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The map label for this gene is ykoX [H]

Identifier: 118578724

GI number: 118578724

Start: 278930

End: 279538

Strand: Reverse

Name: ykoX [H]

Synonym: Ppro_0282

Alternate gene names: 118578724

Gene position: 279538-278930 (Counterclockwise)

Preceding gene: 118578728

Following gene: 118578723

Centisome position: 6.97

GC content: 61.25

Gene sequence:

>609_bases
ATGCACGCACTCGTTCAATGGTTGCTGGATACCATAGGCTCCATGGGCTATCCCGGAATCTTCCTGCTCATGGCCATGGA
GAGCTCCATCATCCCGGTGCCCAGCGAACTGGTCATGCCGCCGGCCGGCTACCTTGCCTTCCAGGGGGAGATGAACATGG
CCGCAGCCATCCTCTGCGGCACACTGGGAAGCCTGGTCGGAGCCTATGCCAACTACTTCGCCTCCCACTACCTGGGCAGG
CCGCTGATCATCAGGTACGGCAGGTACGTGCTGATCCCCCCTGAAAAGTTCGAGCGGGTGGAGCACTTCTTCCTGCGCCA
CGGCGAGATATCCACCTTCATCGGCAGGCTGCTGCCGGTGGTGCGTCACCTGATCTCCATCCCGGCCGGGCTGTCCGGCA
TGAACCACCTGCGCTTCTCGCTCTACACCCTGCTGGGGGCCGGCATCTGGTGCACCATCCTGACCGGCATCGGCTATGTC
ATCGGAGAAAACCAACAGCTGATCATGCGCTACTCCCACCAGGCCCTGCTCTGGGTGGTCATATTCAGCATCGCCCTGAT
CAGCGTCTATATCTGGCGGCAGCGGCGGCGCTCGGGTATTAAAGCCTAA

Upstream 100 bases:

>100_bases
GTTTGCCTCATCGTTTCACCCGGGTATACACTGTTGCCCCAATCCCCAAGATGGGGTATAAGGGCTGTTTACTGATTCAA
CCGCCACAGGGAGTCTTTCA

Downstream 100 bases:

>100_bases
AGAACCGGGGAAGGCAAAGAGATTTTTAGCCATTTCCAGAGGAGACACAAACCATGCAGATCAAACGCGCCGACCGCATC
CACTACCTGGCCACCGATTT

Product: DedA family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MHALVQWLLDTIGSMGYPGIFLLMAMESSIIPVPSELVMPPAGYLAFQGEMNMAAAILCGTLGSLVGAYANYFASHYLGR
PLIIRYGRYVLIPPEKFERVEHFFLRHGEISTFIGRLLPVVRHLISIPAGLSGMNHLRFSLYTLLGAGIWCTILTGIGYV
IGENQQLIMRYSHQALLWVVIFSIALISVYIWRQRRRSGIKA

Sequences:

>Translated_202_residues
MHALVQWLLDTIGSMGYPGIFLLMAMESSIIPVPSELVMPPAGYLAFQGEMNMAAAILCGTLGSLVGAYANYFASHYLGR
PLIIRYGRYVLIPPEKFERVEHFFLRHGEISTFIGRLLPVVRHLISIPAGLSGMNHLRFSLYTLLGAGIWCTILTGIGYV
IGENQQLIMRYSHQALLWVVIFSIALISVYIWRQRRRSGIKA
>Mature_202_residues
MHALVQWLLDTIGSMGYPGIFLLMAMESSIIPVPSELVMPPAGYLAFQGEMNMAAAILCGTLGSLVGAYANYFASHYLGR
PLIIRYGRYVLIPPEKFERVEHFFLRHGEISTFIGRLLPVVRHLISIPAGLSGMNHLRFSLYTLLGAGIWCTILTGIGYV
IGENQQLIMRYSHQALLWVVIFSIALISVYIWRQRRRSGIKA

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

Organism=Escherichia coli, GI1789481, Length=163, Percent_Identity=28.2208588957055, Blast_Score=77, Evalue=6e-16,
Organism=Escherichia coli, GI1789384, Length=176, Percent_Identity=26.7045454545455, Blast_Score=69, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 22628; Mature: 22628

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHALVQWLLDTIGSMGYPGIFLLMAMESSIIPVPSELVMPPAGYLAFQGEMNMAAAILCG
CHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHCCCCCCCEEEECCHHHHHHHHHH
TLGSLVGAYANYFASHYLGRPLIIRYGRYVLIPPEKFERVEHFFLRHGEISTFIGRLLPV
HHHHHHHHHHHHHHHHHCCCHHEEECCCEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHH
VRHLISIPAGLSGMNHLRFSLYTLLGAGIWCTILTGIGYVIGENQQLIMRYSHQALLWVV
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
IFSIALISVYIWRQRRRSGIKA
HHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MHALVQWLLDTIGSMGYPGIFLLMAMESSIIPVPSELVMPPAGYLAFQGEMNMAAAILCG
CHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHCCCCCCCEEEECCHHHHHHHHHH
TLGSLVGAYANYFASHYLGRPLIIRYGRYVLIPPEKFERVEHFFLRHGEISTFIGRLLPV
HHHHHHHHHHHHHHHHHCCCHHEEECCCEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHH
VRHLISIPAGLSGMNHLRFSLYTLLGAGIWCTILTGIGYVIGENQQLIMRYSHQALLWVV
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
IFSIALISVYIWRQRRRSGIKA
HHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]