Definition Pelobacter propionicus DSM 2379 chromosome, complete genome.
Accession NC_008609
Length 4,008,000

Click here to switch to the map view.

The map label for this gene is 118579636

Identifier: 118579636

GI number: 118579636

Start: 1259106

End: 1259636

Strand: Direct

Name: 118579636

Synonym: Ppro_1207

Alternate gene names: NA

Gene position: 1259106-1259636 (Clockwise)

Preceding gene: 118579635

Following gene: 118579637

Centisome position: 31.41

GC content: 61.21

Gene sequence:

>531_bases
ATGACAATACAAAGAAGGTTGACCGGATTCCCCCGGCGCTGCAAGGCGCCGCTGCGGGGACCGCGCCCCCCCATGACATT
GCGTTACGCCATCTGGAGCTTCCTCAGCGGTACGCTGGGGATACTGGCTATTTTCGAGATTACCTCACTGGTTGGCCAGC
CACTGCTGATCGGCTCGTTCGGTGCGTCGGCGGTGCTGCTGTTTGGCGCAACGGAGTCGCCGCTGGCTCAGCCGCGAAAT
CTGGTGGGAGGGCATCTCGTCTCGGCAACGGTGGCGGTGATTGTGGTCGCCCTGTTCGGTTCCACCCCTCTTACCATTGC
TTTCGGGGTAGGGTTGGCCATCTTTGCCATGAACCTGACCCACACGACCCACCCACCGGGGGGAGCGACCGCCCTGATCG
GCGTACAGGGCGCGGTCGGACCTGGATTCATCCTGGTTCCGGTTCTGGCCGGTGCCCTTATTCTGCTGGTTACCGCACTC
TTTACCAACAATGTCGTCTACCATCGCAGATACCCCAGGCACTGGTTATGA

Upstream 100 bases:

>100_bases
CCCTGCTATCGGCACCTCATCCTGCTTGTCCCGTACCTGATTCACTGAAGCGGCATCGATTTCCGCGTGGACCACAGGCC
CGTATCCCCATGGAGAAGAA

Downstream 100 bases:

>100_bases
ATGAAGGACGTATCCTCATGAGTCCTGTCTGCCGTGCTATTGCTCCGTATATGCTCCCCTGAGCGGGCGTTTTGGCTTTG
TTGGCTGGGGCGCTGCTCAG

Product: HPP family protein+B94

Products: NA

Alternate protein names: CBS Domain-Containing Protein; HPP Family Protein+B; CBS Domain Containing Membrane Protein; CBS-Domain-Containing Membrane Protein; HPP Domain-Containing Protein; HPP Family Membrane Protein; Cbs Domain Containing Membrane Protein; HPP Domain Protein; Transmembrane Protein; CBS Domain-Containing Membrane Protein; Signal Transduction Protein; Conserved Protein; HPP Family

Number of amino acids: Translated: 176; Mature: 175

Protein sequence:

>176_residues
MTIQRRLTGFPRRCKAPLRGPRPPMTLRYAIWSFLSGTLGILAIFEITSLVGQPLLIGSFGASAVLLFGATESPLAQPRN
LVGGHLVSATVAVIVVALFGSTPLTIAFGVGLAIFAMNLTHTTHPPGGATALIGVQGAVGPGFILVPVLAGALILLVTAL
FTNNVVYHRRYPRHWL

Sequences:

>Translated_176_residues
MTIQRRLTGFPRRCKAPLRGPRPPMTLRYAIWSFLSGTLGILAIFEITSLVGQPLLIGSFGASAVLLFGATESPLAQPRN
LVGGHLVSATVAVIVVALFGSTPLTIAFGVGLAIFAMNLTHTTHPPGGATALIGVQGAVGPGFILVPVLAGALILLVTAL
FTNNVVYHRRYPRHWL
>Mature_175_residues
TIQRRLTGFPRRCKAPLRGPRPPMTLRYAIWSFLSGTLGILAIFEITSLVGQPLLIGSFGASAVLLFGATESPLAQPRNL
VGGHLVSATVAVIVVALFGSTPLTIAFGVGLAIFAMNLTHTTHPPGGATALIGVQGAVGPGFILVPVLAGALILLVTALF
TNNVVYHRRYPRHWL

Specific function: Unknown

COG id: COG3448

COG function: function code T; CBS-domain-containing membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18558; Mature: 18427

Theoretical pI: Translated: 12.27; Mature: 12.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIQRRLTGFPRRCKAPLRGPRPPMTLRYAIWSFLSGTLGILAIFEITSLVGQPLLIGSF
CCCCCHHCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECC
GASAVLLFGATESPLAQPRNLVGGHLVSATVAVIVVALFGSTPLTIAFGVGLAIFAMNLT
CCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC
HTTHPPGGATALIGVQGAVGPGFILVPVLAGALILLVTALFTNNVVYHRRYPRHWL
CCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCC
>Mature Secondary Structure 
TIQRRLTGFPRRCKAPLRGPRPPMTLRYAIWSFLSGTLGILAIFEITSLVGQPLLIGSF
CCCCHHCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECC
GASAVLLFGATESPLAQPRNLVGGHLVSATVAVIVVALFGSTPLTIAFGVGLAIFAMNLT
CCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC
HTTHPPGGATALIGVQGAVGPGFILVPVLAGALILLVTALFTNNVVYHRRYPRHWL
CCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA