| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is 118579596
Identifier: 118579596
GI number: 118579596
Start: 1215905
End: 1216552
Strand: Reverse
Name: 118579596
Synonym: Ppro_1165
Alternate gene names: NA
Gene position: 1216552-1215905 (Counterclockwise)
Preceding gene: 118579597
Following gene: 118579595
Centisome position: 30.35
GC content: 63.12
Gene sequence:
>648_bases ATGAGAAAATTTATCATCCATGCGCTCTGCCTGCTGTCTCTGGCAGGCTGCGAAAATGCGACCATCAGGAAAGCCGAGCA TCCTCCCGCGGCCACCGTTTCCACCGAATCCCCGCTGGACCGCGAGATCAAGAGACTCCTGGAGAAGGGCGTCTCCATGA GCGAACGAAAACGACAACTCTCGGCCATCGAAACAACTTTCCAACGCCACACCACCCCCGAACGGGCCCGCCGACTGGCG GCGCTCTGCTTCACCAAGACTCTGGGCACACCCTTTCTCCCCTTCGATCTCGCTGAAATTGCGGTTGCCGAAACCGGCGG CCACCAACTCTCGTCGTCCGCGGTATCATCCCGGGGCGCCCTGGGAGTCTGGCAGCTCATGCCCCAGCGTGCCAGGAGCC ACGGCTATGTCCCCGCGGACATGGGGAACGACGAAAAATGCGCCGAGGCGGCAGTGCGGGAACTGAGCAGCAAACTGCGC ATGGCCCAGGGCAACCTGGAGCGGGCCAAGCGGCTCTACTGCGGACAGGGCCCCCAGGCTGACTACTACCTGCGCAAGGT CAAGAAGATCCGCCGGGAGATGGTGGCGGTGCTGGAACAGCAGACCGAGCGCCTGGCCATGGGCGAACCGGGGACACGGA CGCAATGA
Upstream 100 bases:
>100_bases GGCATCAATCACGAAAGGAGTATCCAGCCGGGAGTCTTCTCCTGCTTACCAGGCGCTCGCGCCCTTCCGGCAAAGCTGAC ACAACCACCCTTATCCAATT
Downstream 100 bases:
>100_bases CCGCACGCCTGCTCCGTTTCCTGCTGTTCCCCCTGCTCCTGCTGTGCGGCTGTTCGCTCTTGCTGAAGGAGCCTGATGTT TCCCTGACCCGCACCAGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 215; Mature: 215
Protein sequence:
>215_residues MRKFIIHALCLLSLAGCENATIRKAEHPPAATVSTESPLDREIKRLLEKGVSMSERKRQLSAIETTFQRHTTPERARRLA ALCFTKTLGTPFLPFDLAEIAVAETGGHQLSSSAVSSRGALGVWQLMPQRARSHGYVPADMGNDEKCAEAAVRELSSKLR MAQGNLERAKRLYCGQGPQADYYLRKVKKIRREMVAVLEQQTERLAMGEPGTRTQ
Sequences:
>Translated_215_residues MRKFIIHALCLLSLAGCENATIRKAEHPPAATVSTESPLDREIKRLLEKGVSMSERKRQLSAIETTFQRHTTPERARRLA ALCFTKTLGTPFLPFDLAEIAVAETGGHQLSSSAVSSRGALGVWQLMPQRARSHGYVPADMGNDEKCAEAAVRELSSKLR MAQGNLERAKRLYCGQGPQADYYLRKVKKIRREMVAVLEQQTERLAMGEPGTRTQ >Mature_215_residues MRKFIIHALCLLSLAGCENATIRKAEHPPAATVSTESPLDREIKRLLEKGVSMSERKRQLSAIETTFQRHTTPERARRLA ALCFTKTLGTPFLPFDLAEIAVAETGGHQLSSSAVSSRGALGVWQLMPQRARSHGYVPADMGNDEKCAEAAVRELSSKLR MAQGNLERAKRLYCGQGPQADYYLRKVKKIRREMVAVLEQQTERLAMGEPGTRTQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23906; Mature: 23906
Theoretical pI: Translated: 10.25; Mature: 10.25
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKFIIHALCLLSLAGCENATIRKAEHPPAATVSTESPLDREIKRLLEKGVSMSERKRQL CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHH SAIETTFQRHTTPERARRLAALCFTKTLGTPFLPFDLAEIAVAETGGHQLSSSAVSSRGA HHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCC LGVWQLMPQRARSHGYVPADMGNDEKCAEAAVRELSSKLRMAQGNLERAKRLYCGQGPQA HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCH DYYLRKVKKIRREMVAVLEQQTERLAMGEPGTRTQ HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MRKFIIHALCLLSLAGCENATIRKAEHPPAATVSTESPLDREIKRLLEKGVSMSERKRQL CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHH SAIETTFQRHTTPERARRLAALCFTKTLGTPFLPFDLAEIAVAETGGHQLSSSAVSSRGA HHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCC LGVWQLMPQRARSHGYVPADMGNDEKCAEAAVRELSSKLRMAQGNLERAKRLYCGQGPQA HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCH DYYLRKVKKIRREMVAVLEQQTERLAMGEPGTRTQ HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA