Click here to switch to the map view.

The map label for this gene is wza [H]

Identifier: 118581286

GI number: 118581286

Start: 3152719

End: 3153408

Strand: Reverse

Name: wza [H]

Synonym: Ppro_2881

Alternate gene names: 118581286

Gene position: 3153408-3152719 (Counterclockwise)

Preceding gene: 118581287

Following gene: 118581285

Centisome position: 78.68

GC content: 53.19

Gene sequence:

>690_bases
ATGAAAGCACTATGCGTTTTGCAGTATATCCTGATTGCCCTGATGTTGACGGCATGCGCGACAACAGTGAACAACCCGGT
CCCTGTCCAGAGTTCAATTCAAGTATCCGACTCCAGTGCACAGGAGTACCGGATCAGAGCCGGCGACCTTCTTGATGTCA
AATTCTTCTACAACTCCGAGCTGAATGAGCAGGTCACCGTCCGTCCCGATGGCCGCATCTCTCTCCAGTTGGCCAACGAC
CTCATGGCCGGCGGCCTGACCCCCGCGGAACTCACCGAACAACTGAAAAAAAAATACGCATCCGAAATCGACAATCCAGA
GATAACCGTCATCGTGCGCTCATTCTCGTACCAGAGGATTTTTGTTGACGGAGAGGTCTTCAGGGCAGGCCTCATTCCGC
TGGTCGGCCAAATGACCGTTTTACAGTCAATCACACAGGCGGGGGGGAAAAAGGATACCGCCTATCTCAAGGGTGTGATT
GTCATCCGGCGAACGCCTGGCGACAAACTGGTTACCATGCAACTCAACCTGGAAGACGCACTGGACAACACCGACATGAC
TCAGGACATCGCCCTGCTGCCCAACGACATCGTCTTTGTCCCCAAGAGTACCATCGCCAACGTCAACGTGTGGGTTGATC
AGTATATCCGCAGAAACATTCCCGTCTCCATGGGATTAAGCCCGTTTTAG

Upstream 100 bases:

>100_bases
CTAACTGAGCACATGGACAGCCAACAACCACGGAAACGAGCGTACACTGCCAATAGAATAGTTTTCTGAAGACTCACTAA
ACAGAAATAGGGAGGCTAAT

Downstream 100 bases:

>100_bases
CTAAACAGAGGGGGTCAGTCATGAAAAGTCCGGCAAAGAGCCCTGCACGAGAAGCAAATGGCTTGAGAGAATTCCTGACC
ATAGTGTTCAAGCGTAAAAA

Product: polysaccharide export protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MKALCVLQYILIALMLTACATTVNNPVPVQSSIQVSDSSAQEYRIRAGDLLDVKFFYNSELNEQVTVRPDGRISLQLAND
LMAGGLTPAELTEQLKKKYASEIDNPEITVIVRSFSYQRIFVDGEVFRAGLIPLVGQMTVLQSITQAGGKKDTAYLKGVI
VIRRTPGDKLVTMQLNLEDALDNTDMTQDIALLPNDIVFVPKSTIANVNVWVDQYIRRNIPVSMGLSPF

Sequences:

>Translated_229_residues
MKALCVLQYILIALMLTACATTVNNPVPVQSSIQVSDSSAQEYRIRAGDLLDVKFFYNSELNEQVTVRPDGRISLQLAND
LMAGGLTPAELTEQLKKKYASEIDNPEITVIVRSFSYQRIFVDGEVFRAGLIPLVGQMTVLQSITQAGGKKDTAYLKGVI
VIRRTPGDKLVTMQLNLEDALDNTDMTQDIALLPNDIVFVPKSTIANVNVWVDQYIRRNIPVSMGLSPF
>Mature_229_residues
MKALCVLQYILIALMLTACATTVNNPVPVQSSIQVSDSSAQEYRIRAGDLLDVKFFYNSELNEQVTVRPDGRISLQLAND
LMAGGLTPAELTEQLKKKYASEIDNPEITVIVRSFSYQRIFVDGEVFRAGLIPLVGQMTVLQSITQAGGKKDTAYLKGVI
VIRRTPGDKLVTMQLNLEDALDNTDMTQDIALLPNDIVFVPKSTIANVNVWVDQYIRRNIPVSMGLSPF

Specific function: Probably involved in the export of the extracellular polysaccharide colanic acid from the cell to medium [H]

COG id: COG1596

COG function: function code M; Periplasmic protein involved in polysaccharide export

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BexD/CtrA/VexA family [H]

Homologues:

Organism=Escherichia coli, GI1788376, Length=180, Percent_Identity=25.5555555555556, Blast_Score=70, Evalue=9e-14,
Organism=Escherichia coli, GI1787218, Length=174, Percent_Identity=27.5862068965517, Blast_Score=66, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003715
- InterPro:   IPR019554 [H]

Pfam domain/function: PF02563 Poly_export; PF10531 SLBB [H]

EC number: NA

Molecular weight: Translated: 25325; Mature: 25325

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKALCVLQYILIALMLTACATTVNNPVPVQSSIQVSDSSAQEYRIRAGDLLDVKFFYNSE
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHEEEECCCEEEEEEEECCC
LNEQVTVRPDGRISLQLANDLMAGGLTPAELTEQLKKKYASEIDNPEITVIVRSFSYQRI
CCCEEEECCCCEEEEEEECHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCEEEE
FVDGEVFRAGLIPLVGQMTVLQSITQAGGKKDTAYLKGVIVIRRTPGDKLVTMQLNLEDA
EECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEECCCCEEEEEEECHHHH
LDNTDMTQDIALLPNDIVFVPKSTIANVNVWVDQYIRRNIPVSMGLSPF
CCCCCCCCHHEECCCCEEEECCCHHCEEHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MKALCVLQYILIALMLTACATTVNNPVPVQSSIQVSDSSAQEYRIRAGDLLDVKFFYNSE
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHEEEECCCEEEEEEEECCC
LNEQVTVRPDGRISLQLANDLMAGGLTPAELTEQLKKKYASEIDNPEITVIVRSFSYQRI
CCCEEEECCCCEEEEEEECHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCEEEE
FVDGEVFRAGLIPLVGQMTVLQSITQAGGKKDTAYLKGVIVIRRTPGDKLVTMQLNLEDA
EECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEECCCCEEEEEEECHHHH
LDNTDMTQDIALLPNDIVFVPKSTIANVNVWVDQYIRRNIPVSMGLSPF
CCCCCCCCHHEECCCCEEEECCCHHCEEHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]