| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117921494
Identifier: 117921494
GI number: 117921494
Start: 3663115
End: 3663606
Strand: Direct
Name: 117921494
Synonym: Shewana3_3056
Alternate gene names: NA
Gene position: 3663115-3663606 (Clockwise)
Preceding gene: 117921493
Following gene: 117921495
Centisome position: 73.67
GC content: 46.75
Gene sequence:
>492_bases TTGCGAATATTGTGTCTTTTAGTCTGTCTTATTTGGGTTCCGGCTTTGTTTCCTGCGTCTGTACACGCTAACTCAGGGGA AATGCCAGCAGAACAGCAGTTAGCCGTAAAATACATGAACGCGCTAACCGAGCACGACTATCAAACACTCGGCAAATTCT ATAACCGTGATACCGTCTTCTTCGATAAAACCGCCAATCGTAAATACACGGGTGGGCGGTTTATTATCGATTTCCTCGAG CGCGCCCACGAGGGTGTGCTCGAATATGATTTCAATATCGAGCATATGTATAACGCAGGCTCCCTCGTGGTGATGATTGG TAACTATCACTTTAAGGGACCCGGCGAGCAGTTTGGTAAACCCGGAAAAATTATTGATGTCGCCATTCCTGGGGTCACCA GTCTTAAGCTCGATATGCGTAATCACAGGGTCACAGAGCATGTGGATCTGATTGATTACCAGACCATGTCAGACCAATTA GCGATGCAGTAG
Upstream 100 bases:
>100_bases CTATTTTTAGCCATGACCAGTGCCTTAATCATTCGCCTATGCGCCATCAAATGGCATTTGTCGTTACCCGCCTTTGATCT CAAAACCAAGAGGGAATAGT
Downstream 100 bases:
>100_bases TCACAAAATTTAGCTTTTGTTGAAACTTGAGCCCTCAAAACGAGTCGAAACCTACAATGAGTCAATACGACTGAGGTGCG GCATTCTTTGCCCACGGGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 163; Mature: 163
Protein sequence:
>163_residues MRILCLLVCLIWVPALFPASVHANSGEMPAEQQLAVKYMNALTEHDYQTLGKFYNRDTVFFDKTANRKYTGGRFIIDFLE RAHEGVLEYDFNIEHMYNAGSLVVMIGNYHFKGPGEQFGKPGKIIDVAIPGVTSLKLDMRNHRVTEHVDLIDYQTMSDQL AMQ
Sequences:
>Translated_163_residues MRILCLLVCLIWVPALFPASVHANSGEMPAEQQLAVKYMNALTEHDYQTLGKFYNRDTVFFDKTANRKYTGGRFIIDFLE RAHEGVLEYDFNIEHMYNAGSLVVMIGNYHFKGPGEQFGKPGKIIDVAIPGVTSLKLDMRNHRVTEHVDLIDYQTMSDQL AMQ >Mature_163_residues MRILCLLVCLIWVPALFPASVHANSGEMPAEQQLAVKYMNALTEHDYQTLGKFYNRDTVFFDKTANRKYTGGRFIIDFLE RAHEGVLEYDFNIEHMYNAGSLVVMIGNYHFKGPGEQFGKPGKIIDVAIPGVTSLKLDMRNHRVTEHVDLIDYQTMSDQL AMQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18604; Mature: 18604
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRILCLLVCLIWVPALFPASVHANSGEMPAEQQLAVKYMNALTEHDYQTLGKFYNRDTVF CHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE FDKTANRKYTGGRFIIDFLERAHEGVLEYDFNIEHMYNAGSLVVMIGNYHFKGPGEQFGK EECCCCCCCCCCHHHHHHHHHHHCCCEEECCCEEEEECCCCEEEEECCEEECCCCHHHCC PGKIIDVAIPGVTSLKLDMRNHRVTEHVDLIDYQTMSDQLAMQ CCCEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRILCLLVCLIWVPALFPASVHANSGEMPAEQQLAVKYMNALTEHDYQTLGKFYNRDTVF CHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE FDKTANRKYTGGRFIIDFLERAHEGVLEYDFNIEHMYNAGSLVVMIGNYHFKGPGEQFGK EECCCCCCCCCCHHHHHHHHHHHCCCEEECCCEEEEECCCCEEEEECCEEECCCCHHHCC PGKIIDVAIPGVTSLKLDMRNHRVTEHVDLIDYQTMSDQLAMQ CCCEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA