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The map label for this gene is yfhP [C]

Identifier: 118579599

GI number: 118579599

Start: 1219357

End: 1219761

Strand: Reverse

Name: yfhP [C]

Synonym: Ppro_1168

Alternate gene names: 118579599

Gene position: 1219761-1219357 (Counterclockwise)

Preceding gene: 118579602

Following gene: 118579598

Centisome position: 30.43

GC content: 61.48

Gene sequence:

>405_bases
ATGATGGAACTAACCCGCAAGGGAGAATACGCAATACGGGGTATCGTTTACCTGGCTTCACGCCCCGGCGACCAGGTTTG
CCTGCTGAGCGAGATCGCGGCAGCGGTTGACGTACCCCAGACATTTTTGGCCAAGATATTCCAGCAGTTCAGCAAAATCG
GCCTGGTACGGTCCTATCGCGGAACCGGTGGTGGTTTCATGCTCGGCCGCGCCCCGGAAAAGATCACCCTGCTGGAGGTG
GTGGAGGCCGTGGAGGGACCCGTCGTTCCCAACCGCTGCGTCATCGGCGCCGGCGAATGCGACCGCTCCGTAGCCTGCCG
CGTTCACCCGGTCTGGATCGAAGTACAGCATGAGGTGCGCGCCATCCTGGCCAGGGTAACCCTCAAGGAACTGGCCGGCA
TGTAG

Upstream 100 bases:

>100_bases
AACAGCTAACAGCGGCGACGGGACCACGCAGATTCCAGTTGACAGGCGCGCAAAAAAAAACTAAAAAAGATCCAAACAGT
CTTTTAGGGGTTGCATTGCC

Downstream 100 bases:

>100_bases
AAACGCCGGCGGCCGCAGAAAAAATTTTTCAGCGCTTCAAGATAATTAAGGTCTTTTTTAACCAGCTAGCAACAAAAAAC
GGGCAATCCGGTACCAGACT

Product: BadM/Rrf2 family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MMELTRKGEYAIRGIVYLASRPGDQVCLLSEIAAAVDVPQTFLAKIFQQFSKIGLVRSYRGTGGGFMLGRAPEKITLLEV
VEAVEGPVVPNRCVIGAGECDRSVACRVHPVWIEVQHEVRAILARVTLKELAGM

Sequences:

>Translated_134_residues
MMELTRKGEYAIRGIVYLASRPGDQVCLLSEIAAAVDVPQTFLAKIFQQFSKIGLVRSYRGTGGGFMLGRAPEKITLLEV
VEAVEGPVVPNRCVIGAGECDRSVACRVHPVWIEVQHEVRAILARVTLKELAGM
>Mature_134_residues
MMELTRKGEYAIRGIVYLASRPGDQVCLLSEIAAAVDVPQTFLAKIFQQFSKIGLVRSYRGTGGGFMLGRAPEKITLLEV
VEAVEGPVVPNRCVIGAGECDRSVACRVHPVWIEVQHEVRAILARVTLKELAGM

Specific function: Unknown

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788880, Length=130, Percent_Identity=31.5384615384615, Blast_Score=66, Evalue=7e-13,
Organism=Escherichia coli, GI1790621, Length=130, Percent_Identity=29.2307692307692, Blast_Score=59, Evalue=8e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010242
- InterPro:   IPR000944
- InterPro:   IPR011991 [H]

Pfam domain/function: PF02082 Rrf2 [H]

EC number: NA

Molecular weight: Translated: 14624; Mature: 14624

Theoretical pI: Translated: 8.33; Mature: 8.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMELTRKGEYAIRGIVYLASRPGDQVCLLSEIAAAVDVPQTFLAKIFQQFSKIGLVRSYR
CCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC
GTGGGFMLGRAPEKITLLEVVEAVEGPVVPNRCVIGAGECDRSVACRVHPVWIEVQHEVR
CCCCCEEECCCCCHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCEEEEEEEEEEEHHHHH
AILARVTLKELAGM
HHHHHHHHHHHHCC
>Mature Secondary Structure
MMELTRKGEYAIRGIVYLASRPGDQVCLLSEIAAAVDVPQTFLAKIFQQFSKIGLVRSYR
CCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC
GTGGGFMLGRAPEKITLLEVVEAVEGPVVPNRCVIGAGECDRSVACRVHPVWIEVQHEVR
CCCCCEEECCCCCHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCEEEEEEEEEEEHHHHH
AILARVTLKELAGM
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]