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The map label for this gene is 117921492

Identifier: 117921492

GI number: 117921492

Start: 3662113

End: 3662490

Strand: Direct

Name: 117921492

Synonym: Shewana3_3054

Alternate gene names: NA

Gene position: 3662113-3662490 (Clockwise)

Preceding gene: 117921491

Following gene: 117921493

Centisome position: 73.65

GC content: 47.35

Gene sequence:

>378_bases
ATGCATGTTTCATTAACAACTCCCGCCTTGCTATTTCCGGCAATCTCACTGCTATTACTAGCCTATACCAACCGCTTCTT
TGCGCTGGCGGCGCTGATCCGTCAGCTCAGTAACGGCGACAAACCCGTGCATAAGGATCAGATTAAAAACTTAAGCCAGC
GGATCCGGATTATTCGCCGCATGCAGGAGGCGGGCGTATCCAGCTTTGCCCTGTGTGTGCTCTGTATGATTTTCATCTAT
ATCGGTTTTAATAAGACGGGCTCGGTGATCTTCGGTGCCAGCTTGTTACTGCTGCTCTATTCACTGATTTTATCTGTGAT
AGAAATTCGTATCTCTGTGGACGCGCTGAACATCCACATCAAAGAGATGAGTAAATGA

Upstream 100 bases:

>100_bases
CTTCCGATCATTTGGGCGGGTTTACGCTGGCTACAAACCCTGTGATATGATGCCTTTAATCTTAACATTAGGTTAAAGGC
TGACTATCTTGTTCGAAAAC

Downstream 100 bases:

>100_bases
GCCACTGGATTTACTTCTTCGATTTATGTGGCACGGCGGTATTTGCCCTTTCTGGCGCCTTAGCCGCTGGGCGTCACCGT
ATGGACCCCTTTGGCGTTAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 125; Mature: 125

Protein sequence:

>125_residues
MHVSLTTPALLFPAISLLLLAYTNRFFALAALIRQLSNGDKPVHKDQIKNLSQRIRIIRRMQEAGVSSFALCVLCMIFIY
IGFNKTGSVIFGASLLLLLYSLILSVIEIRISVDALNIHIKEMSK

Sequences:

>Translated_125_residues
MHVSLTTPALLFPAISLLLLAYTNRFFALAALIRQLSNGDKPVHKDQIKNLSQRIRIIRRMQEAGVSSFALCVLCMIFIY
IGFNKTGSVIFGASLLLLLYSLILSVIEIRISVDALNIHIKEMSK
>Mature_125_residues
MHVSLTTPALLFPAISLLLLAYTNRFFALAALIRQLSNGDKPVHKDQIKNLSQRIRIIRRMQEAGVSSFALCVLCMIFIY
IGFNKTGSVIFGASLLLLLYSLILSVIEIRISVDALNIHIKEMSK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13976; Mature: 13976

Theoretical pI: Translated: 10.46; Mature: 10.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHVSLTTPALLFPAISLLLLAYTNRFFALAALIRQLSNGDKPVHKDQIKNLSQRIRIIRR
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
MQEAGVSSFALCVLCMIFIYIGFNKTGSVIFGASLLLLLYSLILSVIEIRISVDALNIHI
HHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KEMSK
HHCCC
>Mature Secondary Structure
MHVSLTTPALLFPAISLLLLAYTNRFFALAALIRQLSNGDKPVHKDQIKNLSQRIRIIRR
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
MQEAGVSSFALCVLCMIFIYIGFNKTGSVIFGASLLLLLYSLILSVIEIRISVDALNIHI
HHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KEMSK
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA