| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117921549
Identifier: 117921549
GI number: 117921549
Start: 3731226
End: 3732413
Strand: Reverse
Name: 117921549
Synonym: Shewana3_3111
Alternate gene names: NA
Gene position: 3732413-3731226 (Counterclockwise)
Preceding gene: 117921550
Following gene: 117921548
Centisome position: 75.07
GC content: 50.76
Gene sequence:
>1188_bases ATGAGTACGACTGCGCCGGAATCTATCACCAATACGGGCGTGAATGCTCAGGAGGCTGCCGCGAAAAAGCGTCAGTCAAA ACCGCGGTTGATGTCCCTCGATGCCCTGCGTGGCTTCGATATGTTTTGGATTCTAGGTGGTGAAGCCCTATTTGGCGCCT TGCTTATGTTGACGGGCTGGGCGGGCTGGCAATGGGGTGATACCCAAATGCATCATAGTGAGTGGAATGGGTTTCGCTTC TATGATTTGATTTTTCCGCTGTTTATTTTCCTTTCCGGTGTTGCCCTTGGATTATCGCCAAAACGCTTAGATAAACTGCC GATGCAGGAGCGTATGCCTGTGTATCGACACGGAATAAAGCGACTGTTTCTTTTGTTGTTGCTTGGCATTCTTTATAACC ATGGTTGGGGAACCGGGGCGCCTGCCGATCCTGAAAAAGTCCGTTATGCCAGCGTATTAGGTAGAATTGCCTTTGCATGG TTCTTCGCCGCCTTGCTGGTGTGGCATACCAGTTTACGGACCCAAGTGCTGGTGGCCTTGGGCATCTTAGTGGCCTATGG CGCGGTGCAACTCTGGTTGCCGTTTCCTGGTGGACAGGCTGGTGTGTTATCACCGACTGAGTCAATCAATGCTTATGTGG ATAGCCTGTTACTGCCGGGTGTGAGTTATCAAGGACGAACGCCCGATCCTGAAGGCGTGTTATCGACACTGCCCGCCGTA GTCAACGCCTTAGCGGGTGTGTTTGTCGGTCATTTTATTGTGAAATCCCATCCTAAAGGGGAGTGGGCTAAGGTTGGCCT CTTGAGCGTTGCCGGTGGTGTTTGTTTGGCCCTAGGCTGGTTGCTGGGTGGGGTTATTCCCGTCAATAAAGAGCTGTGGA CCAGCTCTTTTGTGTTGGTCACTAGCGGTTGGAGCATGCTGCTGTTAGCACTATTTTATGCCCTTGTGGATGTGCTGAAA TGGCAAAAGCTCGCCTTTATTTTTGTGGTGATAGGCACTAACGCCATCATTATTTATCTGGCCTCCAGCCTAGTGGATTG GAAGTATATCGCCCAGAGTGTGTTCGGTGGCGTTATCGCGGTATTGCCGGAAAATGCTCAGCCCTTAGGAGCTGTGATTG GTTTGCTCACCGTTCAATGGTTAGTGCTGTATTGGATGTATCGTCGCAACATTTTTGTGCGGATCTAA
Upstream 100 bases:
>100_bases TCGTATTTTGATGACAGGGGCTAAGTTTTTTTATTGTACAGTCTGCATTTTGCTCAAAAGTTATAAAATAATTTAAATAA CAATAATAAAGGATAATGGT
Downstream 100 bases:
>100_bases CGCCGATATCTGATTTTTCTTAAAGCCACAGACTCACCTCTGTGGCTTTTTTATTTCTAGCAACCAAAGGGCGCAGAGCA TCTTTGGTTGTAAATCAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 395; Mature: 394
Protein sequence:
>395_residues MSTTAPESITNTGVNAQEAAAKKRQSKPRLMSLDALRGFDMFWILGGEALFGALLMLTGWAGWQWGDTQMHHSEWNGFRF YDLIFPLFIFLSGVALGLSPKRLDKLPMQERMPVYRHGIKRLFLLLLLGILYNHGWGTGAPADPEKVRYASVLGRIAFAW FFAALLVWHTSLRTQVLVALGILVAYGAVQLWLPFPGGQAGVLSPTESINAYVDSLLLPGVSYQGRTPDPEGVLSTLPAV VNALAGVFVGHFIVKSHPKGEWAKVGLLSVAGGVCLALGWLLGGVIPVNKELWTSSFVLVTSGWSMLLLALFYALVDVLK WQKLAFIFVVIGTNAIIIYLASSLVDWKYIAQSVFGGVIAVLPENAQPLGAVIGLLTVQWLVLYWMYRRNIFVRI
Sequences:
>Translated_395_residues MSTTAPESITNTGVNAQEAAAKKRQSKPRLMSLDALRGFDMFWILGGEALFGALLMLTGWAGWQWGDTQMHHSEWNGFRF YDLIFPLFIFLSGVALGLSPKRLDKLPMQERMPVYRHGIKRLFLLLLLGILYNHGWGTGAPADPEKVRYASVLGRIAFAW FFAALLVWHTSLRTQVLVALGILVAYGAVQLWLPFPGGQAGVLSPTESINAYVDSLLLPGVSYQGRTPDPEGVLSTLPAV VNALAGVFVGHFIVKSHPKGEWAKVGLLSVAGGVCLALGWLLGGVIPVNKELWTSSFVLVTSGWSMLLLALFYALVDVLK WQKLAFIFVVIGTNAIIIYLASSLVDWKYIAQSVFGGVIAVLPENAQPLGAVIGLLTVQWLVLYWMYRRNIFVRI >Mature_394_residues STTAPESITNTGVNAQEAAAKKRQSKPRLMSLDALRGFDMFWILGGEALFGALLMLTGWAGWQWGDTQMHHSEWNGFRFY DLIFPLFIFLSGVALGLSPKRLDKLPMQERMPVYRHGIKRLFLLLLLGILYNHGWGTGAPADPEKVRYASVLGRIAFAWF FAALLVWHTSLRTQVLVALGILVAYGAVQLWLPFPGGQAGVLSPTESINAYVDSLLLPGVSYQGRTPDPEGVLSTLPAVV NALAGVFVGHFIVKSHPKGEWAKVGLLSVAGGVCLALGWLLGGVIPVNKELWTSSFVLVTSGWSMLLLALFYALVDVLKW QKLAFIFVVIGTNAIIIYLASSLVDWKYIAQSVFGGVIAVLPENAQPLGAVIGLLTVQWLVLYWMYRRNIFVRI
Specific function: Unknown
COG id: COG4299
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI150378452, Length=450, Percent_Identity=26.6666666666667, Blast_Score=89, Evalue=8e-18, Organism=Drosophila melanogaster, GI24639786, Length=377, Percent_Identity=28.3819628647215, Blast_Score=96, Evalue=6e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43416; Mature: 43285
Theoretical pI: Translated: 9.88; Mature: 9.88
Prosite motif: PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTTAPESITNTGVNAQEAAAKKRQSKPRLMSLDALRGFDMFWILGGEALFGALLMLTGW CCCCCCCHHHCCCCCHHHHHHHHHCCCCCCEEHHHHCCCCEEEEECCHHHHHHHHHHHCC AGWQWGDTQMHHSEWNGFRFYDLIFPLFIFLSGVALGLSPKRLDKLPMQERMPVYRHGIK CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHCCCHHHHHHH RLFLLLLLGILYNHGWGTGAPADPEKVRYASVLGRIAFAWFFAALLVWHTSLRTQVLVAL HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GILVAYGAVQLWLPFPGGQAGVLSPTESINAYVDSLLLPGVSYQGRTPDPEGVLSTLPAV HHHHHHHHHEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH VNALAGVFVGHFIVKSHPKGEWAKVGLLSVAGGVCLALGWLLGGVIPVNKELWTSSFVLV HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCEEEE TSGWSMLLLALFYALVDVLKWQKLAFIFVVIGTNAIIIYLASSLVDWKYIAQSVFGGVIA ECCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCEEE VLPENAQPLGAVIGLLTVQWLVLYWMYRRNIFVRI EECCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEC >Mature Secondary Structure STTAPESITNTGVNAQEAAAKKRQSKPRLMSLDALRGFDMFWILGGEALFGALLMLTGW CCCCCCHHHCCCCCHHHHHHHHHCCCCCCEEHHHHCCCCEEEEECCHHHHHHHHHHHCC AGWQWGDTQMHHSEWNGFRFYDLIFPLFIFLSGVALGLSPKRLDKLPMQERMPVYRHGIK CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHCCCHHHHHHH RLFLLLLLGILYNHGWGTGAPADPEKVRYASVLGRIAFAWFFAALLVWHTSLRTQVLVAL HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GILVAYGAVQLWLPFPGGQAGVLSPTESINAYVDSLLLPGVSYQGRTPDPEGVLSTLPAV HHHHHHHHHEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH VNALAGVFVGHFIVKSHPKGEWAKVGLLSVAGGVCLALGWLLGGVIPVNKELWTSSFVLV HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCEEEE TSGWSMLLLALFYALVDVLKWQKLAFIFVVIGTNAIIIYLASSLVDWKYIAQSVFGGVIA ECCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCEEE VLPENAQPLGAVIGLLTVQWLVLYWMYRRNIFVRI EECCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA