Click here to switch to the map view.

The map label for this gene is 118579595

Identifier: 118579595

GI number: 118579595

Start: 1215402

End: 1215908

Strand: Reverse

Name: 118579595

Synonym: Ppro_1164

Alternate gene names: NA

Gene position: 1215908-1215402 (Counterclockwise)

Preceding gene: 118579596

Following gene: 118579594

Centisome position: 30.34

GC content: 59.96

Gene sequence:

>507_bases
ATGACCGCACGCCTGCTCCGTTTCCTGCTGTTCCCCCTGCTCCTGCTGTGCGGCTGTTCGCTCTTGCTGAAGGAGCCTGA
TGTTTCCCTGACCCGCACCAGCATTATTGGCATGGATACGGCTGGAGCCGACATCGAGTGCGCTCTGGCCATATCCAACC
CCAATTCCTACGACCTGACCCTGCAGGGATACAGCTACGACCTGCGGGTCATGTCCCTGCCGCTGGCTGCCGGCCGGCTC
CATCAGCCGCTCACCCTGCCGGCAGGGGCAAAGACCGACATGCGCCTGCCGATTCGCGTCAAGTACGCGGACCTGTTTGA
AATCATCAAACGGCGCCCCGATTTGGACCGCATACCCTACCGGATCCAGGCCAGCCTGCTGGTAACCACCCCCTTGGGAA
AGATGGACATCCCGGTGGACATGAGCAAAACCTTCAGCGTTCCGGAAAAGTACCGACCAAACCATTACTTGAATCAGCTG
ATGGGCATCGTCTCCCTTCCCCGCTAG

Upstream 100 bases:

>100_bases
ACTACCTGCGCAAGGTCAAGAAGATCCGCCGGGAGATGGTGGCGGTGCTGGAACAGCAGACCGAGCGCCTGGCCATGGGC
GAACCGGGGACACGGACGCA

Downstream 100 bases:

>100_bases
ACGGGGCTTTTTGCTTGATAACGGAGCGCCCGCTCTGTAAGATACACTCCCTGCTTCAGGATGTGCCAATCCCTCATTCC
ACAAAGGAATCTCGCCCGGT

Product: water stress/hypersensitive response protein

Products: NA

Alternate protein names: Lipoprotein; Late Embryogenesis Abundant; WHy Domain Lipoprotein

Number of amino acids: Translated: 168; Mature: 167

Protein sequence:

>168_residues
MTARLLRFLLFPLLLLCGCSLLLKEPDVSLTRTSIIGMDTAGADIECALAISNPNSYDLTLQGYSYDLRVMSLPLAAGRL
HQPLTLPAGAKTDMRLPIRVKYADLFEIIKRRPDLDRIPYRIQASLLVTTPLGKMDIPVDMSKTFSVPEKYRPNHYLNQL
MGIVSLPR

Sequences:

>Translated_168_residues
MTARLLRFLLFPLLLLCGCSLLLKEPDVSLTRTSIIGMDTAGADIECALAISNPNSYDLTLQGYSYDLRVMSLPLAAGRL
HQPLTLPAGAKTDMRLPIRVKYADLFEIIKRRPDLDRIPYRIQASLLVTTPLGKMDIPVDMSKTFSVPEKYRPNHYLNQL
MGIVSLPR
>Mature_167_residues
TARLLRFLLFPLLLLCGCSLLLKEPDVSLTRTSIIGMDTAGADIECALAISNPNSYDLTLQGYSYDLRVMSLPLAAGRLH
QPLTLPAGAKTDMRLPIRVKYADLFEIIKRRPDLDRIPYRIQASLLVTTPLGKMDIPVDMSKTFSVPEKYRPNHYLNQLM
GIVSLPR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18831; Mature: 18699

Theoretical pI: Translated: 9.41; Mature: 9.41

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTARLLRFLLFPLLLLCGCSLLLKEPDVSLTRTSIIGMDTAGADIECALAISNPNSYDLT
CHHHHHHHHHHHHHHHHCCCEEECCCCCCEEEEEEEECCCCCCCEEEEEEECCCCCEEEE
LQGYSYDLRVMSLPLAAGRLHQPLTLPAGAKTDMRLPIRVKYADLFEIIKRRPDLDRIPY
EECCCEEEEEEEECCCCCCCCCCEECCCCCCCCCCCEEEEEHHHHHHHHHCCCCCCCCCE
RIQASLLVTTPLGKMDIPVDMSKTFSVPEKYRPNHYLNQLMGIVSLPR
EEEEEEEEECCCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TARLLRFLLFPLLLLCGCSLLLKEPDVSLTRTSIIGMDTAGADIECALAISNPNSYDLT
HHHHHHHHHHHHHHHHCCCEEECCCCCCEEEEEEEECCCCCCCEEEEEEECCCCCEEEE
LQGYSYDLRVMSLPLAAGRLHQPLTLPAGAKTDMRLPIRVKYADLFEIIKRRPDLDRIPY
EECCCEEEEEEEECCCCCCCCCCEECCCCCCCCCCCEEEEEHHHHHHHHHCCCCCCCCCE
RIQASLLVTTPLGKMDIPVDMSKTFSVPEKYRPNHYLNQLMGIVSLPR
EEEEEEEEECCCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA