Definition Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence.
Accession NC_008577
Length 4,972,204

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The map label for this gene is 117921556

Identifier: 117921556

GI number: 117921556

Start: 3741723

End: 3742625

Strand: Direct

Name: 117921556

Synonym: Shewana3_3118

Alternate gene names: NA

Gene position: 3741723-3742625 (Clockwise)

Preceding gene: 117921547

Following gene: 117921560

Centisome position: 75.25

GC content: 47.07

Gene sequence:

>903_bases
ATGCTGCCATATGGCCTTATCTTCAAACGCAGAAAGATTAATCTCAGCCAATATTATCGACCGATGGCAATCGTCCTTGT
GCTATTGAGTGCATGGCTATGTTGGTTAGTCCAATTTCATCAACCCGTTGAGTTAATAAAACAATACGGTCAGTTTCTGT
TTTTGGGGATAACGGGAGCCATCTTTGCAAACGCTACGGGAGCGGGAGGTGGCGTGATCTTTATTCCGGTGTTTTCCAGC
TTAAATTTCAGTGAAGCTCAGAGTGTCTCCACCTCATTTATGATCCAATGTTTTGGTATGACGGCAGGGGCGATTTCATG
GTCAGGCTACTATCGACGACACCATCATCAGGACAAAACCTGGTCTGGTTTTATTCCAAGCATTTTATTAGCGGCGACCT
GCTCAATACTTGGCCTTTGGAGCAGTCAGTTATGGCACTTGAACTCCCCTTCCTCACTGCATACTAGCTTTAGCCTTTTC
TCTATCATATTAGGGATAGCGATCATTATCAGCAGCCAGCGCCGTACCCTTCAAAGCCATCGCCTCAACGCCCTAGACTA
TTGCTGGCTAGCAATAATTGGCTATTTGGGCGGGATTATCACCGCTTGGTTATCAGTTGGCGTGGGCGAACTCTTAGTGA
TCTATCTGATGTTACGGGGAGTGTGTGCCAAGATGGCCGTTGCCATCGGAGTGGTGGTATCGGCGATTACCGTCTGGTCG
GCAAGCCCGATACATGTGTTTGCAAGTGACAGTCACGCCCTATTCGAGCTAGTACTGTTTGCAGGCCCAGGCGCAATTAT
CGGCGGTTTGTTAGCGCGGAAACTAGCGCTATTTCTCCCAGTCAAAACCTTAAAGCTGTTTTTCTCAAGTTGGATTATCT
TGACTGGCTTTGTAATGATTTGA

Upstream 100 bases:

>100_bases
TAGATTATGTTTTAACTTTTTATTTCCATACCAGTGTGACAACGCTGTCTTTGACTGATAACATGCATGCAACAACTCTC
ATCCCGCGTAATCACTCAAA

Downstream 100 bases:

>100_bases
CCTTCTGCTATACGGAAATTTAAGCTGAAAATGTTACTCAATCCAGCGGAGGGAAGCCGACCTCTATCACTAAACAAGTC
CGAGGCAAGGTGTTTTTATG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MLPYGLIFKRRKINLSQYYRPMAIVLVLLSAWLCWLVQFHQPVELIKQYGQFLFLGITGAIFANATGAGGGVIFIPVFSS
LNFSEAQSVSTSFMIQCFGMTAGAISWSGYYRRHHHQDKTWSGFIPSILLAATCSILGLWSSQLWHLNSPSSLHTSFSLF
SIILGIAIIISSQRRTLQSHRLNALDYCWLAIIGYLGGIITAWLSVGVGELLVIYLMLRGVCAKMAVAIGVVVSAITVWS
ASPIHVFASDSHALFELVLFAGPGAIIGGLLARKLALFLPVKTLKLFFSSWIILTGFVMI

Sequences:

>Translated_300_residues
MLPYGLIFKRRKINLSQYYRPMAIVLVLLSAWLCWLVQFHQPVELIKQYGQFLFLGITGAIFANATGAGGGVIFIPVFSS
LNFSEAQSVSTSFMIQCFGMTAGAISWSGYYRRHHHQDKTWSGFIPSILLAATCSILGLWSSQLWHLNSPSSLHTSFSLF
SIILGIAIIISSQRRTLQSHRLNALDYCWLAIIGYLGGIITAWLSVGVGELLVIYLMLRGVCAKMAVAIGVVVSAITVWS
ASPIHVFASDSHALFELVLFAGPGAIIGGLLARKLALFLPVKTLKLFFSSWIILTGFVMI
>Mature_300_residues
MLPYGLIFKRRKINLSQYYRPMAIVLVLLSAWLCWLVQFHQPVELIKQYGQFLFLGITGAIFANATGAGGGVIFIPVFSS
LNFSEAQSVSTSFMIQCFGMTAGAISWSGYYRRHHHQDKTWSGFIPSILLAATCSILGLWSSQLWHLNSPSSLHTSFSLF
SIILGIAIIISSQRRTLQSHRLNALDYCWLAIIGYLGGIITAWLSVGVGELLVIYLMLRGVCAKMAVAIGVVVSAITVWS
ASPIHVFASDSHALFELVLFAGPGAIIGGLLARKLALFLPVKTLKLFFSSWIILTGFVMI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32952; Mature: 32952

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPYGLIFKRRKINLSQYYRPMAIVLVLLSAWLCWLVQFHQPVELIKQYGQFLFLGITGA
CCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHEEEHHHHHH
IFANATGAGGGVIFIPVFSSLNFSEAQSVSTSFMIQCFGMTAGAISWSGYYRRHHHQDKT
HHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCC
WSGFIPSILLAATCSILGLWSSQLWHLNSPSSLHTSFSLFSIILGIAIIISSQRRTLQSH
CCCHHHHHHHHHHHHHHHHHHHHCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLNALDYCWLAIIGYLGGIITAWLSVGVGELLVIYLMLRGVCAKMAVAIGVVVSAITVWS
CCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
ASPIHVFASDSHALFELVLFAGPGAIIGGLLARKLALFLPVKTLKLFFSSWIILTGFVMI
CCCEEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLPYGLIFKRRKINLSQYYRPMAIVLVLLSAWLCWLVQFHQPVELIKQYGQFLFLGITGA
CCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHEEEHHHHHH
IFANATGAGGGVIFIPVFSSLNFSEAQSVSTSFMIQCFGMTAGAISWSGYYRRHHHQDKT
HHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCC
WSGFIPSILLAATCSILGLWSSQLWHLNSPSSLHTSFSLFSIILGIAIIISSQRRTLQSH
CCCHHHHHHHHHHHHHHHHHHHHCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLNALDYCWLAIIGYLGGIITAWLSVGVGELLVIYLMLRGVCAKMAVAIGVVVSAITVWS
CCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
ASPIHVFASDSHALFELVLFAGPGAIIGGLLARKLALFLPVKTLKLFFSSWIILTGFVMI
CCCEEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA