Definition Pelobacter propionicus DSM 2379 chromosome, complete genome.
Accession NC_008609
Length 4,008,000

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The map label for this gene is ybeQ [C]

Identifier: 118580259

GI number: 118580259

Start: 1979876

End: 1980961

Strand: Direct

Name: ybeQ [C]

Synonym: Ppro_1839

Alternate gene names: 118580259

Gene position: 1979876-1980961 (Clockwise)

Preceding gene: 118580258

Following gene: 118580260

Centisome position: 49.4

GC content: 48.25

Gene sequence:

>1086_bases
ATGACAAAAGAGAAGATGCCTCTTTACATCTTGTTGTTTATTGTCCTGCTTCTCGGGGGGTGCAATACTTACAATACCGG
AACTTGCCTGTCTGATAAAGAAATCAAAGAACTCACAGCTAAGGCTGAAAAAGGCGATCTGAATGCAGCTCGCCTCATCG
AAAGTCACTACATGTTCTGCGTCGAAGATCCTAAAATGGCAAGAGTTTGGACCGAAAAGCTTGCAAGTCTCGGGGATGCA
GAAGCATGGTACCACCTTTATTCGGATGACAGAAGCTCCAATGATGCGAATACAAAGAAGAAAGCATTCGCTGAACTTGT
AAAGTCAGGAGAAGGCGGATATGGGTTTGCGCAGATGACCCTAGCTACCAAATACTTTACTGGTGATGAAGTTAACAAGG
ACCACGCACAGGGCGAGGTGTGGCTGCGGCGTGCTGCTCAAGCGGGTAATTCTGATGCCATGCGCTCGATGAGCATTCTT
TTGCTCGTCAAAGAGAGGACAAAAAATTCTATTATTGAGGCCTATAGGCTGTCGCGACATGCACAGAGGGTTGTCGACGA
ACAATCTGTTGCCGGTCAAAGTGCAATGAGGCAAGCAGAAACAATACGTTTGGTTGCCAGAAAATCGCGGATTCCAGAAA
AAGCTTTGGAAGCCGCAACTGCAAAACTCCCAGCGCAAAAGGAACCGAAAGCTAACGCCTCGCCTGAGCGATTTACAGCG
ACAAGCGGAAGTCCACGTGCAAATGCAGAGCTGGCCGACAGGCAATATGCAGCGGGAACTAAAGAGGGGGTTGTGGCGGG
TGAGGGGTTGCTGAAGTCAGCTGCCTTGGCCTGTGACAAATATGCAATGAGTGATTTTGCAACGGTAAGTCTTCTTTCTG
CCACCACTGGAAAATCACTCGCAGAGGCACAATCGTGGGCTAAGCTCGTAATCTTGGATGCACCCGCCTCTTACATGGCG
ACGGACGCAAGAATGAATATGGAATTTATTTCCATAGCGGCTAAATCCTTGGGAATTCCGCAAGCTACCATTTCCGAAGA
GGCAGACAACCTGGTAGCCCAATCGAACTGTAGAAAGTCAAAGTAA

Upstream 100 bases:

>100_bases
GCTGGCTTCTTATACATGAAACTTATCGCCTATATAGGAAACAAGTTTCTTATATAGGGAAACTCATCAATAACACGTTG
TACCTGAATGAAGAATTGAA

Downstream 100 bases:

>100_bases
AGGTCCAACACGCGGTTCGAACACGACTCCCTTCGGTCGCGGTTCAACCGCGGCCCCGTTGGTCTCAACAAATTAAAGGA
ATAAAGAATGAGAATAGATA

Product: Sel1 domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 361; Mature: 360

Protein sequence:

>361_residues
MTKEKMPLYILLFIVLLLGGCNTYNTGTCLSDKEIKELTAKAEKGDLNAARLIESHYMFCVEDPKMARVWTEKLASLGDA
EAWYHLYSDDRSSNDANTKKKAFAELVKSGEGGYGFAQMTLATKYFTGDEVNKDHAQGEVWLRRAAQAGNSDAMRSMSIL
LLVKERTKNSIIEAYRLSRHAQRVVDEQSVAGQSAMRQAETIRLVARKSRIPEKALEAATAKLPAQKEPKANASPERFTA
TSGSPRANAELADRQYAAGTKEGVVAGEGLLKSAALACDKYAMSDFATVSLLSATTGKSLAEAQSWAKLVILDAPASYMA
TDARMNMEFISIAAKSLGIPQATISEEADNLVAQSNCRKSK

Sequences:

>Translated_361_residues
MTKEKMPLYILLFIVLLLGGCNTYNTGTCLSDKEIKELTAKAEKGDLNAARLIESHYMFCVEDPKMARVWTEKLASLGDA
EAWYHLYSDDRSSNDANTKKKAFAELVKSGEGGYGFAQMTLATKYFTGDEVNKDHAQGEVWLRRAAQAGNSDAMRSMSIL
LLVKERTKNSIIEAYRLSRHAQRVVDEQSVAGQSAMRQAETIRLVARKSRIPEKALEAATAKLPAQKEPKANASPERFTA
TSGSPRANAELADRQYAAGTKEGVVAGEGLLKSAALACDKYAMSDFATVSLLSATTGKSLAEAQSWAKLVILDAPASYMA
TDARMNMEFISIAAKSLGIPQATISEEADNLVAQSNCRKSK
>Mature_360_residues
TKEKMPLYILLFIVLLLGGCNTYNTGTCLSDKEIKELTAKAEKGDLNAARLIESHYMFCVEDPKMARVWTEKLASLGDAE
AWYHLYSDDRSSNDANTKKKAFAELVKSGEGGYGFAQMTLATKYFTGDEVNKDHAQGEVWLRRAAQAGNSDAMRSMSILL
LVKERTKNSIIEAYRLSRHAQRVVDEQSVAGQSAMRQAETIRLVARKSRIPEKALEAATAKLPAQKEPKANASPERFTAT
SGSPRANAELADRQYAAGTKEGVVAGEGLLKSAALACDKYAMSDFATVSLLSATTGKSLAEAQSWAKLVILDAPASYMAT
DARMNMEFISIAAKSLGIPQATISEEADNLVAQSNCRKSK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39271; Mature: 39140

Theoretical pI: Translated: 8.65; Mature: 8.65

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKEKMPLYILLFIVLLLGGCNTYNTGTCLSDKEIKELTAKAEKGDLNAARLIESHYMFC
CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCEEE
VEDPKMARVWTEKLASLGDAEAWYHLYSDDRSSNDANTKKKAFAELVKSGEGGYGFAQMT
ECCCHHHHHHHHHHHCCCCHHHHEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHH
LATKYFTGDEVNKDHAQGEVWLRRAAQAGNSDAMRSMSILLLVKERTKNSIIEAYRLSRH
HHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHEEEHHHHHHHHHHHHHHHHH
AQRVVDEQSVAGQSAMRQAETIRLVARKSRIPEKALEAATAKLPAQKEPKANASPERFTA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEC
TSGSPRANAELADRQYAAGTKEGVVAGEGLLKSAALACDKYAMSDFATVSLLSATTGKSL
CCCCCCCCCHHHHHHHCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
AEAQSWAKLVILDAPASYMATDARMNMEFISIAAKSLGIPQATISEEADNLVAQSNCRKS
HHHHCCEEEEEEECCHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCC
K
C
>Mature Secondary Structure 
TKEKMPLYILLFIVLLLGGCNTYNTGTCLSDKEIKELTAKAEKGDLNAARLIESHYMFC
CCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCEEE
VEDPKMARVWTEKLASLGDAEAWYHLYSDDRSSNDANTKKKAFAELVKSGEGGYGFAQMT
ECCCHHHHHHHHHHHCCCCHHHHEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHH
LATKYFTGDEVNKDHAQGEVWLRRAAQAGNSDAMRSMSILLLVKERTKNSIIEAYRLSRH
HHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHEEEHHHHHHHHHHHHHHHHH
AQRVVDEQSVAGQSAMRQAETIRLVARKSRIPEKALEAATAKLPAQKEPKANASPERFTA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEC
TSGSPRANAELADRQYAAGTKEGVVAGEGLLKSAALACDKYAMSDFATVSLLSATTGKSL
CCCCCCCCCHHHHHHHCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
AEAQSWAKLVILDAPASYMATDARMNMEFISIAAKSLGIPQATISEEADNLVAQSNCRKS
HHHHCCEEEEEEECCHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCC
K
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA