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The map label for this gene is scpA [H]

Identifier: 118580109

GI number: 118580109

Start: 1815033

End: 1815851

Strand: Direct

Name: scpA [H]

Synonym: Ppro_1688

Alternate gene names: 118580109

Gene position: 1815033-1815851 (Clockwise)

Preceding gene: 118580108

Following gene: 118580110

Centisome position: 45.29

GC content: 59.83

Gene sequence:

>819_bases
ATGAGTTCCACCAGCGGCCAGCAGGAGGAGAACCTTCCCCTGGAGGGTTTCCAGGATGTCTACCACGTGCGCCTGGACAA
GTTCGACGGTCCCCTGGATCTCCTGCTGCATCTGATCAGGAAGAACGAACTGGACATCCGCGACATCCCCATCGCCGACA
TCACCCGCCAGTACCTGGAATACATCAGGCTGATGAAGGATCTGAACCTGGATGTGGCCGGTGATTTCCTGCTCATGGCC
TCCACGTTGCTCCAGATCAAATCTGCAATGCTGCTCCCCCTGGACGAGCAGGAGCAGGAGGGGGACGAGGAGGCAGACCC
GCGCGCCGAACTGGTGCGGCGCCTCCTTGAGTACCAGCGCTACAAGGAGGCCGGCACTTTGATGGGAGCACGGGCGCTGC
TGGGGCGGGAGGTGTTCACCCGCCCCTTCTGCGAATCCGAGATTGTGGCTGCCCACCAGGAAGAGGGACCGCTTGAGCTT
GAACTCTTCGACCTGGTGGATGCCTTCCGCTCGCTTTTGAGCCGCATACCGGTGGAGAGCTTCCACGAGGTGGCTGCCGC
GGATGTCCTGAGCATCGCCGACAGCATCAACGAGATCCTGGGGCTGCTCCAGGAACGGGAGATGATTGCATTTGACGAAC
TTGTCAGGGATGACTTCACCCGCGAACGGGTGATTGTAACCTTCCTGGCTCTGCTTGAACTGTGCCGGCTCAGGATGATC
CGAATCTACCAGAATCGGGACCAGGGCAGTATCTGGTTCCTTCCCGCCGTGGTTGAAGTAGCCGACGACGAGAGCGTCGC
GGACATATCTGCTATCTAG

Upstream 100 bases:

>100_bases
GACAACCTCCTCCACAATGGCAGCAAACGGGCGTCCGTCATCTCCGATGCCGTCATGGCGGAGGCTCGCGCAGCCCTGAA
GCTGTGAGACCGGACAATCC

Downstream 100 bases:

>100_bases
AGGAGGCGTACCATGCTTAAGGAATTCAAGGAGTTCGCAATCAGGGGGAACGTCATTGACCTGGCAATCGGTATCATCAT
CGGTGGCGCGTTCGGCAAGA

Product: chromosome segregation and condensation protein ScpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 272; Mature: 271

Protein sequence:

>272_residues
MSSTSGQQEENLPLEGFQDVYHVRLDKFDGPLDLLLHLIRKNELDIRDIPIADITRQYLEYIRLMKDLNLDVAGDFLLMA
STLLQIKSAMLLPLDEQEQEGDEEADPRAELVRRLLEYQRYKEAGTLMGARALLGREVFTRPFCESEIVAAHQEEGPLEL
ELFDLVDAFRSLLSRIPVESFHEVAAADVLSIADSINEILGLLQEREMIAFDELVRDDFTRERVIVTFLALLELCRLRMI
RIYQNRDQGSIWFLPAVVEVADDESVADISAI

Sequences:

>Translated_272_residues
MSSTSGQQEENLPLEGFQDVYHVRLDKFDGPLDLLLHLIRKNELDIRDIPIADITRQYLEYIRLMKDLNLDVAGDFLLMA
STLLQIKSAMLLPLDEQEQEGDEEADPRAELVRRLLEYQRYKEAGTLMGARALLGREVFTRPFCESEIVAAHQEEGPLEL
ELFDLVDAFRSLLSRIPVESFHEVAAADVLSIADSINEILGLLQEREMIAFDELVRDDFTRERVIVTFLALLELCRLRMI
RIYQNRDQGSIWFLPAVVEVADDESVADISAI
>Mature_271_residues
SSTSGQQEENLPLEGFQDVYHVRLDKFDGPLDLLLHLIRKNELDIRDIPIADITRQYLEYIRLMKDLNLDVAGDFLLMAS
TLLQIKSAMLLPLDEQEQEGDEEADPRAELVRRLLEYQRYKEAGTLMGARALLGREVFTRPFCESEIVAAHQEEGPLELE
LFDLVDAFRSLLSRIPVESFHEVAAADVLSIADSINEILGLLQEREMIAFDELVRDDFTRERVIVTFLALLELCRLRMIR
IYQNRDQGSIWFLPAVVEVADDESVADISAI

Specific function: Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing smc and scpB that pull DNA away from mid-cell into both cell halves [H]

COG id: COG1354

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm. Note=Associated with two foci at the outer edges of the nucleoid region in young cells, and at four foci within both cell halves in older cells (By similarity) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003768 [H]

Pfam domain/function: PF02616 ScpA_ScpB [H]

EC number: NA

Molecular weight: Translated: 31137; Mature: 31006

Theoretical pI: Translated: 4.15; Mature: 4.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSTSGQQEENLPLEGFQDVYHVRLDKFDGPLDLLLHLIRKNELDIRDIPIADITRQYLE
CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
YIRLMKDLNLDVAGDFLLMASTLLQIKSAMLLPLDEQEQEGDEEADPRAELVRRLLEYQR
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCHHHHHHHHHHHHH
YKEAGTLMGARALLGREVFTRPFCESEIVAAHQEEGPLELELFDLVDAFRSLLSRIPVES
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHH
FHEVAAADVLSIADSINEILGLLQEREMIAFDELVRDDFTRERVIVTFLALLELCRLRMI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RIYQNRDQGSIWFLPAVVEVADDESVADISAI
HHHHCCCCCCEEEHHHHHHHCCCCCCHHHCCC
>Mature Secondary Structure 
SSTSGQQEENLPLEGFQDVYHVRLDKFDGPLDLLLHLIRKNELDIRDIPIADITRQYLE
CCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
YIRLMKDLNLDVAGDFLLMASTLLQIKSAMLLPLDEQEQEGDEEADPRAELVRRLLEYQR
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCHHHHHHHHHHHHH
YKEAGTLMGARALLGREVFTRPFCESEIVAAHQEEGPLELELFDLVDAFRSLLSRIPVES
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHH
FHEVAAADVLSIADSINEILGLLQEREMIAFDELVRDDFTRERVIVTFLALLELCRLRMI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RIYQNRDQGSIWFLPAVVEVADDESVADISAI
HHHHCCCCCCEEEHHHHHHHCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA