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The map label for this gene is nrfB [C]

Identifier: 117921113

GI number: 117921113

Start: 3190310

End: 3191275

Strand: Direct

Name: nrfB [C]

Synonym: Shewana3_2672

Alternate gene names: 117921113

Gene position: 3190310-3191275 (Clockwise)

Preceding gene: 117921109

Following gene: 117921114

Centisome position: 64.16

GC content: 49.17

Gene sequence:

>966_bases
ATGAACATGGATATTGGGTTAAAGTTCAAAAGCATAACTCAGGTTATGCTTGCTGTGATGTTATCGATACTCAGCCTTTC
AACGTTAGCGACACCTTGGGATGACAAGCCCCCCGAGGAGGTCGTCGCGACTTTGGACAAAAAATTTGCCGAAGGTAAGT
ACTCGGCCAAAGGGGCTGACACTTGCCTGATGTGCCATAAGAAAAGTGCCACTGTAATGGCTATTTTTGATGGCGTACAT
GGCAATCCTAATATCAAAGATTCCCCCATGGCCGATTTACAGTGTGAGGCTTGCCACGGCCCGCTCGGTAATCATAACAA
GGGCGGCAAAGAGCCGATGATCACCTTCGGCCAGAATTCCCCCGTTCCCGCGCAAAAACAAAACAGTGTCTGCATGAGTT
GCCATAACGACGATCAACGCATCGCGTGGAAAGGCAATCACCATGACAATGCCGATATCCCCTGCAGTAGCTGCCACCAA
GTACACGTAGCAAAAGACCCTATCAGCGACAAAGCCAACGAAGTGGCGATTTGTACCCAATGCCATACCCAGCAAAAAGC
GGATATGCACAAACGCTCATCCCATCCATTGCAATGGCAACAAATGGTCTGTAGCGATTGCCACAATCCCCATGGCAGTT
TAAATGATGCCAGTCTGAAGCAAATGAGCGTCAACGAAAACTGTTACAGCTGCCACGCTGAAAAACGCGGTCCTAAATTG
TGGGAACATGCGCCAGTCACCGATAATTGCGCGAACTGCCATAACCCCCACGGCAGCGTCAACGAATCCATGCTTATCAG
CAAACCGCCACAGTTATGCCAACAATGCCACGCCTCCGATGGCCACAGCAGTAATGCTTACTTTGGTAATCAAACCAACG
CCTTCACCTCGGGTAATTCCTGTATGAATTGCCATGGACAAGTGCATGGTTCAAACCATCCATCCGGCAAGTTACTCCAG
AGATAA

Upstream 100 bases:

>100_bases
AAATGTTACGCGATTGTCGCAAATTTGTTCTAGTATTAATCAGCTAAATTAGCGATGTCGAAAGCTTGAAAAATAACAAA
TAAAACGCACTCGGGAATAG

Downstream 100 bases:

>100_bases
CAAGGGAATGATCATGCAAATAATGAACATATCGACTCCTAAAGCTTGTTTCTCACTCACATTACTGGCTTGGGCGATTA
GTGGCGTCCTCAACACGGCC

Product: cytochrome C family protein

Products: oxidized cytochrome C552; NH3 [C]

Alternate protein names: Decaheme C-Type Cytochrome DmsE Family; Decaheme Cytochrome C MtrA; Multiheme Cytochrome; Decaheme Cytochrome C; Nitrate/TMAO Reductase; Doubled CXXCH Domain-Containing Protein; Multiheme C-Type Cytochrome; Cytochrome; Lipoprotein Cytochrome C; Decaheme Cytochrome C MtrD; Multiheme Cytochrome Family Protein; Double CXXCH Motif-Containing Protein; Cytochrome C; Cytochrome C-Type Protein NrfB

Number of amino acids: Translated: 321; Mature: 321

Protein sequence:

>321_residues
MNMDIGLKFKSITQVMLAVMLSILSLSTLATPWDDKPPEEVVATLDKKFAEGKYSAKGADTCLMCHKKSATVMAIFDGVH
GNPNIKDSPMADLQCEACHGPLGNHNKGGKEPMITFGQNSPVPAQKQNSVCMSCHNDDQRIAWKGNHHDNADIPCSSCHQ
VHVAKDPISDKANEVAICTQCHTQQKADMHKRSSHPLQWQQMVCSDCHNPHGSLNDASLKQMSVNENCYSCHAEKRGPKL
WEHAPVTDNCANCHNPHGSVNESMLISKPPQLCQQCHASDGHSSNAYFGNQTNAFTSGNSCMNCHGQVHGSNHPSGKLLQ
R

Sequences:

>Translated_321_residues
MNMDIGLKFKSITQVMLAVMLSILSLSTLATPWDDKPPEEVVATLDKKFAEGKYSAKGADTCLMCHKKSATVMAIFDGVH
GNPNIKDSPMADLQCEACHGPLGNHNKGGKEPMITFGQNSPVPAQKQNSVCMSCHNDDQRIAWKGNHHDNADIPCSSCHQ
VHVAKDPISDKANEVAICTQCHTQQKADMHKRSSHPLQWQQMVCSDCHNPHGSLNDASLKQMSVNENCYSCHAEKRGPKL
WEHAPVTDNCANCHNPHGSVNESMLISKPPQLCQQCHASDGHSSNAYFGNQTNAFTSGNSCMNCHGQVHGSNHPSGKLLQ
R
>Mature_321_residues
MNMDIGLKFKSITQVMLAVMLSILSLSTLATPWDDKPPEEVVATLDKKFAEGKYSAKGADTCLMCHKKSATVMAIFDGVH
GNPNIKDSPMADLQCEACHGPLGNHNKGGKEPMITFGQNSPVPAQKQNSVCMSCHNDDQRIAWKGNHHDNADIPCSSCHQ
VHVAKDPISDKANEVAICTQCHTQQKADMHKRSSHPLQWQQMVCSDCHNPHGSLNDASLKQMSVNENCYSCHAEKRGPKL
WEHAPVTDNCANCHNPHGSVNESMLISKPPQLCQQCHASDGHSSNAYFGNQTNAFTSGNSCMNCHGQVHGSNHPSGKLLQ
R

Specific function: Plays A Role In Nitrite Reduction. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35041; Mature: 35041

Theoretical pI: Translated: 7.29; Mature: 7.29

Prosite motif: PS51008 MULTIHEME_CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.2 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
10.6 %Cys+Met (Translated Protein)
6.2 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
10.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNMDIGLKFKSITQVMLAVMLSILSLSTLATPWDDKPPEEVVATLDKKFAEGKYSAKGAD
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC
TCLMCHKKSATVMAIFDGVHGNPNIKDSPMADLQCEACHGPLGNHNKGGKEPMITFGQNS
EEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCEEHHHCCCCCCCCCCCCCCEEEECCCC
PVPAQKQNSVCMSCHNDDQRIAWKGNHHDNADIPCSSCHQVHVAKDPISDKANEVAICTQ
CCCCCCCCCEEEEECCCCCEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEHH
CHTQQKADMHKRSSHPLQWQQMVCSDCHNPHGSLNDASLKQMSVNENCYSCHAEKRGPKL
HHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCHHHHCCHHCCCCC
WEHAPVTDNCANCHNPHGSVNESMLISKPPQLCQQCHASDGHSSNAYFGNQTNAFTSGNS
CCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHCCCCCCCCCEECCCCCCEECCCC
CMNCHGQVHGSNHPSGKLLQR
EEECCEEECCCCCCCCCCCCC
>Mature Secondary Structure
MNMDIGLKFKSITQVMLAVMLSILSLSTLATPWDDKPPEEVVATLDKKFAEGKYSAKGAD
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC
TCLMCHKKSATVMAIFDGVHGNPNIKDSPMADLQCEACHGPLGNHNKGGKEPMITFGQNS
EEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCEEHHHCCCCCCCCCCCCCCEEEECCCC
PVPAQKQNSVCMSCHNDDQRIAWKGNHHDNADIPCSSCHQVHVAKDPISDKANEVAICTQ
CCCCCCCCCEEEEECCCCCEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEHH
CHTQQKADMHKRSSHPLQWQQMVCSDCHNPHGSLNDASLKQMSVNENCYSCHAEKRGPKL
HHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCHHHHCCHHCCCCC
WEHAPVTDNCANCHNPHGSVNESMLISKPPQLCQQCHASDGHSSNAYFGNQTNAFTSGNS
CCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHCCCCCCCCCEECCCCCCEECCCC
CMNCHGQVHGSNHPSGKLLQR
EEECCEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: reduced cytochrome C552; nitrite [C]

Specific reaction: reduced cytochrome C552 + nitrite = oxidized cytochrome C552 + NH3 [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA