| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is cysQ [H]
Identifier: 117921232
GI number: 117921232
Start: 3330984
End: 3331790
Strand: Reverse
Name: cysQ [H]
Synonym: Shewana3_2791
Alternate gene names: 117921232
Gene position: 3331790-3330984 (Counterclockwise)
Preceding gene: 117921233
Following gene: 117921231
Centisome position: 67.01
GC content: 50.31
Gene sequence:
>807_bases GTGACAGATAATACAGTGATGGCAGCGCATTTTTCGAAGGCCGATTTACTGCGGGTGGTAAAGATTGCCCATGCGGCAGG CGACGCCATCATGGCAATTTATGCCCAAGAGGATTTTGCCGTTACGCAAAAGCGTGATGAGAGCCCGGTAACGGCGGCCG ATTTGGTGGCTCACAAAGTTATCTTAGCCCAGCTTACCGAGCAATTTGCGGGCATTCCCGTGATGTCGGAAGAAGCGGCG GATATCGCCTGGGATGAACGTCGGCACTGGCAGACCTATTGGCTGATTGACCCTTTGGATGGCACTAAGGAATTTATTAA GCGAAATGGTGAGTTTACCGTCAATATTGCGCTTATCCATCAAGGTGTGGCTATTGCTGGTGTGGTTTATGCTCCCGTAC TCAATACCGTTTATTTTGGCGCCAAACACTTAGGCGCTTGGCGACAGGATGGGCAACAAGAGCTAGTGCTACAGGGCTGT AATACGCCAAGGCAAATACCGATAGTGGTGGGTAGTCGTTCGCACTTAAGCCCTGATGTGGCGGAATATTTAAAGGATTT CGGTCAACACGAGATGTTAAGCGTGGGAAGCTCGCTGAAGTTTTGTATGTTGGCAGAGGGCAAGGCCGATCTCTATCCAA GATTAGGGCCTACGAGCGAATGGGATACGGCAGCCGCGCAGGCCGTGCTGGAAAGCGCAGGCGGCAAAGTTGTGTGTTAT GACTCAGGTTTACCCTTAACCTACAATCAAAAACCTGACATATTAAACCCTTATTTTATTGCCACGGCACCAGGCTGGGC AGAATAA
Upstream 100 bases:
>100_bases GCCTTAGTCGATTTTGCTCGATATATGATGAATTTGTTCTTAATTATCAATTGCTGCCAGTGGCATAATGCCGAAAAGCA AATCGAATACAGGTGGCTAA
Downstream 100 bases:
>100_bases CGAACAATGCCAAGGGCATCTGTACTGACGCCTTGGTCGAATAACAGTGGAGTAAGTCATTCATGATACGCATGGGCATC GATTTAGGTGGCACAAAAAT
Product: 3'(2'),5'-bisphosphate nucleotidase
Products: NA
Alternate protein names: 3'(2'),5-bisphosphonucleoside 3'(2')-phosphohydrolase; 3'-phosphoadenosine 5'-phosphate phosphatase; PAP phosphatase; DPNPase [H]
Number of amino acids: Translated: 268; Mature: 267
Protein sequence:
>268_residues MTDNTVMAAHFSKADLLRVVKIAHAAGDAIMAIYAQEDFAVTQKRDESPVTAADLVAHKVILAQLTEQFAGIPVMSEEAA DIAWDERRHWQTYWLIDPLDGTKEFIKRNGEFTVNIALIHQGVAIAGVVYAPVLNTVYFGAKHLGAWRQDGQQELVLQGC NTPRQIPIVVGSRSHLSPDVAEYLKDFGQHEMLSVGSSLKFCMLAEGKADLYPRLGPTSEWDTAAAQAVLESAGGKVVCY DSGLPLTYNQKPDILNPYFIATAPGWAE
Sequences:
>Translated_268_residues MTDNTVMAAHFSKADLLRVVKIAHAAGDAIMAIYAQEDFAVTQKRDESPVTAADLVAHKVILAQLTEQFAGIPVMSEEAA DIAWDERRHWQTYWLIDPLDGTKEFIKRNGEFTVNIALIHQGVAIAGVVYAPVLNTVYFGAKHLGAWRQDGQQELVLQGC NTPRQIPIVVGSRSHLSPDVAEYLKDFGQHEMLSVGSSLKFCMLAEGKADLYPRLGPTSEWDTAAAQAVLESAGGKVVCY DSGLPLTYNQKPDILNPYFIATAPGWAE >Mature_267_residues TDNTVMAAHFSKADLLRVVKIAHAAGDAIMAIYAQEDFAVTQKRDESPVTAADLVAHKVILAQLTEQFAGIPVMSEEAAD IAWDERRHWQTYWLIDPLDGTKEFIKRNGEFTVNIALIHQGVAIAGVVYAPVLNTVYFGAKHLGAWRQDGQQELVLQGCN TPRQIPIVVGSRSHLSPDVAEYLKDFGQHEMLSVGSSLKFCMLAEGKADLYPRLGPTSEWDTAAAQAVLESAGGKVVCYD SGLPLTYNQKPDILNPYFIATAPGWAE
Specific function: Converts 3'(2')-phosphoadenosine 5'-phosphate (PAP) to AMP. May also convert adenosine 3'-phosphate 5'-phosphosulfate (PAPS) to adenosine 5'-phosphosulfate (APS) [H]
COG id: COG1218
COG function: function code P; 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase
Gene ontology:
Cell location: Cytoplasm. Cell inner membrane; Peripheral membrane protein; Cytoplasmic side [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the inositol monophosphatase family [H]
Homologues:
Organism=Homo sapiens, GI7657236, Length=237, Percent_Identity=29.957805907173, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI116812595, Length=260, Percent_Identity=28.0769230769231, Blast_Score=71, Evalue=8e-13, Organism=Homo sapiens, GI5031789, Length=223, Percent_Identity=26.0089686098655, Blast_Score=68, Evalue=1e-11, Organism=Homo sapiens, GI221625487, Length=223, Percent_Identity=26.0089686098655, Blast_Score=67, Evalue=1e-11, Organism=Escherichia coli, GI1790659, Length=252, Percent_Identity=50.3968253968254, Blast_Score=218, Evalue=3e-58, Organism=Escherichia coli, GI1788882, Length=229, Percent_Identity=27.0742358078603, Blast_Score=74, Evalue=1e-14, Organism=Caenorhabditis elegans, GI71995897, Length=268, Percent_Identity=26.865671641791, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI71995905, Length=268, Percent_Identity=26.865671641791, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17537869, Length=310, Percent_Identity=25.4838709677419, Blast_Score=70, Evalue=2e-12, Organism=Caenorhabditis elegans, GI193202572, Length=244, Percent_Identity=25.8196721311475, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI24651149, Length=249, Percent_Identity=26.1044176706827, Blast_Score=72, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006240 - InterPro: IPR020583 - InterPro: IPR000760 - InterPro: IPR020550 [H]
Pfam domain/function: PF00459 Inositol_P [H]
EC number: =3.1.3.7 [H]
Molecular weight: Translated: 29328; Mature: 29196
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: PS00629 IMP_1 ; PS00630 IMP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDNTVMAAHFSKADLLRVVKIAHAAGDAIMAIYAQEDFAVTQKRDESPVTAADLVAHKV CCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEEEECCCEEECCCCCCCCCHHHHHHHHHH ILAQLTEQFAGIPVMSEEAADIAWDERRHWQTYWLIDPLDGTKEFIKRNGEFTVNIALIH HHHHHHHHHCCCCCCCCCCCCCCHHCCCCEEEEEEEECCCCHHHHHHCCCCEEEEEEEEE QGVAIAGVVYAPVLNTVYFGAKHLGAWRQDGQQELVLQGCNTPRQIPIVVGSRSHLSPDV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCEEEEEECCCCCCCHHH AEYLKDFGQHEMLSVGSSLKFCMLAEGKADLYPRLGPTSEWDTAAAQAVLESAGGKVVCY HHHHHHCCCHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEE DSGLPLTYNQKPDILNPYFIATAPGWAE ECCCCEEECCCCCCCCCEEEEECCCCCC >Mature Secondary Structure TDNTVMAAHFSKADLLRVVKIAHAAGDAIMAIYAQEDFAVTQKRDESPVTAADLVAHKV CCCEEEEEECCHHHHHHHHHHHHHCCCEEEEEEECCCEEECCCCCCCCCHHHHHHHHHH ILAQLTEQFAGIPVMSEEAADIAWDERRHWQTYWLIDPLDGTKEFIKRNGEFTVNIALIH HHHHHHHHHCCCCCCCCCCCCCCHHCCCCEEEEEEEECCCCHHHHHHCCCCEEEEEEEEE QGVAIAGVVYAPVLNTVYFGAKHLGAWRQDGQQELVLQGCNTPRQIPIVVGSRSHLSPDV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCEEEEEECCCCCCCHHH AEYLKDFGQHEMLSVGSSLKFCMLAEGKADLYPRLGPTSEWDTAAAQAVLESAGGKVVCY HHHHHHCCCHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEE DSGLPLTYNQKPDILNPYFIATAPGWAE ECCCCEEECCCCCCCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11677608; 12644504 [H]