Click here to switch to the map view.

The map label for this gene is 117921547

Identifier: 117921547

GI number: 117921547

Start: 3728801

End: 3729523

Strand: Direct

Name: 117921547

Synonym: Shewana3_3109

Alternate gene names: NA

Gene position: 3728801-3729523 (Clockwise)

Preceding gene: 117921546

Following gene: 117921556

Centisome position: 74.99

GC content: 50.76

Gene sequence:

>723_bases
GTGAATAACAACCTAAATAAAAAACGGCTGGCACAAGTTGTTGGGCTCGCGCTGACGACCAGCTTATTCTCCGGCATTGC
CGCCGCAGAAGTGTCGGGGGAAATTAGCGTAACCAATGATTATCGCTTCCGAGGCATCTCGCAAACCGCGGGCGATCCTG
CGGTTCAAGGCGGTGTCGATTGGAGTTTTGAGTCCGGATTTTCGGTCGGCGCCTGGGCCAGTAATGTCGACTTTGATGAG
CCAGGTTACAACGGTCCAGATATCGAGTATGACTTCTATGTTGCCTACGGCGGTGACATCAATGACAACGTCAGTTACGA
CGTGACCCTCAACCGCTATAACTATTCGGGTGAGAGTGACCTCGGCTATTTCGAAGTCACAGCTGGCGTCGAGTTTAGCG
GCTTTCGCGTAGCCTATTGGTACACCAATGATTACGGTGGCAGCGATTTAGATTATCACTACGGCGAAATCAATTACTCC
TATGAGTTTGTTGAAAACTGGAGCCTCGATCTGCATTACGGCTACAACGTAGGCGATGCCTTAGACGATGGTGAAGGCTT
TGATAGCTACTCGGATTATTCCGTCGGCGTATCCACCGAATTTATGGGATTTGGCCTGTCACTCGCTTGGCTTGGCACCG
ACTTGAGCGGCGATCAGAAAGTCTCCGACGGTGTGTGGAAAAACGACGATACCGTATTAGCAAGCGTCAGTTACGCCTTC
TAA

Upstream 100 bases:

>100_bases
CCTGGGTTGTTGTTTGGCAAAGCAACGAATGTACTAGCCTGTTTTAAAAGCTAAAAGAACTTAGTACATCCGTGTCAATC
AAGAAAATGGGAGAAATACC

Downstream 100 bases:

>100_bases
TTCACGCCCTGCAAATACTAAAAAGCCCTCTGATGAGGGCTTTTTTACATCGCTTGGTAACTGATTACCAGTGACGCATC
TTATGACCTTTCACGGCATA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
MNNNLNKKRLAQVVGLALTTSLFSGIAAAEVSGEISVTNDYRFRGISQTAGDPAVQGGVDWSFESGFSVGAWASNVDFDE
PGYNGPDIEYDFYVAYGGDINDNVSYDVTLNRYNYSGESDLGYFEVTAGVEFSGFRVAYWYTNDYGGSDLDYHYGEINYS
YEFVENWSLDLHYGYNVGDALDDGEGFDSYSDYSVGVSTEFMGFGLSLAWLGTDLSGDQKVSDGVWKNDDTVLASVSYAF

Sequences:

>Translated_240_residues
MNNNLNKKRLAQVVGLALTTSLFSGIAAAEVSGEISVTNDYRFRGISQTAGDPAVQGGVDWSFESGFSVGAWASNVDFDE
PGYNGPDIEYDFYVAYGGDINDNVSYDVTLNRYNYSGESDLGYFEVTAGVEFSGFRVAYWYTNDYGGSDLDYHYGEINYS
YEFVENWSLDLHYGYNVGDALDDGEGFDSYSDYSVGVSTEFMGFGLSLAWLGTDLSGDQKVSDGVWKNDDTVLASVSYAF
>Mature_240_residues
MNNNLNKKRLAQVVGLALTTSLFSGIAAAEVSGEISVTNDYRFRGISQTAGDPAVQGGVDWSFESGFSVGAWASNVDFDE
PGYNGPDIEYDFYVAYGGDINDNVSYDVTLNRYNYSGESDLGYFEVTAGVEFSGFRVAYWYTNDYGGSDLDYHYGEINYS
YEFVENWSLDLHYGYNVGDALDDGEGFDSYSDYSVGVSTEFMGFGLSLAWLGTDLSGDQKVSDGVWKNDDTVLASVSYAF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26345; Mature: 26345

Theoretical pI: Translated: 3.60; Mature: 3.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNNLNKKRLAQVVGLALTTSLFSGIAAAEVSGEISVTNDYRFRGISQTAGDPAVQGGVD
CCCCCCHHHHHHHHHHHHHHHHHHCEEEEECCCEEEECCCEEEEECCCCCCCCCCCCCCC
WSFESGFSVGAWASNVDFDEPGYNGPDIEYDFYVAYGGDINDNVSYDVTLNRYNYSGESD
CCCCCCCEECCEECCCCCCCCCCCCCCEEEEEEEEECCCCCCCEEEEEEEEEEECCCCCC
LGYFEVTAGVEFSGFRVAYWYTNDYGGSDLDYHYGEINYSYEFVENWSLDLHYGYNVGDA
CCEEEEECCCEECCEEEEEEEECCCCCCCCCEEECEEEEEEEEEECCEEEEEECCCCCCC
LDDGEGFDSYSDYSVGVSTEFMGFGLSLAWLGTDLSGDQKVSDGVWKNDDTVLASVSYAF
CCCCCCCCCCCCEEECCCEEEHCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEECC
>Mature Secondary Structure
MNNNLNKKRLAQVVGLALTTSLFSGIAAAEVSGEISVTNDYRFRGISQTAGDPAVQGGVD
CCCCCCHHHHHHHHHHHHHHHHHHCEEEEECCCEEEECCCEEEEECCCCCCCCCCCCCCC
WSFESGFSVGAWASNVDFDEPGYNGPDIEYDFYVAYGGDINDNVSYDVTLNRYNYSGESD
CCCCCCCEECCEECCCCCCCCCCCCCCEEEEEEEEECCCCCCCEEEEEEEEEEECCCCCC
LGYFEVTAGVEFSGFRVAYWYTNDYGGSDLDYHYGEINYSYEFVENWSLDLHYGYNVGDA
CCEEEEECCCEECCEEEEEEEECCCCCCCCCEEECEEEEEEEEEECCEEEEEECCCCCCC
LDDGEGFDSYSDYSVGVSTEFMGFGLSLAWLGTDLSGDQKVSDGVWKNDDTVLASVSYAF
CCCCCCCCCCCCEEECCCEEEHCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA