Click here to switch to the map view.

The map label for this gene is gap [H]

Identifier: 118580114

GI number: 118580114

Start: 1820622

End: 1820819

Strand: Direct

Name: gap [H]

Synonym: Ppro_1693

Alternate gene names: 118580114

Gene position: 1820622-1820819 (Clockwise)

Preceding gene: 118580113

Following gene: 118580115

Centisome position: 45.42

GC content: 54.55

Gene sequence:

>198_bases
ATGGGAATCCTGGGCATCCGCGATGTGCCGCTGGTTTCCATCGACTACAACGGCAATCCGCTCTCGTCCATAGTCGAAGC
CTCCTGCACCAGGGTGATCGGCGACAACATGGTCAAGGTCATCTCCTGGTATGACAACGAGACCGGTTTCTCCCATCGAT
TGATCGACCTGCTTGAGCTGATCGCATCGAAAAAGTAG

Upstream 100 bases:

>100_bases
GTTTCCGTGGGGCTCCGCTCCGTGGTGCCGCATTATCTGGTTGACGATTCTTATTTATGTTTTATTATCTTCATGAGTTT
GGGCGTGGCGGAACTCCCTC

Downstream 100 bases:

>100_bases
TCTTTTGCCGCTGATATTCGAGGGGGAACTCGCGTTTCTCCCTCTTTTTTTGTGATACCCATTCCATGCCCCAAGGAGGA
GCCCCATGCCGATTCGCTAC

Product: glyceraldehyde-3-phosphate dehydrogenase, type I

Products: NA

Alternate protein names: GAPDH [H]

Number of amino acids: Translated: 65; Mature: 64

Protein sequence:

>65_residues
MGILGIRDVPLVSIDYNGNPLSSIVEASCTRVIGDNMVKVISWYDNETGFSHRLIDLLELIASKK

Sequences:

>Translated_65_residues
MGILGIRDVPLVSIDYNGNPLSSIVEASCTRVIGDNMVKVISWYDNETGFSHRLIDLLELIASKK
>Mature_64_residues
GILGIRDVPLVSIDYNGNPLSSIVEASCTRVIGDNMVKVISWYDNETGFSHRLIDLLELIASKK

Specific function: Second phase of glycolysis; first step. [C]

COG id: COG0057

COG function: function code G; Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glyceraldehyde-3-phosphate dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI7657116, Length=63, Percent_Identity=47.6190476190476, Blast_Score=64, Evalue=3e-11,
Organism=Escherichia coli, GI1788079, Length=61, Percent_Identity=42.6229508196721, Blast_Score=62, Evalue=1e-11,
Organism=Escherichia coli, GI1789295, Length=55, Percent_Identity=45.4545454545455, Blast_Score=61, Evalue=1e-11,
Organism=Drosophila melanogaster, GI19922412, Length=57, Percent_Identity=50.8771929824561, Blast_Score=65, Evalue=1e-11,

Paralogues:

None

Copy number: 220 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1840 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 740 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1660 Molecules/Cell In: Growth Phase, Min

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020831
- InterPro:   IPR020830
- InterPro:   IPR020829
- InterPro:   IPR020828
- InterPro:   IPR006424
- InterPro:   IPR016040 [H]

Pfam domain/function: PF02800 Gp_dh_C; PF00044 Gp_dh_N [H]

EC number: =1.2.1.12 [H]

Molecular weight: Translated: 7178; Mature: 7047

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGILGIRDVPLVSIDYNGNPLSSIVEASCTRVIGDNMVKVISWYDNETGFSHRLIDLLEL
CCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHH
IASKK
HHCCC
>Mature Secondary Structure 
GILGIRDVPLVSIDYNGNPLSSIVEASCTRVIGDNMVKVISWYDNETGFSHRLIDLLEL
CCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHH
IASKK
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2684782; 2227448; 2656407; 7408868; 193030; 3586018; 9175858 [H]