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The map label for this gene is ylbH [H]

Identifier: 118580607

GI number: 118580607

Start: 2363365

End: 2363928

Strand: Reverse

Name: ylbH [H]

Synonym: Ppro_2191

Alternate gene names: 118580607

Gene position: 2363928-2363365 (Counterclockwise)

Preceding gene: 118580612

Following gene: 118580606

Centisome position: 58.98

GC content: 64.18

Gene sequence:

>564_bases
ATGCGCGTGATTGCCGGGAGTGCGCGGGGAACCAGGCTTGCCGCGCCGCGGGGCATGCGAACGCGCCCGACAGCGGATCG
TGTCCGGGAGGCGCTCTTCAGCATCATACAGAGCCGCTATGAACTGGATGGTGCCAGGGTGCTGGATATGTGCGCCGGCA
CCGGCGGACTGGGCATCGAGGCGCTCAGTCGCGGGGCGTCGACCTGCTGTTTTGTCGAGAAGGATCGCGAGGCGCTGAAA
TGCCTCAGGCAGAACCTGCTCGCCACGCGCTGCGCCGAGCGCGCGACCCTGCTGGAGATGGACCTGCTCAGGGCGCTGCC
CCTGTTGGCCGGACGCGGCAGCCGCTTTTCAATCATTTTCTTTGATCCGCCCTATGCCTCGGAACTCTACACGCCGGTGA
TGCGCAGCCTGTCATCCCTGGAATTGCTGGAACCGGAGGGTCTGTTCATCGCCGAGAGCGCGGCCCGTGCCATTCTGCCG
GAGCGCGAGGGATGTCTTGTCAGGAGTGATCGGCGGGTATACGGCGATACTGCGTTGGCATTGTACGTTTTGGGGGAAGA
ATGA

Upstream 100 bases:

>100_bases
CGCAGGGATAAATTTGCGCTGCCGGTCCCCTTCGGCCTTGACGCTCCCCTGCTTTTGGATTAGTTTGCTTTGTTCAAACC
AATGCTGTGGAGTTTTGTTT

Downstream 100 bases:

>100_bases
AGAAAATTGCCGTGTATCCCGGTTCGTTCGATCCGATCACCTATGGCCACCTGGACATCATCAACCGTGGGCTGAAGGTC
TTTGACGAGATTATCGTCGC

Product: putative methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MRVIAGSARGTRLAAPRGMRTRPTADRVREALFSIIQSRYELDGARVLDMCAGTGGLGIEALSRGASTCCFVEKDREALK
CLRQNLLATRCAERATLLEMDLLRALPLLAGRGSRFSIIFFDPPYASELYTPVMRSLSSLELLEPEGLFIAESAARAILP
EREGCLVRSDRRVYGDTALALYVLGEE

Sequences:

>Translated_187_residues
MRVIAGSARGTRLAAPRGMRTRPTADRVREALFSIIQSRYELDGARVLDMCAGTGGLGIEALSRGASTCCFVEKDREALK
CLRQNLLATRCAERATLLEMDLLRALPLLAGRGSRFSIIFFDPPYASELYTPVMRSLSSLELLEPEGLFIAESAARAILP
EREGCLVRSDRRVYGDTALALYVLGEE
>Mature_187_residues
MRVIAGSARGTRLAAPRGMRTRPTADRVREALFSIIQSRYELDGARVLDMCAGTGGLGIEALSRGASTCCFVEKDREALK
CLRQNLLATRCAERATLLEMDLLRALPLLAGRGSRFSIIFFDPPYASELYTPVMRSLSSLELLEPEGLFIAESAARAILP
EREGCLVRSDRRVYGDTALALYVLGEE

Specific function: May catalyze the S-adenosyl-L-methionine-dependent methylation of a specific base in rRNA (Potential) [H]

COG id: COG0742

COG function: function code L; N6-adenine-specific methylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmD family [H]

Homologues:

Organism=Escherichia coli, GI1789875, Length=182, Percent_Identity=35.1648351648352, Blast_Score=90, Evalue=9e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004398 [H]

Pfam domain/function: PF03602 Cons_hypoth95 [H]

EC number: 2.1.1.- [C]

Molecular weight: Translated: 20530; Mature: 20530

Theoretical pI: Translated: 8.10; Mature: 8.10

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVIAGSARGTRLAAPRGMRTRPTADRVREALFSIIQSRYELDGARVLDMCAGTGGLGIE
CCEEECCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCHH
ALSRGASTCCFVEKDREALKCLRQNLLATRCAERATLLEMDLLRALPLLAGRGSRFSIIF
HHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE
FDPPYASELYTPVMRSLSSLELLEPEGLFIAESAARAILPEREGCLVRSDRRVYGDTALA
ECCCCHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHCCCCCCCEEECCCEECCCCEEE
LYVLGEE
EEEECCC
>Mature Secondary Structure
MRVIAGSARGTRLAAPRGMRTRPTADRVREALFSIIQSRYELDGARVLDMCAGTGGLGIE
CCEEECCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCHH
ALSRGASTCCFVEKDREALKCLRQNLLATRCAERATLLEMDLLRALPLLAGRGSRFSIIF
HHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE
FDPPYASELYTPVMRSLSSLELLEPEGLFIAESAARAILPEREGCLVRSDRRVYGDTALA
ECCCCHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHCCCCCCCEEECCCEECCCCEEE
LYVLGEE
EEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Methyltransferases Protein + DNA = Protein-DNA [C]

General reaction: Transferring one-carbon groups [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]