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The map label for this gene is recO

Identifier: 118581288

GI number: 118581288

Start: 3154205

End: 3154945

Strand: Reverse

Name: recO

Synonym: Ppro_2883

Alternate gene names: 118581288

Gene position: 3154945-3154205 (Counterclockwise)

Preceding gene: 118581292

Following gene: 118581287

Centisome position: 78.72

GC content: 62.75

Gene sequence:

>741_bases
ATGCATCCGGAAAAACTCCAGGCATACGTCCTGTCAACCCTCGATTACGGCGACAGCGACCGGATCGTAGCGCTCTTCAC
CCTTGAGCATGGACGGATCAAGGCCTTTGCCCGGCGGGCCAGGAACAGCCGCAGGCGTTTCGGCGCCGCTCTTGAGATCT
TCGCCCGTATCGAGGCACATGTGGAAATCAAGCAGGGGGGGCTTTCCGGGCTGCGTCAGGCGGAGATCGACTGCATCTAC
CCCGGCATCCGCGGCGATCTGGGACGGATTGCCTATGCCCTGTACGCCTGCGAACTGGTGGATGCCATGACCCCCGAAGG
TCATCCGCTGCCGCGCCTGTTCCGTCTGCTGGCGGCATACCTGGACAGGCTGGAGGCGTATCCCGCCAGCGAGCAAGAAC
GCCGTTTCTTCGAGATCAACCTGCTCAACATCCTGGGCTACCGCCCATCCCTGGAAGCGTGCAGCCGTTGTGGAACGCCC
TTTGACGACCGGGGCGCCTTGCTGCTGGATGACGGAGAACTGGTCTGCCGCGCCTGCACCGGCCATGGCAGGGATATGAC
GCAGGTGACACTGGGGCGGATGCTGGCCTGCCTCAAGACCGGAACATTCGGACTGATCCACTTTCCGGACGAGGCGCAGG
CCCAGACAGGCAGTGCATTGGACCGAGCCCTGGCCTTCCATGCCGGCCACCGCCTGAAGAGCCTGGAGTTTCTGCGCCAG
ATAAGCAACGAGAACCAATGA

Upstream 100 bases:

>100_bases
CGGCTCCACGACGCATCACGAATGGTGCTGGCCAGCGAATAATAGTGGACGGCCGCCCCGGACCCCGCTAGACTGGTGGC
CATTCAACACAAGGGGAGTC

Downstream 100 bases:

>100_bases
ACGAGAAAAGGAAACCGATGAAAAAAGAACTGTATGTGGGAAGCATTTCAGCCAGGGCAACGGAGGAGGATATCAGGCAC
CTGTTCTCCATCTCCGGCAC

Product: DNA repair protein RecO

Products: NA

Alternate protein names: Recombination protein O

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MHPEKLQAYVLSTLDYGDSDRIVALFTLEHGRIKAFARRARNSRRRFGAALEIFARIEAHVEIKQGGLSGLRQAEIDCIY
PGIRGDLGRIAYALYACELVDAMTPEGHPLPRLFRLLAAYLDRLEAYPASEQERRFFEINLLNILGYRPSLEACSRCGTP
FDDRGALLLDDGELVCRACTGHGRDMTQVTLGRMLACLKTGTFGLIHFPDEAQAQTGSALDRALAFHAGHRLKSLEFLRQ
ISNENQ

Sequences:

>Translated_246_residues
MHPEKLQAYVLSTLDYGDSDRIVALFTLEHGRIKAFARRARNSRRRFGAALEIFARIEAHVEIKQGGLSGLRQAEIDCIY
PGIRGDLGRIAYALYACELVDAMTPEGHPLPRLFRLLAAYLDRLEAYPASEQERRFFEINLLNILGYRPSLEACSRCGTP
FDDRGALLLDDGELVCRACTGHGRDMTQVTLGRMLACLKTGTFGLIHFPDEAQAQTGSALDRALAFHAGHRLKSLEFLRQ
ISNENQ
>Mature_246_residues
MHPEKLQAYVLSTLDYGDSDRIVALFTLEHGRIKAFARRARNSRRRFGAALEIFARIEAHVEIKQGGLSGLRQAEIDCIY
PGIRGDLGRIAYALYACELVDAMTPEGHPLPRLFRLLAAYLDRLEAYPASEQERRFFEINLLNILGYRPSLEACSRCGTP
FDDRGALLLDDGELVCRACTGHGRDMTQVTLGRMLACLKTGTFGLIHFPDEAQAQTGSALDRALAFHAGHRLKSLEFLRQ
ISNENQ

Specific function: Involved in DNA repair and recF pathway recombination

COG id: COG1381

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recO family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RECO_PELPD (A1AT10)

Other databases:

- EMBL:   CP000482
- RefSeq:   YP_902538.1
- STRING:   A1AT10
- GeneID:   4573936
- GenomeReviews:   CP000482_GR
- KEGG:   ppd:Ppro_2883
- eggNOG:   COG1381
- HOGENOM:   HBG634481
- OMA:   WHLERGL
- ProtClustDB:   CLSK827924
- HAMAP:   MF_00201
- InterPro:   IPR001164
- InterPro:   IPR022572
- InterPro:   IPR016027
- InterPro:   IPR003717
- TIGRFAMs:   TIGR00613

Pfam domain/function: PF02565 RecO; PF11967 RecO_N; SSF57863 ArfGAP; SSF50249 Nucleic_acid_OB

EC number: NA

Molecular weight: Translated: 27523; Mature: 27523

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHPEKLQAYVLSTLDYGDSDRIVALFTLEHGRIKAFARRARNSRRRFGAALEIFARIEAH
CCHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VEIKQGGLSGLRQAEIDCIYPGIRGDLGRIAYALYACELVDAMTPEGHPLPRLFRLLAAY
EEEECCCCCHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
LDRLEAYPASEQERRFFEINLLNILGYRPSLEACSRCGTPFDDRGALLLDDGELVCRACT
HHHHHCCCCCCHHCEEEEEEEHHHHCCCCCHHHHHHCCCCCCCCCEEEEECCCEEEEECC
GHGRDMTQVTLGRMLACLKTGTFGLIHFPDEAQAQTGSALDRALAFHAGHRLKSLEFLRQ
CCCCCHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
ISNENQ
HHCCCC
>Mature Secondary Structure
MHPEKLQAYVLSTLDYGDSDRIVALFTLEHGRIKAFARRARNSRRRFGAALEIFARIEAH
CCHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VEIKQGGLSGLRQAEIDCIYPGIRGDLGRIAYALYACELVDAMTPEGHPLPRLFRLLAAY
EEEECCCCCHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
LDRLEAYPASEQERRFFEINLLNILGYRPSLEACSRCGTPFDDRGALLLDDGELVCRACT
HHHHHCCCCCCHHCEEEEEEEHHHHCCCCCHHHHHHCCCCCCCCCEEEEECCCEEEEECC
GHGRDMTQVTLGRMLACLKTGTFGLIHFPDEAQAQTGSALDRALAFHAGHRLKSLEFLRQ
CCCCCHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
ISNENQ
HHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA