Definition Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence.
Accession NC_008577
Length 4,972,204

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The map label for this gene is 117921546

Identifier: 117921546

GI number: 117921546

Start: 3728256

End: 3728615

Strand: Direct

Name: 117921546

Synonym: Shewana3_3108

Alternate gene names: NA

Gene position: 3728256-3728615 (Clockwise)

Preceding gene: 117921545

Following gene: 117921547

Centisome position: 74.98

GC content: 48.33

Gene sequence:

>360_bases
ATGAGCATCACGTCGATCATTCGCTTTGCTAGCGCACAGTCGCCGATGGAAAGTTACCAAGTTGCCCCAGAAAAGCGCAT
CTCTGGTAATCCCACCCAGCAATTACAGAATCATTACTCTAGTCCCTGTAATCAATTCCACAGTGGAATTTGGCAAAGCG
AATCAGGTGCTTGGAAAATCAACTACACTGAATACGAGTATTGCGAGATCCTCGAAGGGACCAGCGTCATCACAGATCTT
GAGGGGCAGTCACAAACCTTCACTGTCGGCGACCGATTTATTATTCCTGCGGGGTTCCAAGGGCAGTGGCAAGTTGTAGA
GCCCTGCCGCAAGGTTTATGTCATCTTCGAACAAAAGTGA

Upstream 100 bases:

>100_bases
AACGTAAAGCCATCACGGCACGCTGGCCCGTAGGCAAACAGACTCAAGCTGAGTTTGTTATGCCCACCATGAAATAACTT
CGACTGGAGCCAATATAACA

Downstream 100 bases:

>100_bases
GTTTCATAGGGGGTGCTTTTTGCCTCGATTAACCAAGCTAAAGCAATTTAGCTTAACTCGCCATGAGGTCACAGCTACGG
GGTTTCCTGGGTTGTTGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 119; Mature: 118

Protein sequence:

>119_residues
MSITSIIRFASAQSPMESYQVAPEKRISGNPTQQLQNHYSSPCNQFHSGIWQSESGAWKINYTEYEYCEILEGTSVITDL
EGQSQTFTVGDRFIIPAGFQGQWQVVEPCRKVYVIFEQK

Sequences:

>Translated_119_residues
MSITSIIRFASAQSPMESYQVAPEKRISGNPTQQLQNHYSSPCNQFHSGIWQSESGAWKINYTEYEYCEILEGTSVITDL
EGQSQTFTVGDRFIIPAGFQGQWQVVEPCRKVYVIFEQK
>Mature_118_residues
SITSIIRFASAQSPMESYQVAPEKRISGNPTQQLQNHYSSPCNQFHSGIWQSESGAWKINYTEYEYCEILEGTSVITDLE
GQSQTFTVGDRFIIPAGFQGQWQVVEPCRKVYVIFEQK

Specific function: Unknown

COG id: COG3450

COG function: function code R; Predicted enzyme of the cupin superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13578; Mature: 13447

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSITSIIRFASAQSPMESYQVAPEKRISGNPTQQLQNHYSSPCNQFHSGIWQSESGAWKI
CCHHHHHHHHCCCCCHHHHCCCCCCCCCCCCHHHHHHHHCCHHHHHHHCCCCCCCCCEEE
NYTEYEYCEILEGTSVITDLEGQSQTFTVGDRFIIPAGFQGQWQVVEPCRKVYVIFEQK
ECCCCHHHHHHCCCCEEEECCCCCEEEEECCEEEEECCCCCCCHHHCCCCEEEEEEECC
>Mature Secondary Structure 
SITSIIRFASAQSPMESYQVAPEKRISGNPTQQLQNHYSSPCNQFHSGIWQSESGAWKI
CHHHHHHHHCCCCCHHHHCCCCCCCCCCCCHHHHHHHHCCHHHHHHHCCCCCCCCCEEE
NYTEYEYCEILEGTSVITDLEGQSQTFTVGDRFIIPAGFQGQWQVVEPCRKVYVIFEQK
ECCCCHHHHHHCCCCEEEECCCCCEEEEECCEEEEECCCCCCCHHHCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA