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The map label for this gene is 117922039

Identifier: 117922039

GI number: 117922039

Start: 4326613

End: 4327728

Strand: Direct

Name: 117922039

Synonym: Shewana3_3603

Alternate gene names: NA

Gene position: 4326613-4327728 (Clockwise)

Preceding gene: 117922038

Following gene: 117922047

Centisome position: 87.02

GC content: 46.06

Gene sequence:

>1116_bases
ATGTTAGACGGAAAAATATTGCCTTTAGCAAGTCTATTTGCCTTAGCCTTAAGTACTTCGTTACCCTTAAATGCCTCGGA
AAACACTTTTTCCCAAGCCTACAGTGACTACCAAACCGCACTCAAACAAGGTGATAACGCCCAAATAGAAGCCAGCGCCA
AAAGAGCCTTCGAACTAGGTGAGGCTCAATATGCCAAGGATAGTGTCGATTTAGCGAACCTCGCCATGAACTGGGCTGGC
GCGCTAAAAAAGGTGGCTATGCCGAATCTCTTTGAGGGAGATAATGCGGCGAAAACGGCCAAGGCCTATGAGTTATATCA
ACTCGCATTAAGCAATTATAAAAAGCATTACGGCGAGCATGCAGCTGAGCTTATCGACCCGCTACTCGGCGCAGCGGAAA
CCTCACCTAAACTGACTGTGGCGAAAGAGCTTTTTGAAAATGCTATTGAAATTGCTGAAAAAACAGCAAATAAAAAGCTG
TTGGCCGATGTAAAGATAGCAACCTTTGATCGCCTCACCAATACAGGATTGTACACGGCTCAGGTAAGGGACTATGCCTT
CGAGGCCTATGAAACTTACAAAGAGATCCTTCCCGAAAATGCCCTAGACAGAGTCAAAGCTACCTATGTAGTGGGTGCAG
TTGAATATGCTGAAAAGCATGATGACAAGGCGATTCCATTACTGTTAGAAGTGGTTAAGCAGTTTGAAGCCCTTAAGTTT
AGCCATCCCTACGCCTTAAGTGCCCACGCTTATTTAGTCGAACTTTATGAACGCCAAGGAAAACGCGAAGAGTCCACCGC
CCACTGTATCGCCATCGGCAAGATGCGCCCATGGGCCGACACTCAGGAGCAACAACCGCTGTTTCGTACGACACCCAAAT
ACCCTAAGTCCTACCTCATGCAACGTAAAAGCGGCTATGTGACCCTTAACTTCACTGTTGATGAGATGGGATTTGTAAAA
AATCCTGAAGTGCTCGAATCCAAAGGCGGTGTGCTATTTGAAAAATCCACACTGAAAATGATCGAAGAATGGCGCTATGC
CCCTAAGTTTGAACATGGCAAGCCCGTGCCAGCACAAACGACTGTGCGTATAGACTATTTCACCGATAAGTCTTAA

Upstream 100 bases:

>100_bases
CTTCTAAAATCCCCAGAGTGACCAACAGAGCGAAAACAAGCTTGTATCAAGAGTGAAACATTTGTACTATCCGATGGAAC
TAAATATAAGGATATACAAG

Downstream 100 bases:

>100_bases
TCGGTTTCGGTCACCTATAATAGGTTACTCGACCTCATATCCCAGCCCATCGCCTAATCCCGATGGGCTGTTTTTATCTT
CTGAAGTAACTGAAGCAGTT

Product: TonB family protein

Products: NA

Alternate protein names: NB Domain-Containing Protein; Outer Membrane Transport Energization Protein nB

Number of amino acids: Translated: 371; Mature: 371

Protein sequence:

>371_residues
MLDGKILPLASLFALALSTSLPLNASENTFSQAYSDYQTALKQGDNAQIEASAKRAFELGEAQYAKDSVDLANLAMNWAG
ALKKVAMPNLFEGDNAAKTAKAYELYQLALSNYKKHYGEHAAELIDPLLGAAETSPKLTVAKELFENAIEIAEKTANKKL
LADVKIATFDRLTNTGLYTAQVRDYAFEAYETYKEILPENALDRVKATYVVGAVEYAEKHDDKAIPLLLEVVKQFEALKF
SHPYALSAHAYLVELYERQGKREESTAHCIAIGKMRPWADTQEQQPLFRTTPKYPKSYLMQRKSGYVTLNFTVDEMGFVK
NPEVLESKGGVLFEKSTLKMIEEWRYAPKFEHGKPVPAQTTVRIDYFTDKS

Sequences:

>Translated_371_residues
MLDGKILPLASLFALALSTSLPLNASENTFSQAYSDYQTALKQGDNAQIEASAKRAFELGEAQYAKDSVDLANLAMNWAG
ALKKVAMPNLFEGDNAAKTAKAYELYQLALSNYKKHYGEHAAELIDPLLGAAETSPKLTVAKELFENAIEIAEKTANKKL
LADVKIATFDRLTNTGLYTAQVRDYAFEAYETYKEILPENALDRVKATYVVGAVEYAEKHDDKAIPLLLEVVKQFEALKF
SHPYALSAHAYLVELYERQGKREESTAHCIAIGKMRPWADTQEQQPLFRTTPKYPKSYLMQRKSGYVTLNFTVDEMGFVK
NPEVLESKGGVLFEKSTLKMIEEWRYAPKFEHGKPVPAQTTVRIDYFTDKS
>Mature_371_residues
MLDGKILPLASLFALALSTSLPLNASENTFSQAYSDYQTALKQGDNAQIEASAKRAFELGEAQYAKDSVDLANLAMNWAG
ALKKVAMPNLFEGDNAAKTAKAYELYQLALSNYKKHYGEHAAELIDPLLGAAETSPKLTVAKELFENAIEIAEKTANKKL
LADVKIATFDRLTNTGLYTAQVRDYAFEAYETYKEILPENALDRVKATYVVGAVEYAEKHDDKAIPLLLEVVKQFEALKF
SHPYALSAHAYLVELYERQGKREESTAHCIAIGKMRPWADTQEQQPLFRTTPKYPKSYLMQRKSGYVTLNFTVDEMGFVK
NPEVLESKGGVLFEKSTLKMIEEWRYAPKFEHGKPVPAQTTVRIDYFTDKS

Specific function: Unknown

COG id: COG0810

COG function: function code M; Periplasmic protein TonB, links inner and outer membranes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41601; Mature: 41601

Theoretical pI: Translated: 6.20; Mature: 6.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDGKILPLASLFALALSTSLPLNASENTFSQAYSDYQTALKQGDNAQIEASAKRAFELG
CCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHC
EAQYAKDSVDLANLAMNWAGALKKVAMPNLFEGDNAAKTAKAYELYQLALSNYKKHYGEH
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AAELIDPLLGAAETSPKLTVAKELFENAIEIAEKTANKKLLADVKIATFDRLTNTGLYTA
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEE
QVRDYAFEAYETYKEILPENALDRVKATYVVGAVEYAEKHDDKAIPLLLEVVKQFEALKF
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHC
SHPYALSAHAYLVELYERQGKREESTAHCIAIGKMRPWADTQEQQPLFRTTPKYPKSYLM
CCCCEEHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCHHHCCCCCCHHHHH
QRKSGYVTLNFTVDEMGFVKNPEVLESKGGVLFEKSTLKMIEEWRYAPKFEHGKPVPAQT
HHCCCEEEEEEEHHCCCCCCCCHHHHCCCCEEEEHHHHHHHHHHCCCCCCCCCCCCCCCE
TVRIDYFTDKS
EEEEEEECCCC
>Mature Secondary Structure
MLDGKILPLASLFALALSTSLPLNASENTFSQAYSDYQTALKQGDNAQIEASAKRAFELG
CCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHC
EAQYAKDSVDLANLAMNWAGALKKVAMPNLFEGDNAAKTAKAYELYQLALSNYKKHYGEH
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AAELIDPLLGAAETSPKLTVAKELFENAIEIAEKTANKKLLADVKIATFDRLTNTGLYTA
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEE
QVRDYAFEAYETYKEILPENALDRVKATYVVGAVEYAEKHDDKAIPLLLEVVKQFEALKF
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHC
SHPYALSAHAYLVELYERQGKREESTAHCIAIGKMRPWADTQEQQPLFRTTPKYPKSYLM
CCCCEEHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCHHHCCCCCCHHHHH
QRKSGYVTLNFTVDEMGFVKNPEVLESKGGVLFEKSTLKMIEEWRYAPKFEHGKPVPAQT
HHCCCEEEEEEEHHCCCCCCCCHHHHCCCCEEEEHHHHHHHHHHCCCCCCCCCCCCCCCE
TVRIDYFTDKS
EEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA