| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117921285
Identifier: 117921285
GI number: 117921285
Start: 3404957
End: 3405271
Strand: Direct
Name: 117921285
Synonym: Shewana3_2844
Alternate gene names: NA
Gene position: 3404957-3405271 (Clockwise)
Preceding gene: 117921284
Following gene: 117921286
Centisome position: 68.48
GC content: 38.41
Gene sequence:
>315_bases ATGAGCATAGAAGATCAAGATTCAATTGACGCCATTGGAATAGATAATGAAGGTGTCGTCGTGCTAACCATCTCAGATCA TTTGGAATGGGATGATAAGCATCTCTTACTCCTTCAGGAAAAGATTAATATCTACTTGGCTTTTCTCGAGTCTGGCGAGG TATTTGAAAGCTATCCAGATTCACGTGGGAGAGAGTTTAAAATTAATATTATGTGCAAATATGAGCCAACAGCATTAGCT ACGCGGTTCCTATCACAATGCACAGACATCATTAATCAAGTAGGAATTCAGTTTGGTTATCAGGTTTTCACTTAG
Upstream 100 bases:
>100_bases AATCACAACAAAAAATAAACAGTTAAATCATAACCTTGAGTTTTTCCACTTCAAATTATTGAAGGTGAGATTTGCCGCAA TCCATTAGAGTTGAATATCT
Downstream 100 bases:
>100_bases CCAAACAGTATCACCTTAGCCTAGCGCAGAAAACCGCATGTTTTCCCACTGTTGTCGGCGTAAAACGGCTTGGCGGGCTA CTGTCGTAGCTTTGACGTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 104; Mature: 103
Protein sequence:
>104_residues MSIEDQDSIDAIGIDNEGVVVLTISDHLEWDDKHLLLLQEKINIYLAFLESGEVFESYPDSRGREFKINIMCKYEPTALA TRFLSQCTDIINQVGIQFGYQVFT
Sequences:
>Translated_104_residues MSIEDQDSIDAIGIDNEGVVVLTISDHLEWDDKHLLLLQEKINIYLAFLESGEVFESYPDSRGREFKINIMCKYEPTALA TRFLSQCTDIINQVGIQFGYQVFT >Mature_103_residues SIEDQDSIDAIGIDNEGVVVLTISDHLEWDDKHLLLLQEKINIYLAFLESGEVFESYPDSRGREFKINIMCKYEPTALAT RFLSQCTDIINQVGIQFGYQVFT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11908; Mature: 11776
Theoretical pI: Translated: 4.03; Mature: 4.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIEDQDSIDAIGIDNEGVVVLTISDHLEWDDKHLLLLQEKINIYLAFLESGEVFESYPD CCCCCCCCEEEEEECCCCEEEEEEECCCCCCCCEEEEEEECEEEEEEEECCCCHHHCCCC SRGREFKINIMCKYEPTALATRFLSQCTDIINQVGIQFGYQVFT CCCCEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCEEECC >Mature Secondary Structure SIEDQDSIDAIGIDNEGVVVLTISDHLEWDDKHLLLLQEKINIYLAFLESGEVFESYPD CCCCCCCEEEEEECCCCEEEEEEECCCCCCCCEEEEEEECEEEEEEEECCCCHHHCCCC SRGREFKINIMCKYEPTALATRFLSQCTDIINQVGIQFGYQVFT CCCCEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA