Click here to switch to the map view.

The map label for this gene is accD

Identifier: 118579592

GI number: 118579592

Start: 1211656

End: 1212510

Strand: Reverse

Name: accD

Synonym: Ppro_1161

Alternate gene names: 118579592

Gene position: 1212510-1211656 (Counterclockwise)

Preceding gene: 118579593

Following gene: 118579591

Centisome position: 30.25

GC content: 63.39

Gene sequence:

>855_bases
ATGAGCTGGTTCCACAGGGAAAGAGCAGGCATCAACAGGACACAGATCAAAAAAAGCAGGGTACCCCAGGGGATGTGGGT
CAAATGCCCCGGTTGTTCCGCCACCCTGCTCGCCAAAGATCTGGATGCCAATCTGAATGTCTGTCCCACGTGCGGACACC
ACCACCGCATCGGCGCACGTCGCCGCCTGGAGTCCCTGCTGGACGCAGCGACCTGGCAGGAGCTGGACAGCGGTATGACA
TCGGTGGACTTCCTCCAGTTCAAGGACTCTAAGAGTTACCAGGAGCGCATCGACAGCGCCCTCTCCAAGGGGGGCTCTCG
GGATGCCGTGGTCTGCGTGGAGGGAAGCATCGAGGGGACCGCCGTACAGGTTGCCGTGTTCGACTTCTCATTCATGGGGG
GCAGCATGGGGAGCGTGGTGGGTGAAAAGATCACCCGCGCCATCGAACGAGGCGTGCAGAAGCGCCAGCCGGTGATCATC
GTCTCCGCCTCGGGCGGCGCCCGCATGCAGGAGAGCATCCTCTCCCTGATGCAGATGGCCAAGACCTCGGCGGCACTGGC
AAAACTGAAGGATGCCGGCCTCCCGTTCATCTCCATCCTGACCGATCCCACCACCGGCGGCGTCACCGCCAGTTTCGCCA
TGCTGGGGGACATCAACATCGCTGAACCGAAGGCGTTGATCGGCTTCGCCGGGCCGCGGGTCATCGAGCAGACCCTGCGC
CAGAAGCTGCCCGACGGCTTCCAGCGCGCCGAATACCTGCTGGAGCACGGCATGCTGGACGTGATCGTCCCCCGCACGGA
GATGCGCGCCAAACTGGCCTCGATCCTCGGCATACTGTACCGCCCCGCTGCCTGA

Upstream 100 bases:

>100_bases
ACGGATATGAGGTTTCTTGACAGACAGAGGCTTATCTGTTACCACGTCCTTTTATTTTGAACTTTTTTCGCAGACCACTA
CGAGAATCGAGGATTTGACC

Downstream 100 bases:

>100_bases
GATGCCCCTGGCCGAAACCCTGGAGAGGCTCTACGCCCGCCGCAGGTTCGGCATCCGGCCCGGCATCCAGAGGGTCCGCA
CCCTGCTGGACCGGCTGGGC

Product: acetyl-CoA carboxylase, carboxyl transferase subunit beta

Products: NA

Alternate protein names: ACCase subunit beta; Acetyl-CoA carboxylase carboxyltransferase subunit beta

Number of amino acids: Translated: 284; Mature: 283

Protein sequence:

>284_residues
MSWFHRERAGINRTQIKKSRVPQGMWVKCPGCSATLLAKDLDANLNVCPTCGHHHRIGARRRLESLLDAATWQELDSGMT
SVDFLQFKDSKSYQERIDSALSKGGSRDAVVCVEGSIEGTAVQVAVFDFSFMGGSMGSVVGEKITRAIERGVQKRQPVII
VSASGGARMQESILSLMQMAKTSAALAKLKDAGLPFISILTDPTTGGVTASFAMLGDINIAEPKALIGFAGPRVIEQTLR
QKLPDGFQRAEYLLEHGMLDVIVPRTEMRAKLASILGILYRPAA

Sequences:

>Translated_284_residues
MSWFHRERAGINRTQIKKSRVPQGMWVKCPGCSATLLAKDLDANLNVCPTCGHHHRIGARRRLESLLDAATWQELDSGMT
SVDFLQFKDSKSYQERIDSALSKGGSRDAVVCVEGSIEGTAVQVAVFDFSFMGGSMGSVVGEKITRAIERGVQKRQPVII
VSASGGARMQESILSLMQMAKTSAALAKLKDAGLPFISILTDPTTGGVTASFAMLGDINIAEPKALIGFAGPRVIEQTLR
QKLPDGFQRAEYLLEHGMLDVIVPRTEMRAKLASILGILYRPAA
>Mature_283_residues
SWFHRERAGINRTQIKKSRVPQGMWVKCPGCSATLLAKDLDANLNVCPTCGHHHRIGARRRLESLLDAATWQELDSGMTS
VDFLQFKDSKSYQERIDSALSKGGSRDAVVCVEGSIEGTAVQVAVFDFSFMGGSMGSVVGEKITRAIERGVQKRQPVIIV
SASGGARMQESILSLMQMAKTSAALAKLKDAGLPFISILTDPTTGGVTASFAMLGDINIAEPKALIGFAGPRVIEQTLRQ
KLPDGFQRAEYLLEHGMLDVIVPRTEMRAKLASILGILYRPAA

Specific function: Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA

COG id: COG0777

COG function: function code I; Acetyl-CoA carboxylase beta subunit

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AccD/PCCB family

Homologues:

Organism=Escherichia coli, GI1788655, Length=279, Percent_Identity=58.0645161290323, Blast_Score=339, Evalue=1e-94,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ACCD_PELPD (A1AN64)

Other databases:

- EMBL:   CP000482
- RefSeq:   YP_900842.1
- ProteinModelPortal:   A1AN64
- SMR:   A1AN64
- STRING:   A1AN64
- GeneID:   4573851
- GenomeReviews:   CP000482_GR
- KEGG:   ppd:Ppro_1161
- eggNOG:   COG0777
- HOGENOM:   HBG285696
- OMA:   LEHGMVD
- PhylomeDB:   A1AN64
- ProtClustDB:   CLSK828811
- HAMAP:   MF_01395
- InterPro:   IPR000438
- InterPro:   IPR000022
- InterPro:   IPR011762
- PRINTS:   PR01070
- TIGRFAMs:   TIGR00515

Pfam domain/function: PF01039 Carboxyl_trans

EC number: =6.4.1.2

Molecular weight: Translated: 30777; Mature: 30646

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: PS50980 COA_CT_NTER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSWFHRERAGINRTQIKKSRVPQGMWVKCPGCSATLLAKDLDANLNVCPTCGHHHRIGAR
CCCHHHHHCCCCHHHHHHHCCCCCCEEECCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHH
RRLESLLDAATWQELDSGMTSVDFLQFKDSKSYQERIDSALSKGGSRDAVVCVEGSIEGT
HHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCC
AVQVAVFDFSFMGGSMGSVVGEKITRAIERGVQKRQPVIIVSASGGARMQESILSLMQMA
EEEEEEEEHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHH
KTSAALAKLKDAGLPFISILTDPTTGGVTASFAMLGDINIAEPKALIGFAGPRVIEQTLR
HHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHCCCCCCCCCHHHHCCCCHHHHHHHHH
QKLPDGFQRAEYLLEHGMLDVIVPRTEMRAKLASILGILYRPAA
HHCCCHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SWFHRERAGINRTQIKKSRVPQGMWVKCPGCSATLLAKDLDANLNVCPTCGHHHRIGAR
CCHHHHHCCCCHHHHHHHCCCCCCEEECCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHH
RRLESLLDAATWQELDSGMTSVDFLQFKDSKSYQERIDSALSKGGSRDAVVCVEGSIEGT
HHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCC
AVQVAVFDFSFMGGSMGSVVGEKITRAIERGVQKRQPVIIVSASGGARMQESILSLMQMA
EEEEEEEEHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHH
KTSAALAKLKDAGLPFISILTDPTTGGVTASFAMLGDINIAEPKALIGFAGPRVIEQTLR
HHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHCCCCCCCCCHHHHCCCCHHHHHHHHH
QKLPDGFQRAEYLLEHGMLDVIVPRTEMRAKLASILGILYRPAA
HHCCCHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA