Definition Pelobacter propionicus DSM 2379 chromosome, complete genome.
Accession NC_008609
Length 4,008,000

Click here to switch to the map view.

The map label for this gene is 118579944

Identifier: 118579944

GI number: 118579944

Start: 1625263

End: 1626588

Strand: Reverse

Name: 118579944

Synonym: Ppro_1521

Alternate gene names: NA

Gene position: 1626588-1625263 (Counterclockwise)

Preceding gene: 118579945

Following gene: 118579943

Centisome position: 40.58

GC content: 67.72

Gene sequence:

>1326_bases
ATGCAACAGCAGACAAGCAGGCAGAAGAGCGCCACAATCCGCATCCCCTTCAGCGCCCCCTTCCTCCCCCTGGCCATGGA
ATTCGCCGAGCGCGGGGCGCATGGCTTCGGTTATGGCGACCGGGAAGCCACCGGGCTGGTGCTGGCGGTGGAGGAACTGT
TCTCCTTCTACAGCCGCCGGGCAGCCGCGGATTCCACGGCTGAGATCGAACTGGAGGACCAGGGCTACCGCCTGTGCCTC
ACCCTCTCCTTCGCCACCGCCAACCCGGACATGCGCGCCTTCAACCTGACCTGGCGGGTTAGCCATGACAGCGAGGAATC
GCTGGACATGCTGGGGCCGATGATCGCCGCCCGCAGCGTATCCAGCCTGCGCCTGGACTTTGGCGGCAACGAACGGGTGG
CGATCCGCATGACCCGCGACCGGGACTACCCGGCAGTCGGCGCCGCGGAACTCCCGCCTGCCGATCTTATCGGCACGGTC
CGCCTGAGCTCCCCCACGGCAGACGACCTGCGGCATTTCGCCGCCATGGTGACCGCCTCCGCCTCCCCGTTCACCCCCCT
CTTCCTGGCCCGCCCGGGCATGGCGGCCGACATGCTGGCGGCCGGCCACTTAAACGCGCTTTTGGCAATGAGTAACGACT
GGATCGTCGGCGGCGTACTCTGGCGGCCGCTGACGGAAACCTGCACAGAACTGTTCGGTCCCTACCTGTTCACCTGCGAC
CCGGAAGACCGCACCCTGACCATGCTGATGGACGAGGCCTTCGGACGCATCTCCCACTCCCGCTCGCGGGGGTTGCTGCG
GCGCCAGGGGCCGCTGCCGGACCACGAGCGTTTCTTCGATTTCCTGGGGGACCTGGAGATGGCCGGCTCCAGCGGAGACG
CCAGCCACTGCACCTACTACTACCGCCAGCTGAGGGAGGAGAGCGGCGGGGTGGTCTACTGCGGCGGGACCCTGGGCGCC
TTCCTGGCCGAGCAGTACGACCGGCTCTGCCTCCCCCGTCAGATACGGGAAACGGGCGGCAGCCTCAACCGTTTGCGCGA
CGCCTCGGTGCTGGCGGTGGAACTGGACTGCCCCCGCTCCCTGGCTATCATTCGCCCCCTCTGCGCCGGCCGGGACATGG
CCGACAACCTGTCCGCCCATCTGCAGCTCCTGGGTGAGGAGGGGATCGGCAACTTCATCGTCGAAATAAACAGCGGACGC
AGCGAGGACACCGCCTTCGCCGATGCCCTGGAGCAGACCGGCTTTGTGCCGCGCCTGCTGGTGCCGGACGCGGGCCAGGG
CGACCTGGTGGTGTACGACCATTCCGGCGGGAACGGGCAGCCATGA

Upstream 100 bases:

>100_bases
AAGGTCCACTCCAGCCGTGGCCGCAGCCTGCTGGAGCTGGTCAGGCGGGACCATGGGCGGAAGGAACTATGAGGCGCCTG
AACATTTGAGAGGCTCATCC

Downstream 100 bases:

>100_bases
ACCTGGACACCCTGGTCCCCGACTATGTTCGCTGTTTCCAGGCCTACGTCCCCAGCAGGCCCGACCACCTGCTGATGCGT
GAGTACGGCGCCCCCCTGCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 441; Mature: 441

Protein sequence:

>441_residues
MQQQTSRQKSATIRIPFSAPFLPLAMEFAERGAHGFGYGDREATGLVLAVEELFSFYSRRAAADSTAEIELEDQGYRLCL
TLSFATANPDMRAFNLTWRVSHDSEESLDMLGPMIAARSVSSLRLDFGGNERVAIRMTRDRDYPAVGAAELPPADLIGTV
RLSSPTADDLRHFAAMVTASASPFTPLFLARPGMAADMLAAGHLNALLAMSNDWIVGGVLWRPLTETCTELFGPYLFTCD
PEDRTLTMLMDEAFGRISHSRSRGLLRRQGPLPDHERFFDFLGDLEMAGSSGDASHCTYYYRQLREESGGVVYCGGTLGA
FLAEQYDRLCLPRQIRETGGSLNRLRDASVLAVELDCPRSLAIIRPLCAGRDMADNLSAHLQLLGEEGIGNFIVEINSGR
SEDTAFADALEQTGFVPRLLVPDAGQGDLVVYDHSGGNGQP

Sequences:

>Translated_441_residues
MQQQTSRQKSATIRIPFSAPFLPLAMEFAERGAHGFGYGDREATGLVLAVEELFSFYSRRAAADSTAEIELEDQGYRLCL
TLSFATANPDMRAFNLTWRVSHDSEESLDMLGPMIAARSVSSLRLDFGGNERVAIRMTRDRDYPAVGAAELPPADLIGTV
RLSSPTADDLRHFAAMVTASASPFTPLFLARPGMAADMLAAGHLNALLAMSNDWIVGGVLWRPLTETCTELFGPYLFTCD
PEDRTLTMLMDEAFGRISHSRSRGLLRRQGPLPDHERFFDFLGDLEMAGSSGDASHCTYYYRQLREESGGVVYCGGTLGA
FLAEQYDRLCLPRQIRETGGSLNRLRDASVLAVELDCPRSLAIIRPLCAGRDMADNLSAHLQLLGEEGIGNFIVEINSGR
SEDTAFADALEQTGFVPRLLVPDAGQGDLVVYDHSGGNGQP
>Mature_441_residues
MQQQTSRQKSATIRIPFSAPFLPLAMEFAERGAHGFGYGDREATGLVLAVEELFSFYSRRAAADSTAEIELEDQGYRLCL
TLSFATANPDMRAFNLTWRVSHDSEESLDMLGPMIAARSVSSLRLDFGGNERVAIRMTRDRDYPAVGAAELPPADLIGTV
RLSSPTADDLRHFAAMVTASASPFTPLFLARPGMAADMLAAGHLNALLAMSNDWIVGGVLWRPLTETCTELFGPYLFTCD
PEDRTLTMLMDEAFGRISHSRSRGLLRRQGPLPDHERFFDFLGDLEMAGSSGDASHCTYYYRQLREESGGVVYCGGTLGA
FLAEQYDRLCLPRQIRETGGSLNRLRDASVLAVELDCPRSLAIIRPLCAGRDMADNLSAHLQLLGEEGIGNFIVEINSGR
SEDTAFADALEQTGFVPRLLVPDAGQGDLVVYDHSGGNGQP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48177; Mature: 48177

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQQTSRQKSATIRIPFSAPFLPLAMEFAERGAHGFGYGDREATGLVLAVEELFSFYSRR
CCCHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEHHHHHHHHHHH
AAADSTAEIELEDQGYRLCLTLSFATANPDMRAFNLTWRVSHDSEESLDMLGPMIAARSV
HCCCCCEEEEECCCCEEEEEEEEEEECCCCCEEEEEEEEECCCCHHHHHHHHHHHHHCCC
SSLRLDFGGNERVAIRMTRDRDYPAVGAAELPPADLIGTVRLSSPTADDLRHFAAMVTAS
CCEEEECCCCCEEEEEEECCCCCCCCCCCCCCCHHCEEEEEECCCCHHHHHHHHHHHHCC
ASPFTPLFLARPGMAADMLAAGHLNALLAMSNDWIVGGVLWRPLTETCTELFGPYLFTCD
CCCCCEEEEECCCCHHHHHHHHHHHEEEEECCCEEEEHHHHCCHHHHHHHHCCCEEEEEC
PEDRTLTMLMDEAFGRISHSRSRGLLRRQGPLPDHERFFDFLGDLEMAGSSGDASHCTYY
CCCCEEEHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHCCHHCCCCCCCCHHHHHH
YRQLREESGGVVYCGGTLGAFLAEQYDRLCLPRQIRETGGSLNRLRDASVLAVELDCPRS
HHHHHHCCCCEEEECHHHHHHHHHHHHHHCCCHHHHHCCCHHHHCCCCEEEEEEECCCCC
LAIIRPLCAGRDMADNLSAHLQLLGEEGIGNFIVEINSGRSEDTAFADALEQTGFVPRLL
HHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCEEE
VPDAGQGDLVVYDHSGGNGQP
CCCCCCCCEEEEECCCCCCCC
>Mature Secondary Structure
MQQQTSRQKSATIRIPFSAPFLPLAMEFAERGAHGFGYGDREATGLVLAVEELFSFYSRR
CCCHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEHHHHHHHHHHH
AAADSTAEIELEDQGYRLCLTLSFATANPDMRAFNLTWRVSHDSEESLDMLGPMIAARSV
HCCCCCEEEEECCCCEEEEEEEEEEECCCCCEEEEEEEEECCCCHHHHHHHHHHHHHCCC
SSLRLDFGGNERVAIRMTRDRDYPAVGAAELPPADLIGTVRLSSPTADDLRHFAAMVTAS
CCEEEECCCCCEEEEEEECCCCCCCCCCCCCCCHHCEEEEEECCCCHHHHHHHHHHHHCC
ASPFTPLFLARPGMAADMLAAGHLNALLAMSNDWIVGGVLWRPLTETCTELFGPYLFTCD
CCCCCEEEEECCCCHHHHHHHHHHHEEEEECCCEEEEHHHHCCHHHHHHHHCCCEEEEEC
PEDRTLTMLMDEAFGRISHSRSRGLLRRQGPLPDHERFFDFLGDLEMAGSSGDASHCTYY
CCCCEEEHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHCCHHCCCCCCCCHHHHHH
YRQLREESGGVVYCGGTLGAFLAEQYDRLCLPRQIRETGGSLNRLRDASVLAVELDCPRS
HHHHHHCCCCEEEECHHHHHHHHHHHHHHCCCHHHHHCCCHHHHCCCCEEEEEEECCCCC
LAIIRPLCAGRDMADNLSAHLQLLGEEGIGNFIVEINSGRSEDTAFADALEQTGFVPRLL
HHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCEEE
VPDAGQGDLVVYDHSGGNGQP
CCCCCCCCEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA