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The map label for this gene is rbpE [H]

Identifier: 118581287

GI number: 118581287

Start: 3153861

End: 3154187

Strand: Reverse

Name: rbpE [H]

Synonym: Ppro_2882

Alternate gene names: 118581287

Gene position: 3154187-3153861 (Counterclockwise)

Preceding gene: 118581288

Following gene: 118581286

Centisome position: 78.7

GC content: 59.63

Gene sequence:

>327_bases
ATGAAAAAAGAACTGTATGTGGGAAGCATTTCAGCCAGGGCAACGGAGGAGGATATCAGGCACCTGTTCTCCATCTCCGG
CACCGTCACCTCCATCCACCTGATTAGAGATGCGCAGACAGGAGAATTCAAGGGATGCGGCTATGTCAGAATGGCAACTC
CCGAGCAGACCAAGGATGCGGTTGAAACCCTGGATGGCGCACTCCTGATCGACAAGGTGCTGACAGTCAGCATAGCCCGA
CCGCAGCCCCCCCAGAAGAAGAAGCAATTCGGAGGCGGCCGCCGCGGGCCGGGGCAGGAGCGGCGCCCCCGGGGCGGGAA
GAAGTAG

Upstream 100 bases:

>100_bases
TGGACCGAGCCCTGGCCTTCCATGCCGGCCACCGCCTGAAGAGCCTGGAGTTTCTGCGCCAGATAAGCAACGAGAACCAA
TGAACGAGAAAAGGAAACCG

Downstream 100 bases:

>100_bases
TCCCGGTCTCCGGCAGTCTCTTGCACGCAAGCAGAAACGGTCCATTAAATCAGGGCCTCTCAGGTCGCCCCTTTTGCTTT
CCTGGTGCGCCTGGCGGCCC

Product: RNP-1 like RNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 108; Mature: 108

Protein sequence:

>108_residues
MKKELYVGSISARATEEDIRHLFSISGTVTSIHLIRDAQTGEFKGCGYVRMATPEQTKDAVETLDGALLIDKVLTVSIAR
PQPPQKKKQFGGGRRGPGQERRPRGGKK

Sequences:

>Translated_108_residues
MKKELYVGSISARATEEDIRHLFSISGTVTSIHLIRDAQTGEFKGCGYVRMATPEQTKDAVETLDGALLIDKVLTVSIAR
PQPPQKKKQFGGGRRGPGQERRPRGGKK
>Mature_108_residues
MKKELYVGSISARATEEDIRHLFSISGTVTSIHLIRDAQTGEFKGCGYVRMATPEQTKDAVETLDGALLIDKVLTVSIAR
PQPPQKKKQFGGGRRGPGQERRPRGGKK

Specific function: Unknown

COG id: COG0724

COG function: function code R; RNA-binding proteins (RRM domain)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 RRM (RNA recognition motif) domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012677
- InterPro:   IPR000504
- InterPro:   IPR015465 [H]

Pfam domain/function: PF00076 RRM_1 [H]

EC number: NA

Molecular weight: Translated: 11850; Mature: 11850

Theoretical pI: Translated: 10.68; Mature: 10.68

Prosite motif: PS50102 RRM

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKELYVGSISARATEEDIRHLFSISGTVTSIHLIRDAQTGEFKGCGYVRMATPEQTKDA
CCCCEEEECCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCEEEECCCHHHHHH
VETLDGALLIDKVLTVSIARPQPPQKKKQFGGGRRGPGQERRPRGGKK
HHHHCCHHHHHHHHHEECCCCCCCHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKKELYVGSISARATEEDIRHLFSISGTVTSIHLIRDAQTGEFKGCGYVRMATPEQTKDA
CCCCEEEECCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCEEEECCCHHHHHH
VETLDGALLIDKVLTVSIARPQPPQKKKQFGGGRRGPGQERRPRGGKK
HHHHCCHHHHHHHHHEECCCCCCCHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]