| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117921073
Identifier: 117921073
GI number: 117921073
Start: 3141721
End: 3142389
Strand: Direct
Name: 117921073
Synonym: Shewana3_2632
Alternate gene names: NA
Gene position: 3141721-3142389 (Clockwise)
Preceding gene: 117921072
Following gene: 117921074
Centisome position: 63.19
GC content: 45.29
Gene sequence:
>669_bases ATGGTTTTGAACACTTCGCAGCTAATCAGCACGTTGAAAAATCAGCTAACAACCCTTGAGCAAGAAGTGCTGCAACACGA CAGTCACCTTGCGCCGAGTCAGCGCAAACTCCTGCAGGATATTGAGCGCTTTAATCAGTCGCTGTTTATTCAAAATGGCG CTCAGCTGATCCCCTGCATTGAACAAATACGTAATAGTATCGGTCAGTTAGAGAAACAGATCGCCCTAAAACTCGCGCCG CAAACCATCGCCTTAAGCTGTGAGCGTATTCAAGACCGCTTTACCGCGGTTAAACGGGCGCTACTGACGACCTCAATCGA TATAAAGTCTAAAAATCAACAACGTGCCAGTAAGCGCGCGCGTTTTGCCCAGCAACAGGCACAGTCGCACCAAGCCAGCG GGTTTGCTTGGATTGCCAGCAATGTGTTACAAAATAGCCACGAAATCTATGCCGAATTAAACAAGCATCTGAATTGGGCG AAGAAATTTGAACAAAAAATTGCAGAAATGGAGTCAAAACTTGAAAACTGTCATAGTGCTGACAAAATCCGTTTGCAAAA TGACATCCTTTTGATGCATCGTCGTTTGGGTAAATGCAGGCAAGCCATCAGTTATATTGAAGATCGCATTCAAGCATTCG AACGTCCGCATCAGAGCCATAATCGTTAA
Upstream 100 bases:
>100_bases TTATCGGCGCCCGCTGCGCGATAAAATTTGGTATGCCTTTTATTCGGCCTTTGTTTATATTAATTGTCCTGTCAATTGCC GCTAATCTGGCGTGGAGCGC
Downstream 100 bases:
>100_bases GGAGCAACAATGAAATCACTTTTGCCAATCAGCAGCCTGCTAGTGCTACTCGGCTCTGCCTCAGCCTTTGCCGCAGATCT GAATATCCCTATGTCCTTCG
Product: primosomal replication protein N''
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 222; Mature: 222
Protein sequence:
>222_residues MVLNTSQLISTLKNQLTTLEQEVLQHDSHLAPSQRKLLQDIERFNQSLFIQNGAQLIPCIEQIRNSIGQLEKQIALKLAP QTIALSCERIQDRFTAVKRALLTTSIDIKSKNQQRASKRARFAQQQAQSHQASGFAWIASNVLQNSHEIYAELNKHLNWA KKFEQKIAEMESKLENCHSADKIRLQNDILLMHRRLGKCRQAISYIEDRIQAFERPHQSHNR
Sequences:
>Translated_222_residues MVLNTSQLISTLKNQLTTLEQEVLQHDSHLAPSQRKLLQDIERFNQSLFIQNGAQLIPCIEQIRNSIGQLEKQIALKLAP QTIALSCERIQDRFTAVKRALLTTSIDIKSKNQQRASKRARFAQQQAQSHQASGFAWIASNVLQNSHEIYAELNKHLNWA KKFEQKIAEMESKLENCHSADKIRLQNDILLMHRRLGKCRQAISYIEDRIQAFERPHQSHNR >Mature_222_residues MVLNTSQLISTLKNQLTTLEQEVLQHDSHLAPSQRKLLQDIERFNQSLFIQNGAQLIPCIEQIRNSIGQLEKQIALKLAP QTIALSCERIQDRFTAVKRALLTTSIDIKSKNQQRASKRARFAQQQAQSHQASGFAWIASNVLQNSHEIYAELNKHLNWA KKFEQKIAEMESKLENCHSADKIRLQNDILLMHRRLGKCRQAISYIEDRIQAFERPHQSHNR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25669; Mature: 25669
Theoretical pI: Translated: 10.32; Mature: 10.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLNTSQLISTLKNQLTTLEQEVLQHDSHLAPSQRKLLQDIERFNQSLFIQNGAQLIPCI CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHH EQIRNSIGQLEKQIALKLAPQTIALSCERIQDRFTAVKRALLTTSIDIKSKNQQRASKRA HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH RFAQQQAQSHQASGFAWIASNVLQNSHEIYAELNKHLNWAKKFEQKIAEMESKLENCHSA HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH DKIRLQNDILLMHRRLGKCRQAISYIEDRIQAFERPHQSHNR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MVLNTSQLISTLKNQLTTLEQEVLQHDSHLAPSQRKLLQDIERFNQSLFIQNGAQLIPCI CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHH EQIRNSIGQLEKQIALKLAPQTIALSCERIQDRFTAVKRALLTTSIDIKSKNQQRASKRA HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH RFAQQQAQSHQASGFAWIASNVLQNSHEIYAELNKHLNWAKKFEQKIAEMESKLENCHSA HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH DKIRLQNDILLMHRRLGKCRQAISYIEDRIQAFERPHQSHNR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA