| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is pgk
Identifier: 118580115
GI number: 118580115
Start: 1820905
End: 1822104
Strand: Direct
Name: pgk
Synonym: Ppro_1694
Alternate gene names: 118580115
Gene position: 1820905-1822104 (Clockwise)
Preceding gene: 118580114
Following gene: 118580116
Centisome position: 45.43
GC content: 61.08
Gene sequence:
>1200_bases ATGCCGATTCGCTACATCGACCAACTTGCCGACTTGAAGGATAAGAAGGTGTTTATTCGCGTTGACTTCAACGTTCCCCA GGATTCCAAGGGCAACATCACCGAGGATACCCGCATCACCGGAGCCCTGCCGACCATCAGGTACGCCATCGAGCAGGGGG CCAGGGTGATCCTGGCCTCCCATCTGGGGCGCCCCAAGGGGGAGAAGAACGAGAAATACAGCATGGTTCCGGCCGCCAAG CGTCTGTCGGAATTGTTGGGGAGGAAGGTCAAGCAGGCCTCGGACTGCTTCGGCGAAGAGGTGACTCGAGAGATCGATGC CATGAAATCGGGCGAGGTGCTGATGCTGGAGAATGTGCGCTTCTACCCCGGCGAGGAGAAGAACGACCCCAAGTTCGCCC AGCAGTTGGCCAATGGCTGCCAGGTCTACGTCAATGACGCCTTTGCCGTGTCCCATCGCGCCCATGCCTCGGTTGAGGCG ATCACCAGGGTGATTCCCACCGTGGTGGCCGGTTTTCTGATGAGAAACGAGATGACCTTCTTCGACAAGGCCATGCAGAA CCCGGTGCGTCCCCTGGTGGCCATTCTCGGCGGCGCCAAGGTCTCCGGCAAGCTGGAGGTGCTGGAAAAACTGATGAACA AGGTGGACAAGGTGGTGATCGGCGGCGGTATGGCATTCACCTTCCTCAAGTCCATGGGATACTCGGTGGGCGCCTCCAAG GTGGAGGACGAACTGCTCCCCACCGCCAAGAAGATCATGGACAAGGCCAGGAAGAAGGGAATCATGTTCTACCTACCGGT GGACTGCGTGGTGGCCAACGCCTTCGAGGCGAGCGCCACCAACTTCATCACCACCGTCCAGGAGATCCCCGAGGGGTGGC TGGCGCTGGATATCGGACCGGCGTCGGCAACGCTCTTCACCGAGACCCTGCGTGACGCCAAGACCGTCATCTGGAACGGC CCCATGGGAGTCTTCGAGATGGACGCCTTTGCCCGCGGCACCTTTGCCGTGGCCGAGGCGGTGGCAAGCGCCTTCGCCAC CACCATCATCGGCGGCGGCGACACCGATTCCGCCGTACGCAAGGCGGGGGTGGAGAGCAAGGTCAGCTACATTTCCACCG GCGGTGGCGCGTTCCTGGAGCTGCTGGAGGGCAAGGTTCTGCCCGGCGTGAAGGCGCTGGACATCAAGGTCAAGAAATAG
Upstream 100 bases:
>100_bases GCATCGAAAAAGTAGTCTTTTGCCGCTGATATTCGAGGGGGAACTCGCGTTTCTCCCTCTTTTTTTGTGATACCCATTCC ATGCCCCAAGGAGGAGCCCC
Downstream 100 bases:
>100_bases GGGGGAGTCCATGCGCACGCCGCTGATCGCAGGAAACTGGAAACTGCACAAGACCATTGCCGAGTCGTTGGCCATGGTGG ATGAACTGAAACCGCTGGTG
Product: phosphoglycerate kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 399; Mature: 398
Protein sequence:
>399_residues MPIRYIDQLADLKDKKVFIRVDFNVPQDSKGNITEDTRITGALPTIRYAIEQGARVILASHLGRPKGEKNEKYSMVPAAK RLSELLGRKVKQASDCFGEEVTREIDAMKSGEVLMLENVRFYPGEEKNDPKFAQQLANGCQVYVNDAFAVSHRAHASVEA ITRVIPTVVAGFLMRNEMTFFDKAMQNPVRPLVAILGGAKVSGKLEVLEKLMNKVDKVVIGGGMAFTFLKSMGYSVGASK VEDELLPTAKKIMDKARKKGIMFYLPVDCVVANAFEASATNFITTVQEIPEGWLALDIGPASATLFTETLRDAKTVIWNG PMGVFEMDAFARGTFAVAEAVASAFATTIIGGGDTDSAVRKAGVESKVSYISTGGGAFLELLEGKVLPGVKALDIKVKK
Sequences:
>Translated_399_residues MPIRYIDQLADLKDKKVFIRVDFNVPQDSKGNITEDTRITGALPTIRYAIEQGARVILASHLGRPKGEKNEKYSMVPAAK RLSELLGRKVKQASDCFGEEVTREIDAMKSGEVLMLENVRFYPGEEKNDPKFAQQLANGCQVYVNDAFAVSHRAHASVEA ITRVIPTVVAGFLMRNEMTFFDKAMQNPVRPLVAILGGAKVSGKLEVLEKLMNKVDKVVIGGGMAFTFLKSMGYSVGASK VEDELLPTAKKIMDKARKKGIMFYLPVDCVVANAFEASATNFITTVQEIPEGWLALDIGPASATLFTETLRDAKTVIWNG PMGVFEMDAFARGTFAVAEAVASAFATTIIGGGDTDSAVRKAGVESKVSYISTGGGAFLELLEGKVLPGVKALDIKVKK >Mature_398_residues PIRYIDQLADLKDKKVFIRVDFNVPQDSKGNITEDTRITGALPTIRYAIEQGARVILASHLGRPKGEKNEKYSMVPAAKR LSELLGRKVKQASDCFGEEVTREIDAMKSGEVLMLENVRFYPGEEKNDPKFAQQLANGCQVYVNDAFAVSHRAHASVEAI TRVIPTVVAGFLMRNEMTFFDKAMQNPVRPLVAILGGAKVSGKLEVLEKLMNKVDKVVIGGGMAFTFLKSMGYSVGASKV EDELLPTAKKIMDKARKKGIMFYLPVDCVVANAFEASATNFITTVQEIPEGWLALDIGPASATLFTETLRDAKTVIWNGP MGVFEMDAFARGTFAVAEAVASAFATTIIGGGDTDSAVRKAGVESKVSYISTGGGAFLELLEGKVLPGVKALDIKVKK
Specific function: Second phase of glycolysis; second step. [C]
COG id: COG0126
COG function: function code G; 3-phosphoglycerate kinase
Gene ontology:
Cell location: Cytoplasm (Potential)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoglycerate kinase family
Homologues:
Organism=Homo sapiens, GI4505763, Length=410, Percent_Identity=45.3658536585366, Blast_Score=334, Evalue=1e-91, Organism=Homo sapiens, GI31543397, Length=410, Percent_Identity=44.1463414634146, Blast_Score=330, Evalue=1e-90, Organism=Escherichia coli, GI1789294, Length=391, Percent_Identity=43.7340153452685, Blast_Score=309, Evalue=2e-85, Organism=Caenorhabditis elegans, GI17508823, Length=409, Percent_Identity=45.4767726161369, Blast_Score=348, Evalue=2e-96, Organism=Saccharomyces cerevisiae, GI6319857, Length=412, Percent_Identity=49.2718446601942, Blast_Score=368, Evalue=1e-103, Organism=Drosophila melanogaster, GI24581203, Length=405, Percent_Identity=43.2098765432099, Blast_Score=317, Evalue=8e-87, Organism=Drosophila melanogaster, GI17136394, Length=404, Percent_Identity=44.5544554455446, Blast_Score=315, Evalue=2e-86,
Paralogues:
None
Copy number: 2990 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1460 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). [C]
Swissprot (AC and ID): PGK_PELPD (A1APN7)
Other databases:
- EMBL: CP000482 - RefSeq: YP_901365.1 - ProteinModelPortal: A1APN7 - SMR: A1APN7 - STRING: A1APN7 - GeneID: 4572429 - GenomeReviews: CP000482_GR - KEGG: ppd:Ppro_1694 - eggNOG: COG0126 - HOGENOM: HBG453500 - OMA: NCAIILP - PhylomeDB: A1APN7 - ProtClustDB: PRK00073 - GO: GO:0005737 - GO: GO:0006096 - HAMAP: MF_00145 - InterPro: IPR001576 - InterPro: IPR015901 - InterPro: IPR015911 - InterPro: IPR015824 - Gene3D: G3DSA:3.40.50.1270 - Gene3D: G3DSA:3.40.50.1260 - PANTHER: PTHR11406 - PIRSF: PIRSF000724 - PRINTS: PR00477
Pfam domain/function: PF00162 PGK; SSF53748 PGK
EC number: =2.7.2.3
Molecular weight: Translated: 43270; Mature: 43139
Theoretical pI: Translated: 8.97; Mature: 8.97
Prosite motif: PS00111 PGLYCERATE_KINASE
Important sites: BINDING 38-38 BINDING 120-120 BINDING 153-153 BINDING 204-204 BINDING 326-326
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIRYIDQLADLKDKKVFIRVDFNVPQDSKGNITEDTRITGALPTIRYAIEQGARVILAS CCCHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCEECCCHHHHHHHHHHCCCEEEHH HLGRPKGEKNEKYSMVPAAKRLSELLGRKVKQASDCFGEEVTREIDAMKSGEVLMLENVR HCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECEE FYPGEEKNDPKFAQQLANGCQVYVNDAFAVSHRAHASVEAITRVIPTVVAGFLMRNEMTF ECCCCCCCCHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH FDKAMQNPVRPLVAILGGAKVSGKLEVLEKLMNKVDKVVIGGGMAFTFLKSMGYSVGASK HHHHHHCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHEEECCCHHHHHHHHHCCCCCCHH VEDELLPTAKKIMDKARKKGIMFYLPVDCVVANAFEASATNFITTVQEIPEGWLALDIGP HHHHHHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECC ASATLFTETLRDAKTVIWNGPMGVFEMDAFARGTFAVAEAVASAFATTIIGGGDTDSAVR CHHHHHHHHHHHCCEEEECCCCCCEEHHHHHCHHHHHHHHHHHHHHHHHCCCCCCHHHHH KAGVESKVSYISTGGGAFLELLEGKVLPGVKALDIKVKK HHCCHHHHHHEECCCHHHHHHHCCCCCCCCEEEEEEECC >Mature Secondary Structure PIRYIDQLADLKDKKVFIRVDFNVPQDSKGNITEDTRITGALPTIRYAIEQGARVILAS CCHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCEECCCHHHHHHHHHHCCCEEEHH HLGRPKGEKNEKYSMVPAAKRLSELLGRKVKQASDCFGEEVTREIDAMKSGEVLMLENVR HCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECEE FYPGEEKNDPKFAQQLANGCQVYVNDAFAVSHRAHASVEAITRVIPTVVAGFLMRNEMTF ECCCCCCCCHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH FDKAMQNPVRPLVAILGGAKVSGKLEVLEKLMNKVDKVVIGGGMAFTFLKSMGYSVGASK HHHHHHCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHEEECCCHHHHHHHHHCCCCCCHH VEDELLPTAKKIMDKARKKGIMFYLPVDCVVANAFEASATNFITTVQEIPEGWLALDIGP HHHHHHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECC ASATLFTETLRDAKTVIWNGPMGVFEMDAFARGTFAVAEAVASAFATTIIGGGDTDSAVR CHHHHHHHHHHHCCEEEECCCCCCEEHHHHHCHHHHHHHHHHHHHHHHHCCCCCCHHHHH KAGVESKVSYISTGGGAFLELLEGKVLPGVKALDIKVKK HHCCHHHHHHEECCCHHHHHHHCCCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA