Click here to switch to the map view.

The map label for this gene is 118579865

Identifier: 118579865

GI number: 118579865

Start: 1541897

End: 1542289

Strand: Reverse

Name: 118579865

Synonym: Ppro_1441

Alternate gene names: NA

Gene position: 1542289-1541897 (Counterclockwise)

Preceding gene: 118579868

Following gene: 118579864

Centisome position: 38.48

GC content: 62.34

Gene sequence:

>393_bases
ATGCAGCATGATGATCCGGAAGTTTCCACCCAGCCGGGAGCCATCGACTGGAGCGTGCTCGACAGCATGAAGATGTTCCA
GCAACCGGGAAAACCGGACCTGCGGAAGCAGTTGATGTCCCTCTACCTCAGCTCATCGCCGGAACTCATGCAGGGAATCA
GGAACTCTGTCGCCACGCTGGACGGGCAGGCGCTCATGCACGCGGCCCATGCCCTCAAATCCAGCAGCATGAGCCTTGGC
GCAACGACGCTCTCCGAACAGTGTTCCTCCCTTGAACAGCTCGGACGGGCCAAGACCCTTGACAACGCGCCGGCCCTGCT
GGATCGGGCCGAGACCGAATTCGCCGCCGTCTGCTCCGCCTTCCGCCAGGCCCTTGACGTGGATGTCCCGTAG

Upstream 100 bases:

>100_bases
ACCTCCGGCAGGGGCGGATTTGCTCTAAAGTATCCGCCTTCAGAACCGAATAACTACTATATTTTGCAGGAAAGGAACAT
CCGTGAAAGGAGCGACCGCC

Downstream 100 bases:

>100_bases
ACGCCCGTCGGCAAGATCCGCCAACACTCCAGCCAGTCGACATTTCTTCCAGCAACACGCACCTCCACAACCTGTTTGCC
ATCGAGATGACGGATCCCGC

Product: Hpt protein

Products: NA

Alternate protein names: PAS Fold Family; Hybrid Histidine Kinase; Sensor/Response Hybrid; Hpt Protein; Response Regulator; Hpt Domain-Containing Protein; Sensory Box Histidine Kinase/Response Regulator

Number of amino acids: Translated: 130; Mature: 130

Protein sequence:

>130_residues
MQHDDPEVSTQPGAIDWSVLDSMKMFQQPGKPDLRKQLMSLYLSSSPELMQGIRNSVATLDGQALMHAAHALKSSSMSLG
ATTLSEQCSSLEQLGRAKTLDNAPALLDRAETEFAAVCSAFRQALDVDVP

Sequences:

>Translated_130_residues
MQHDDPEVSTQPGAIDWSVLDSMKMFQQPGKPDLRKQLMSLYLSSSPELMQGIRNSVATLDGQALMHAAHALKSSSMSLG
ATTLSEQCSSLEQLGRAKTLDNAPALLDRAETEFAAVCSAFRQALDVDVP
>Mature_130_residues
MQHDDPEVSTQPGAIDWSVLDSMKMFQQPGKPDLRKQLMSLYLSSSPELMQGIRNSVATLDGQALMHAAHALKSSSMSLG
ATTLSEQCSSLEQLGRAKTLDNAPALLDRAETEFAAVCSAFRQALDVDVP

Specific function: Unknown

COG id: COG2198

COG function: function code T; FOG: HPt domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14035; Mature: 14035

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: PS50894 HPT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQHDDPEVSTQPGAIDWSVLDSMKMFQQPGKPDLRKQLMSLYLSSSPELMQGIRNSVATL
CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHC
DGQALMHAAHALKSSSMSLGATTLSEQCSSLEQLGRAKTLDNAPALLDRAETEFAAVCSA
CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
FRQALDVDVP
HHHHHCCCCC
>Mature Secondary Structure
MQHDDPEVSTQPGAIDWSVLDSMKMFQQPGKPDLRKQLMSLYLSSSPELMQGIRNSVATL
CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHC
DGQALMHAAHALKSSSMSLGATTLSEQCSSLEQLGRAKTLDNAPALLDRAETEFAAVCSA
CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
FRQALDVDVP
HHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA