Definition Pelobacter propionicus DSM 2379 chromosome, complete genome.
Accession NC_008609
Length 4,008,000

Click here to switch to the map view.

The map label for this gene is 118579596

Identifier: 118579596

GI number: 118579596

Start: 1215905

End: 1216552

Strand: Reverse

Name: 118579596

Synonym: Ppro_1165

Alternate gene names: NA

Gene position: 1216552-1215905 (Counterclockwise)

Preceding gene: 118579597

Following gene: 118579595

Centisome position: 30.35

GC content: 63.12

Gene sequence:

>648_bases
ATGAGAAAATTTATCATCCATGCGCTCTGCCTGCTGTCTCTGGCAGGCTGCGAAAATGCGACCATCAGGAAAGCCGAGCA
TCCTCCCGCGGCCACCGTTTCCACCGAATCCCCGCTGGACCGCGAGATCAAGAGACTCCTGGAGAAGGGCGTCTCCATGA
GCGAACGAAAACGACAACTCTCGGCCATCGAAACAACTTTCCAACGCCACACCACCCCCGAACGGGCCCGCCGACTGGCG
GCGCTCTGCTTCACCAAGACTCTGGGCACACCCTTTCTCCCCTTCGATCTCGCTGAAATTGCGGTTGCCGAAACCGGCGG
CCACCAACTCTCGTCGTCCGCGGTATCATCCCGGGGCGCCCTGGGAGTCTGGCAGCTCATGCCCCAGCGTGCCAGGAGCC
ACGGCTATGTCCCCGCGGACATGGGGAACGACGAAAAATGCGCCGAGGCGGCAGTGCGGGAACTGAGCAGCAAACTGCGC
ATGGCCCAGGGCAACCTGGAGCGGGCCAAGCGGCTCTACTGCGGACAGGGCCCCCAGGCTGACTACTACCTGCGCAAGGT
CAAGAAGATCCGCCGGGAGATGGTGGCGGTGCTGGAACAGCAGACCGAGCGCCTGGCCATGGGCGAACCGGGGACACGGA
CGCAATGA

Upstream 100 bases:

>100_bases
GGCATCAATCACGAAAGGAGTATCCAGCCGGGAGTCTTCTCCTGCTTACCAGGCGCTCGCGCCCTTCCGGCAAAGCTGAC
ACAACCACCCTTATCCAATT

Downstream 100 bases:

>100_bases
CCGCACGCCTGCTCCGTTTCCTGCTGTTCCCCCTGCTCCTGCTGTGCGGCTGTTCGCTCTTGCTGAAGGAGCCTGATGTT
TCCCTGACCCGCACCAGCAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MRKFIIHALCLLSLAGCENATIRKAEHPPAATVSTESPLDREIKRLLEKGVSMSERKRQLSAIETTFQRHTTPERARRLA
ALCFTKTLGTPFLPFDLAEIAVAETGGHQLSSSAVSSRGALGVWQLMPQRARSHGYVPADMGNDEKCAEAAVRELSSKLR
MAQGNLERAKRLYCGQGPQADYYLRKVKKIRREMVAVLEQQTERLAMGEPGTRTQ

Sequences:

>Translated_215_residues
MRKFIIHALCLLSLAGCENATIRKAEHPPAATVSTESPLDREIKRLLEKGVSMSERKRQLSAIETTFQRHTTPERARRLA
ALCFTKTLGTPFLPFDLAEIAVAETGGHQLSSSAVSSRGALGVWQLMPQRARSHGYVPADMGNDEKCAEAAVRELSSKLR
MAQGNLERAKRLYCGQGPQADYYLRKVKKIRREMVAVLEQQTERLAMGEPGTRTQ
>Mature_215_residues
MRKFIIHALCLLSLAGCENATIRKAEHPPAATVSTESPLDREIKRLLEKGVSMSERKRQLSAIETTFQRHTTPERARRLA
ALCFTKTLGTPFLPFDLAEIAVAETGGHQLSSSAVSSRGALGVWQLMPQRARSHGYVPADMGNDEKCAEAAVRELSSKLR
MAQGNLERAKRLYCGQGPQADYYLRKVKKIRREMVAVLEQQTERLAMGEPGTRTQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23906; Mature: 23906

Theoretical pI: Translated: 10.25; Mature: 10.25

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKFIIHALCLLSLAGCENATIRKAEHPPAATVSTESPLDREIKRLLEKGVSMSERKRQL
CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHH
SAIETTFQRHTTPERARRLAALCFTKTLGTPFLPFDLAEIAVAETGGHQLSSSAVSSRGA
HHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCC
LGVWQLMPQRARSHGYVPADMGNDEKCAEAAVRELSSKLRMAQGNLERAKRLYCGQGPQA
HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCH
DYYLRKVKKIRREMVAVLEQQTERLAMGEPGTRTQ
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MRKFIIHALCLLSLAGCENATIRKAEHPPAATVSTESPLDREIKRLLEKGVSMSERKRQL
CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHH
SAIETTFQRHTTPERARRLAALCFTKTLGTPFLPFDLAEIAVAETGGHQLSSSAVSSRGA
HHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCC
LGVWQLMPQRARSHGYVPADMGNDEKCAEAAVRELSSKLRMAQGNLERAKRLYCGQGPQA
HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCH
DYYLRKVKKIRREMVAVLEQQTERLAMGEPGTRTQ
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA