Definition Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence.
Accession NC_008577
Length 4,972,204

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The map label for this gene is 117921073

Identifier: 117921073

GI number: 117921073

Start: 3141721

End: 3142389

Strand: Direct

Name: 117921073

Synonym: Shewana3_2632

Alternate gene names: NA

Gene position: 3141721-3142389 (Clockwise)

Preceding gene: 117921072

Following gene: 117921074

Centisome position: 63.19

GC content: 45.29

Gene sequence:

>669_bases
ATGGTTTTGAACACTTCGCAGCTAATCAGCACGTTGAAAAATCAGCTAACAACCCTTGAGCAAGAAGTGCTGCAACACGA
CAGTCACCTTGCGCCGAGTCAGCGCAAACTCCTGCAGGATATTGAGCGCTTTAATCAGTCGCTGTTTATTCAAAATGGCG
CTCAGCTGATCCCCTGCATTGAACAAATACGTAATAGTATCGGTCAGTTAGAGAAACAGATCGCCCTAAAACTCGCGCCG
CAAACCATCGCCTTAAGCTGTGAGCGTATTCAAGACCGCTTTACCGCGGTTAAACGGGCGCTACTGACGACCTCAATCGA
TATAAAGTCTAAAAATCAACAACGTGCCAGTAAGCGCGCGCGTTTTGCCCAGCAACAGGCACAGTCGCACCAAGCCAGCG
GGTTTGCTTGGATTGCCAGCAATGTGTTACAAAATAGCCACGAAATCTATGCCGAATTAAACAAGCATCTGAATTGGGCG
AAGAAATTTGAACAAAAAATTGCAGAAATGGAGTCAAAACTTGAAAACTGTCATAGTGCTGACAAAATCCGTTTGCAAAA
TGACATCCTTTTGATGCATCGTCGTTTGGGTAAATGCAGGCAAGCCATCAGTTATATTGAAGATCGCATTCAAGCATTCG
AACGTCCGCATCAGAGCCATAATCGTTAA

Upstream 100 bases:

>100_bases
TTATCGGCGCCCGCTGCGCGATAAAATTTGGTATGCCTTTTATTCGGCCTTTGTTTATATTAATTGTCCTGTCAATTGCC
GCTAATCTGGCGTGGAGCGC

Downstream 100 bases:

>100_bases
GGAGCAACAATGAAATCACTTTTGCCAATCAGCAGCCTGCTAGTGCTACTCGGCTCTGCCTCAGCCTTTGCCGCAGATCT
GAATATCCCTATGTCCTTCG

Product: primosomal replication protein N''

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MVLNTSQLISTLKNQLTTLEQEVLQHDSHLAPSQRKLLQDIERFNQSLFIQNGAQLIPCIEQIRNSIGQLEKQIALKLAP
QTIALSCERIQDRFTAVKRALLTTSIDIKSKNQQRASKRARFAQQQAQSHQASGFAWIASNVLQNSHEIYAELNKHLNWA
KKFEQKIAEMESKLENCHSADKIRLQNDILLMHRRLGKCRQAISYIEDRIQAFERPHQSHNR

Sequences:

>Translated_222_residues
MVLNTSQLISTLKNQLTTLEQEVLQHDSHLAPSQRKLLQDIERFNQSLFIQNGAQLIPCIEQIRNSIGQLEKQIALKLAP
QTIALSCERIQDRFTAVKRALLTTSIDIKSKNQQRASKRARFAQQQAQSHQASGFAWIASNVLQNSHEIYAELNKHLNWA
KKFEQKIAEMESKLENCHSADKIRLQNDILLMHRRLGKCRQAISYIEDRIQAFERPHQSHNR
>Mature_222_residues
MVLNTSQLISTLKNQLTTLEQEVLQHDSHLAPSQRKLLQDIERFNQSLFIQNGAQLIPCIEQIRNSIGQLEKQIALKLAP
QTIALSCERIQDRFTAVKRALLTTSIDIKSKNQQRASKRARFAQQQAQSHQASGFAWIASNVLQNSHEIYAELNKHLNWA
KKFEQKIAEMESKLENCHSADKIRLQNDILLMHRRLGKCRQAISYIEDRIQAFERPHQSHNR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25669; Mature: 25669

Theoretical pI: Translated: 10.32; Mature: 10.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLNTSQLISTLKNQLTTLEQEVLQHDSHLAPSQRKLLQDIERFNQSLFIQNGAQLIPCI
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
EQIRNSIGQLEKQIALKLAPQTIALSCERIQDRFTAVKRALLTTSIDIKSKNQQRASKRA
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
RFAQQQAQSHQASGFAWIASNVLQNSHEIYAELNKHLNWAKKFEQKIAEMESKLENCHSA
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
DKIRLQNDILLMHRRLGKCRQAISYIEDRIQAFERPHQSHNR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MVLNTSQLISTLKNQLTTLEQEVLQHDSHLAPSQRKLLQDIERFNQSLFIQNGAQLIPCI
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
EQIRNSIGQLEKQIALKLAPQTIALSCERIQDRFTAVKRALLTTSIDIKSKNQQRASKRA
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
RFAQQQAQSHQASGFAWIASNVLQNSHEIYAELNKHLNWAKKFEQKIAEMESKLENCHSA
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
DKIRLQNDILLMHRRLGKCRQAISYIEDRIQAFERPHQSHNR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA