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The map label for this gene is ydcS [C]

Identifier: 118579637

GI number: 118579637

Start: 1260163

End: 1261263

Strand: Direct

Name: ydcS [C]

Synonym: Ppro_1208

Alternate gene names: 118579637

Gene position: 1260163-1261263 (Clockwise)

Preceding gene: 118579636

Following gene: 118579638

Centisome position: 31.44

GC content: 52.23

Gene sequence:

>1101_bases
ATGAGAACGATGTCCCTTGTGTCTATCGGCTTATTCATTGCGGTTGTCTTGTGTGGGATTCATCCCGCTTGGGCAGTTCA
GCAGGAGACCATTCGCATTACCTGCTGGGAGGGGTATGCGGACACGGCGTTTGTTGATGATTTCAAGGCCATAATAAAGA
AGAAGTACAACATAAATGTGGACGTGAAACCCTCCTACGCAACCGGTCAAGAAGATTTCTACAATGCCGCCAAGAACGGC
ACCGCTGACCTCATTTCCCCCCCCGCCGACATGGCAAAATCTTCCAAGTTCAACTTTTTCAGAAAAGGGCGAGTGGTACT
GGCTCCCCTTGACATGATAAATATTCCCAATGCAGCACATATGCTGCCGTTTTTCACGGCGGACACGTCTCTTGGCGTGG
CTGGGAAGCGCTATGGCCTTCCCTATAACTGTGGTCCCTACGGGTTGGCGTTCAATGCCGACGTCGTCAAGGAGACTCCG
TCAAGCTGGAATATATTCTGGGATCCGCAGTATGCCGGCAAATACACTATCAATAACAACTTCCATAAGGTCAATATCTG
GATCACGGCCCTTGCACTCGGCTATAAGTACGAGGATCTGTTCGATATCGACCGGCTTGACCGTAGCAGGATCCAGCCCA
GGTTGAATGAACTGGTCAAAGGGGCCAAGAGCCTCTGGGACGGGGAAGCCAATGCTGACGAATTCCCCCAGTTGTCGTTG
GCCACCACCTGGGGATTTGCGGTGGTGAAGGCAAATCAGAAGGGCGGCAACTGGAAACTGGCCACCGCGAAGGAAGGCGG
AAGTGCCTGGATTGACTACTGGTGCATTACCCATGCAGCAAAAGGGATGAAGAAAAAACTGTGCGAAGAGTGGATCAATC
TGCACCTGTCCCCCAAATACCAGGCAGCGGTTGTCAAGCAGCAGGGCGTCTCGCCGGTGGTCGACAATGTGGGTGATCTG
GTGAGCGCTGAGGAGAGAAGCCTCTTCAATGTGGGCAACAACGACTACTTTAAGACCGTGGCAATCTGGCGGGTCATGGA
CAAGAAAACCGAGAAGGCCTTTGGTGAGATGTGGGAGATGGCAAAAAAACAGAGGCAGTAA

Upstream 100 bases:

>100_bases
GGGTTGACAACGGTAGTTTCTTTAGTTAGAGTTTGGACGGGTTTAGAACTTTAGATAGAGGGGTTGGAACGCATGTTGTA
ATACCAAAGGAGGAGATTTT

Downstream 100 bases:

>100_bases
ATGCCCTGTGCCAAGGGCTCTGCCAGGTATCCCAACACCTTCAACCGAGAAAATGGTCCGGAAGGACATGGTCGGCAGTC
GTTTCGTCGACGAGAATCCA

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 366; Mature: 366

Protein sequence:

>366_residues
MRTMSLVSIGLFIAVVLCGIHPAWAVQQETIRITCWEGYADTAFVDDFKAIIKKKYNINVDVKPSYATGQEDFYNAAKNG
TADLISPPADMAKSSKFNFFRKGRVVLAPLDMINIPNAAHMLPFFTADTSLGVAGKRYGLPYNCGPYGLAFNADVVKETP
SSWNIFWDPQYAGKYTINNNFHKVNIWITALALGYKYEDLFDIDRLDRSRIQPRLNELVKGAKSLWDGEANADEFPQLSL
ATTWGFAVVKANQKGGNWKLATAKEGGSAWIDYWCITHAAKGMKKKLCEEWINLHLSPKYQAAVVKQQGVSPVVDNVGDL
VSAEERSLFNVGNNDYFKTVAIWRVMDKKTEKAFGEMWEMAKKQRQ

Sequences:

>Translated_366_residues
MRTMSLVSIGLFIAVVLCGIHPAWAVQQETIRITCWEGYADTAFVDDFKAIIKKKYNINVDVKPSYATGQEDFYNAAKNG
TADLISPPADMAKSSKFNFFRKGRVVLAPLDMINIPNAAHMLPFFTADTSLGVAGKRYGLPYNCGPYGLAFNADVVKETP
SSWNIFWDPQYAGKYTINNNFHKVNIWITALALGYKYEDLFDIDRLDRSRIQPRLNELVKGAKSLWDGEANADEFPQLSL
ATTWGFAVVKANQKGGNWKLATAKEGGSAWIDYWCITHAAKGMKKKLCEEWINLHLSPKYQAAVVKQQGVSPVVDNVGDL
VSAEERSLFNVGNNDYFKTVAIWRVMDKKTEKAFGEMWEMAKKQRQ
>Mature_366_residues
MRTMSLVSIGLFIAVVLCGIHPAWAVQQETIRITCWEGYADTAFVDDFKAIIKKKYNINVDVKPSYATGQEDFYNAAKNG
TADLISPPADMAKSSKFNFFRKGRVVLAPLDMINIPNAAHMLPFFTADTSLGVAGKRYGLPYNCGPYGLAFNADVVKETP
SSWNIFWDPQYAGKYTINNNFHKVNIWITALALGYKYEDLFDIDRLDRSRIQPRLNELVKGAKSLWDGEANADEFPQLSL
ATTWGFAVVKANQKGGNWKLATAKEGGSAWIDYWCITHAAKGMKKKLCEEWINLHLSPKYQAAVVKQQGVSPVVDNVGDL
VSAEERSLFNVGNNDYFKTVAIWRVMDKKTEKAFGEMWEMAKKQRQ

Specific function: Probably Part Of The Binding-Protein-Dependent Transport System Ydcstuv. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41127; Mature: 41127

Theoretical pI: Translated: 9.00; Mature: 9.00

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTMSLVSIGLFIAVVLCGIHPAWAVQQETIRITCWEGYADTAFVDDFKAIIKKKYNINV
CCCHHHHHHHHHHHHHHHCCCCHHEECCCEEEEEEECCCCCCHHHHHHHHHHHHHCCEEE
DVKPSYATGQEDFYNAAKNGTADLISPPADMAKSSKFNFFRKGRVVLAPLDMINIPNAAH
EECCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCEECCCEEEEECCCCCCCCHHH
MLPFFTADTSLGVAGKRYGLPYNCGPYGLAFNADVVKETPSSWNIFWDPQYAGKYTINNN
HCEEEECCCCCCCCCCCCCCCCCCCCCCEEECCHHHHCCCCCCEEEECCCCCCEEEECCC
FHKVNIWITALALGYKYEDLFDIDRLDRSRIQPRLNELVKGAKSLWDGEANADEFPQLSL
EEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEE
ATTWGFAVVKANQKGGNWKLATAKEGGSAWIDYWCITHAAKGMKKKLCEEWINLHLSPKY
EEECCEEEEEECCCCCCEEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
QAAVVKQQGVSPVVDNVGDLVSAEERSLFNVGNNDYFKTVAIWRVMDKKTEKAFGEMWEM
HHHHHHHCCCCHHHHHHHHHHCHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AKKQRQ
HHHHCC
>Mature Secondary Structure
MRTMSLVSIGLFIAVVLCGIHPAWAVQQETIRITCWEGYADTAFVDDFKAIIKKKYNINV
CCCHHHHHHHHHHHHHHHCCCCHHEECCCEEEEEEECCCCCCHHHHHHHHHHHHHCCEEE
DVKPSYATGQEDFYNAAKNGTADLISPPADMAKSSKFNFFRKGRVVLAPLDMINIPNAAH
EECCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCEECCCEEEEECCCCCCCCHHH
MLPFFTADTSLGVAGKRYGLPYNCGPYGLAFNADVVKETPSSWNIFWDPQYAGKYTINNN
HCEEEECCCCCCCCCCCCCCCCCCCCCCEEECCHHHHCCCCCCEEEECCCCCCEEEECCC
FHKVNIWITALALGYKYEDLFDIDRLDRSRIQPRLNELVKGAKSLWDGEANADEFPQLSL
EEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEE
ATTWGFAVVKANQKGGNWKLATAKEGGSAWIDYWCITHAAKGMKKKLCEEWINLHLSPKY
EEECCEEEEEECCCCCCEEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
QAAVVKQQGVSPVVDNVGDLVSAEERSLFNVGNNDYFKTVAIWRVMDKKTEKAFGEMWEM
HHHHHHHCCCCHHHHHHHHHHCHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AKKQRQ
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA