Click here to switch to the map view.

The map label for this gene is ytfE [C]

Identifier: 118579635

GI number: 118579635

Start: 1257725

End: 1258678

Strand: Direct

Name: ytfE [C]

Synonym: Ppro_1206

Alternate gene names: 118579635

Gene position: 1257725-1258678 (Clockwise)

Preceding gene: 118579634

Following gene: 118579636

Centisome position: 31.38

GC content: 56.6

Gene sequence:

>954_bases
ATGAACAAACAGAAAACGGGACAGAAGGGGGACGTAACGGGTAAAACCATCGGTGAACTGGTTGCCTCCGACTATCGGGC
CGCCAGGGTCTTCGAGAAATACGGAATCGATTTCTGCTGCGGCGGCAAAATCCCCCTTGCGACCGCCTGTCAGGAGCGTG
GTATCGATCCTGATCTGGTCAGCCGGGAGATTGGGGAGGCCGCGAGCGAACCGCTGGAGCGGAGCCAGAACTACGCCGCC
TGGGGGCTGCCGTTCCTGGCGGATTACATCATAAACACCCACCATGCCTACTTGAACGAGAATCTCAGCCAGATCTCCGC
CTATGCCGACAAGATCGCCCAGGTCCATGGCGCCAGGCACCCCGAGGTGATTGAGATCGCCAGGATCTTCGACAAGATAG
CGACCGACATGGTGGCCCATCTCCGCGAAGAAGAGGACGTGCTCTTTCCTGCCATCAAACGGATCGATGCGGCAGTACAG
GCCGGCAGGGAACCGGATGCGGGAGACAGGGAAACCGTCAAAACCAGTCTTGCGCAACTTGATCGCGAGCATGAAGAGAT
CGGCGACGCGGTCCACACCATCCGCGATCTCTCCAACAACTATGGGATTCCGAACGATGTCTGCACCACCTTCATGCTCA
CCTACCGGATGCTGAAGGAATTTGAGGACGATCTTCACAAGCATGTCCACATGGAGAACAATATCCTCTTTCCCAAAGCA
GCGCAGCTCTCGGTCGAATCCTGTTCAAGGGAGGAAAAGGCCATGGGGAAAACAGTAGCGGTTGATCAGAATGAATGCAT
CAGTTGCGGTCTCTGCATCGAGAGTTTGCCCGAGGTTTTTCGCTTCGCCGACAACGGCACGTCGGAAGCCTATGATCAGG
GCGGGGCTTCCGAGGACAAGATCCAGTCGGCCATCAACAACTGCCCGGTCTCCTGCATCCACTGGAAGGAATAA

Upstream 100 bases:

>100_bases
CTCCGGTATACTGACCTCAACATCGTGGAAGTCACGATTCGCTGCACGAAAGCCAGGAGAACAGGTGCGCCCTGTTTCTC
CAGGGGCAAAGGAGACCGCA

Downstream 100 bases:

>100_bases
CCCGCAACAGGGGGTGTCAGGGATAAAGTGCCTTCATCAAAATCAGCAGCCACGTTACGTGCCATCGTGCAGTGGTGTTT
CATGCTCTGGGTGGTCGGGA

Product: hypothetical protein

Products: NA

Alternate protein names: RCMNS [H]

Number of amino acids: Translated: 317; Mature: 317

Protein sequence:

>317_residues
MNKQKTGQKGDVTGKTIGELVASDYRAARVFEKYGIDFCCGGKIPLATACQERGIDPDLVSREIGEAASEPLERSQNYAA
WGLPFLADYIINTHHAYLNENLSQISAYADKIAQVHGARHPEVIEIARIFDKIATDMVAHLREEEDVLFPAIKRIDAAVQ
AGREPDAGDRETVKTSLAQLDREHEEIGDAVHTIRDLSNNYGIPNDVCTTFMLTYRMLKEFEDDLHKHVHMENNILFPKA
AQLSVESCSREEKAMGKTVAVDQNECISCGLCIESLPEVFRFADNGTSEAYDQGGASEDKIQSAINNCPVSCIHWKE

Sequences:

>Translated_317_residues
MNKQKTGQKGDVTGKTIGELVASDYRAARVFEKYGIDFCCGGKIPLATACQERGIDPDLVSREIGEAASEPLERSQNYAA
WGLPFLADYIINTHHAYLNENLSQISAYADKIAQVHGARHPEVIEIARIFDKIATDMVAHLREEEDVLFPAIKRIDAAVQ
AGREPDAGDRETVKTSLAQLDREHEEIGDAVHTIRDLSNNYGIPNDVCTTFMLTYRMLKEFEDDLHKHVHMENNILFPKA
AQLSVESCSREEKAMGKTVAVDQNECISCGLCIESLPEVFRFADNGTSEAYDQGGASEDKIQSAINNCPVSCIHWKE
>Mature_317_residues
MNKQKTGQKGDVTGKTIGELVASDYRAARVFEKYGIDFCCGGKIPLATACQERGIDPDLVSREIGEAASEPLERSQNYAA
WGLPFLADYIINTHHAYLNENLSQISAYADKIAQVHGARHPEVIEIARIFDKIATDMVAHLREEEDVLFPAIKRIDAAVQ
AGREPDAGDRETVKTSLAQLDREHEEIGDAVHTIRDLSNNYGIPNDVCTTFMLTYRMLKEFEDDLHKHVHMENNILFPKA
AQLSVESCSREEKAMGKTVAVDQNECISCGLCIESLPEVFRFADNGTSEAYDQGGASEDKIQSAINNCPVSCIHWKE

Specific function: Involved in anaerobic NO protection [H]

COG id: COG2846

COG function: function code D; Regulator of cell morphogenesis and NO signaling

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790654, Length=226, Percent_Identity=29.646017699115, Blast_Score=124, Evalue=8e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007500
- InterPro:   IPR019903
- InterPro:   IPR012312 [H]

Pfam domain/function: PF01814 Hemerythrin; PF04405 ScdA_N [H]

EC number: NA

Molecular weight: Translated: 35206; Mature: 35206

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKQKTGQKGDVTGKTIGELVASDYRAARVFEKYGIDFCCGGKIPLATACQERGIDPDLV
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHCCCCHHHH
SREIGEAASEPLERSQNYAAWGLPFLADYIINTHHAYLNENLSQISAYADKIAQVHGARH
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PEVIEIARIFDKIATDMVAHLREEEDVLFPAIKRIDAAVQAGREPDAGDRETVKTSLAQL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
DREHEEIGDAVHTIRDLSNNYGIPNDVCTTFMLTYRMLKEFEDDLHKHVHMENNILFPKA
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
AQLSVESCSREEKAMGKTVAVDQNECISCGLCIESLPEVFRFADNGTSEAYDQGGASEDK
HHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHH
IQSAINNCPVSCIHWKE
HHHHHHCCCCCEEECCC
>Mature Secondary Structure
MNKQKTGQKGDVTGKTIGELVASDYRAARVFEKYGIDFCCGGKIPLATACQERGIDPDLV
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHCCCCHHHH
SREIGEAASEPLERSQNYAAWGLPFLADYIINTHHAYLNENLSQISAYADKIAQVHGARH
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PEVIEIARIFDKIATDMVAHLREEEDVLFPAIKRIDAAVQAGREPDAGDRETVKTSLAQL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
DREHEEIGDAVHTIRDLSNNYGIPNDVCTTFMLTYRMLKEFEDDLHKHVHMENNILFPKA
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
AQLSVESCSREEKAMGKTVAVDQNECISCGLCIESLPEVFRFADNGTSEAYDQGGASEDK
HHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHH
IQSAINNCPVSCIHWKE
HHHHHHCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA