVQMSRLMGGIGGRGPG HHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCC ETKLETDRRRIRDRIASLERELKELSRGRDQRRRKRVKASVPIVSIVGYTNAGKSTLLNT CCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHH LTKSRVFTEDLLFATLDTSTRRLRFPLEREVIITDTVGFIRSLPASLLGAFKATLEELRD HHHHHHHHHHHHHHHCCCCCCEEECCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCC ADLLLHVVDASNPRFETHIQQVNRILDELELGDKPRLLIFNKSDLLAKLKKSDTIAFLRV HHHEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHCCCHHHHHHH RQFARTCGGIMIAATDRTSMSPLLEELQRRFWPDESSLID HHHHHHHCCEEEEECCCCCHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8248183; 7610040; 9278503; 2020545; 3040675 [H]