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The map label for this gene is 117921286

Identifier: 117921286

GI number: 117921286

Start: 3405443

End: 3405871

Strand: Direct

Name: 117921286

Synonym: Shewana3_2845

Alternate gene names: NA

Gene position: 3405443-3405871 (Clockwise)

Preceding gene: 117921285

Following gene: 117921288

Centisome position: 68.49

GC content: 41.72

Gene sequence:

>429_bases
ATGGAACAAATGATAAACAAAGACTTAGTGAAAAAGCTTCGAAGCGAACGTTCTTGGTCCCAAGATCAACTCGCCACAAT
CTCAGGACTGAGCATTCGTACTATTCAGAGAGTAGAGAGTGAAGGATCTGGCTCCTTAGAATCCAAAAGAGCGCTAGCGG
CAGCTTTTGATATTAACGTTAGTAATCTGGATATTAATAGCACCGCAGCCAGCACCTTAGCATCCAGTCATCGAGGTTGT
AAGTTTGGGCTAGCTGGTGCAACTGTGGGTATTTTGAGCGCCTATATTGGAATATCTATATCTTTTACATCAGGAGATAT
TATGTCCGCTGAAGCAGGGATTCATTATGGAAGTCTTGGTGCGCTCTATGGTATTTCCTGTACAGTTATTATCGTAATGT
CTAACAGATATCATTCAAACCCTAAGTGA

Upstream 100 bases:

>100_bases
GGCGGGCTACTGTCGTAGCTTTGACGTAAGGTTGTCATAACTAAAATCATGGGTTCTAGATGATGATTCGCCTACTGCAA
TTATTATTAGGAACTAGAAA

Downstream 100 bases:

>100_bases
TAAGACACATCACAGCTGTATTGCGACTGTTAGCGTTTGTGCAGATGCAAGAGCTAAGAACTTTCCGCAAGGTACTGTCT
GCCGTATTATCAATCTAGCA

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator XRE Family; XRE Family Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MEQMINKDLVKKLRSERSWSQDQLATISGLSIRTIQRVESEGSGSLESKRALAAAFDINVSNLDINSTAASTLASSHRGC
KFGLAGATVGILSAYIGISISFTSGDIMSAEAGIHYGSLGALYGISCTVIIVMSNRYHSNPK

Sequences:

>Translated_142_residues
MEQMINKDLVKKLRSERSWSQDQLATISGLSIRTIQRVESEGSGSLESKRALAAAFDINVSNLDINSTAASTLASSHRGC
KFGLAGATVGILSAYIGISISFTSGDIMSAEAGIHYGSLGALYGISCTVIIVMSNRYHSNPK
>Mature_142_residues
MEQMINKDLVKKLRSERSWSQDQLATISGLSIRTIQRVESEGSGSLESKRALAAAFDINVSNLDINSTAASTLASSHRGC
KFGLAGATVGILSAYIGISISFTSGDIMSAEAGIHYGSLGALYGISCTVIIVMSNRYHSNPK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15045; Mature: 15045

Theoretical pI: Translated: 8.71; Mature: 8.71

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQMINKDLVKKLRSERSWSQDQLATISGLSIRTIQRVESEGSGSLESKRALAAAFDINV
CCHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHEEHEEECCC
SNLDINSTAASTLASSHRGCKFGLAGATVGILSAYIGISISFTSGDIMSAEAGIHYGSLG
CCCCCCHHHHHHHHHCCCCCEEECCHHHHHHHHHHHCEEEEECCCCEEECCCCCCCCCHH
ALYGISCTVIIVMSNRYHSNPK
HHHCCEEEEEEEECCCCCCCCC
>Mature Secondary Structure
MEQMINKDLVKKLRSERSWSQDQLATISGLSIRTIQRVESEGSGSLESKRALAAAFDINV
CCHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHEEHEEECCC
SNLDINSTAASTLASSHRGCKFGLAGATVGILSAYIGISISFTSGDIMSAEAGIHYGSLG
CCCCCCHHHHHHHHHCCCCCEEECCHHHHHHHHHHHCEEEEECCCCEEECCCCCCCCCHH
ALYGISCTVIIVMSNRYHSNPK
HHHCCEEEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA