| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is mhpD [C]
Identifier: 117922038
GI number: 117922038
Start: 4325639
End: 4326454
Strand: Direct
Name: mhpD [C]
Synonym: Shewana3_3602
Alternate gene names: 117922038
Gene position: 4325639-4326454 (Clockwise)
Preceding gene: 117922035
Following gene: 117922039
Centisome position: 87.0
GC content: 51.59
Gene sequence:
>816_bases ATGTCACAGACAGACGCTAAAACACAGCTTGAGTCCATTAACGCAGCAGCACAAGAACTCGCCCAGCGACGCGCCAAGGG TGAAGCGGACGCCCTGTTACAAGAAGCGCTAAGACCGAAAGATTTCCCCCACGCCTTTGCCATCCAGCAGGCCATTGCGC AGCTGTTTAGCGCCCAAGGCAACCCAATTGCAGGGTGGAAGTGCTTACTGCCAACCGCAGAAAAAACCGTGGTAGCACCT ATCTATCAACATGATGTGTATATCGAAACCGCCGAGTGTCCGCTTTATCCTTCGAGCAAAGGGCTTGCCCGTGTCGAACC CGAGCTCGCCTTTGAAATTGGCAGCGATTTACCACCACGATCCACGCCTTATTCAGGAGCCGAAATTGACGCCGCCCTCG GTAAAACGCGCCTCGCCTTGGAACTAATCAAAAGTCGTTATCAAAACCCAAGCGAAGCCAATCACTTCGACGCCCTCGCC GATGGCTTAGTCAATCAAGGCCTATGGTTAGGGCCTGAACTGCTTACACCAGCCGAGATAGAAACAGGTCATTTCGCCCT AAGCGTTGAAATCGCCGCAAGCGGACAGCAAGCAAGTGAAACTCTACAAAAAGCCGCTGTTCATCCAAATGGTTTCCCTA AAGCTGGGCTTTATTGGTTGGTCAACTTCTTATCTACCCAAGGGATTGGCTTAACCCGAGGACAATATGTGATCACAGGC TCCTATGCGGGGGTATTAGATTTGCCACTCAATCAGCACTGCCAACTCCACTACGGCGACTTAGGCCAGTTTGCTTTGCA GTTCGTGGCTAAATAA
Upstream 100 bases:
>100_bases CAGATTGGATTTGCAGAGTCGAGTTATGCCTTATGCGCTCAGTTTTTGCGGCATCAACCACTCTGTATAAGCCTTTTAAA TACGTTAGTTAGGATTAAAC
Downstream 100 bases:
>100_bases GTACAGCCTAAAGAGTGCCAAGCTAGCCAGCAAAGTAAGAAGGTAGGCAAAGGCTTACCTTCTAAAATCCCCAGAGTGAC CAACAGAGCGAAAACAAGCT
Product: hydratase/decarboxylase family protein
Products: H2O; 2-oxopent-4-enoate [C]
Alternate protein names: 2-Keto-4-Pentenoate Hydratase-Like Protein; Hydratase; 2-Keto-4-Pentenoate Hydratase-Like; Hydratase/Decarboxylase Family; 2-Keto-4-Pentenoate Hydratase; 2-Oxopent-4-Enoate Hydratase
Number of amino acids: Translated: 271; Mature: 270
Protein sequence:
>271_residues MSQTDAKTQLESINAAAQELAQRRAKGEADALLQEALRPKDFPHAFAIQQAIAQLFSAQGNPIAGWKCLLPTAEKTVVAP IYQHDVYIETAECPLYPSSKGLARVEPELAFEIGSDLPPRSTPYSGAEIDAALGKTRLALELIKSRYQNPSEANHFDALA DGLVNQGLWLGPELLTPAEIETGHFALSVEIAASGQQASETLQKAAVHPNGFPKAGLYWLVNFLSTQGIGLTRGQYVITG SYAGVLDLPLNQHCQLHYGDLGQFALQFVAK
Sequences:
>Translated_271_residues MSQTDAKTQLESINAAAQELAQRRAKGEADALLQEALRPKDFPHAFAIQQAIAQLFSAQGNPIAGWKCLLPTAEKTVVAP IYQHDVYIETAECPLYPSSKGLARVEPELAFEIGSDLPPRSTPYSGAEIDAALGKTRLALELIKSRYQNPSEANHFDALA DGLVNQGLWLGPELLTPAEIETGHFALSVEIAASGQQASETLQKAAVHPNGFPKAGLYWLVNFLSTQGIGLTRGQYVITG SYAGVLDLPLNQHCQLHYGDLGQFALQFVAK >Mature_270_residues SQTDAKTQLESINAAAQELAQRRAKGEADALLQEALRPKDFPHAFAIQQAIAQLFSAQGNPIAGWKCLLPTAEKTVVAPI YQHDVYIETAECPLYPSSKGLARVEPELAFEIGSDLPPRSTPYSGAEIDAALGKTRLALELIKSRYQNPSEANHFDALAD GLVNQGLWLGPELLTPAEIETGHFALSVEIAASGQQASETLQKAAVHPNGFPKAGLYWLVNFLSTQGIGLTRGQYVITGS YAGVLDLPLNQHCQLHYGDLGQFALQFVAK
Specific function: 3-hydroxyphenylpropionate degradation. [C]
COG id: COG3971
COG function: function code Q; 2-keto-4-pentenoate hydratase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 4.2.1.- [C]
Molecular weight: Translated: 29235; Mature: 29104
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQTDAKTQLESINAAAQELAQRRAKGEADALLQEALRPKDFPHAFAIQQAIAQLFSAQG CCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCC NPIAGWKCLLPTAEKTVVAPIYQHDVYIETAECPLYPSSKGLARVEPELAFEIGSDLPPR CCCCCEEEECCCCCCEEEEEEEECCEEEEECCCCCCCCCCCCCCCCHHHHHHHCCCCCCC STPYSGAEIDAALGKTRLALELIKSRYQNPSEANHFDALADGLVNQGLWLGPELLTPAEI CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC ETGHFALSVEIAASGQQASETLQKAAVHPNGFPKAGLYWLVNFLSTQGIGLTRGQYVITG CCCEEEEEEEEECCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCEECCCEEEEE SYAGVLDLPLNQHCQLHYGDLGQFALQFVAK CCCCEEECCCCCCCEEEECCHHHHHHHHHCC >Mature Secondary Structure SQTDAKTQLESINAAAQELAQRRAKGEADALLQEALRPKDFPHAFAIQQAIAQLFSAQG CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCC NPIAGWKCLLPTAEKTVVAPIYQHDVYIETAECPLYPSSKGLARVEPELAFEIGSDLPPR CCCCCEEEECCCCCCEEEEEEEECCEEEEECCCCCCCCCCCCCCCCHHHHHHHCCCCCCC STPYSGAEIDAALGKTRLALELIKSRYQNPSEANHFDALADGLVNQGLWLGPELLTPAEI CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC ETGHFALSVEIAASGQQASETLQKAAVHPNGFPKAGLYWLVNFLSTQGIGLTRGQYVITG CCCEEEEEEEEECCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCEECCCEEEEE SYAGVLDLPLNQHCQLHYGDLGQFALQFVAK CCCCEEECCCCCCCEEEECCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 4-hydroxy-2-ketovalerate [C]
Specific reaction: 4-hydroxy-2-ketovalerate = H2O + 2-oxopent-4-enoate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA