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The map label for this gene is yccT [C]

Identifier: 117921074

GI number: 117921074

Start: 3142399

End: 3143091

Strand: Direct

Name: yccT [C]

Synonym: Shewana3_2633

Alternate gene names: 117921074

Gene position: 3142399-3143091 (Clockwise)

Preceding gene: 117921073

Following gene: 117921075

Centisome position: 63.2

GC content: 50.22

Gene sequence:

>693_bases
ATGAAATCACTTTTGCCAATCAGCAGCCTGCTAGTGCTACTCGGCTCTGCCTCAGCCTTTGCCGCAGATCTGAATATCCC
TATGTCCTTCGAATACCTTGCCCTCGATGGCAAAAAAGTCGAGTCCAGTGTATTCAACCATAAAAGCAGCTTAGAGTTGG
CGCCCGGCACTCACAAAATCGCGATCCGTTACCATGAGATGGTTGAAGACGATTTCAGTGACAGCCAGACCTTCGTTAAG
TCATCGCCTTTTATCGTGACCTTAGAAGTGGACGGCGATCATCAATATTATTTGCAAGCCGCAGAGGGCAAGGTCGTTAA
AAAGCCTAAAACCTTCGCTCAAAACCCACAAGTGGTGTTAACCCGTGCTGATAAAGGTCAGGTGAATTACCAAGTGACAA
ACACCGATATTGAAGAAGAGAGCTTTGTCTCCCGTCTCTTTAGCGGTAATCAAGCGGTAGATGTGTCAGGTACTGCCGCC
GCAGCAACGGGCGCAGCAGGCACAGCGGCGGTTGTTGCCGCGCCAGCACCCACTTCGGCGCAGGCAGCCGTTAACGCCAC
CTCATTAACCGCTCCAGTTGATACATCTAAAGCAGCGGGGGCGAATCCACAGCAAATGCTGCAATACTGGTGGTTACAGG
CCGATGAGAAAACACGTAAAGAATTTATGAGCTGGGCGATTTCTCAGCTCTAA

Upstream 100 bases:

>100_bases
TCGTCGTTTGGGTAAATGCAGGCAAGCCATCAGTTATATTGAAGATCGCATTCAAGCATTCGAACGTCCGCATCAGAGCC
ATAATCGTTAAGGAGCAACA

Downstream 100 bases:

>100_bases
TCAAGATGATCCCATTGGTTCATCACGCCAGCTATTCCAAGCTGGCGTTACCCTCCCACCACCGCTTTCCCACGACCAAA
TACGCGCGTCTTTACCAATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MKSLLPISSLLVLLGSASAFAADLNIPMSFEYLALDGKKVESSVFNHKSSLELAPGTHKIAIRYHEMVEDDFSDSQTFVK
SSPFIVTLEVDGDHQYYLQAAEGKVVKKPKTFAQNPQVVLTRADKGQVNYQVTNTDIEEESFVSRLFSGNQAVDVSGTAA
AATGAAGTAAVVAAPAPTSAQAAVNATSLTAPVDTSKAAGANPQQMLQYWWLQADEKTRKEFMSWAISQL

Sequences:

>Translated_230_residues
MKSLLPISSLLVLLGSASAFAADLNIPMSFEYLALDGKKVESSVFNHKSSLELAPGTHKIAIRYHEMVEDDFSDSQTFVK
SSPFIVTLEVDGDHQYYLQAAEGKVVKKPKTFAQNPQVVLTRADKGQVNYQVTNTDIEEESFVSRLFSGNQAVDVSGTAA
AATGAAGTAAVVAAPAPTSAQAAVNATSLTAPVDTSKAAGANPQQMLQYWWLQADEKTRKEFMSWAISQL
>Mature_230_residues
MKSLLPISSLLVLLGSASAFAADLNIPMSFEYLALDGKKVESSVFNHKSSLELAPGTHKIAIRYHEMVEDDFSDSQTFVK
SSPFIVTLEVDGDHQYYLQAAEGKVVKKPKTFAQNPQVVLTRADKGQVNYQVTNTDIEEESFVSRLFSGNQAVDVSGTAA
AATGAAGTAAVVAAPAPTSAQAAVNATSLTAPVDTSKAAGANPQQMLQYWWLQADEKTRKEFMSWAISQL

Specific function: Unknown

COG id: COG3110

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0319 family [H]

Homologues:

Organism=Escherichia coli, GI1787198, Length=227, Percent_Identity=22.9074889867841, Blast_Score=60, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018635 [H]

Pfam domain/function: PF09829 DUF2057 [H]

EC number: NA

Molecular weight: Translated: 24677; Mature: 24677

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSLLPISSLLVLLGSASAFAADLNIPMSFEYLALDGKKVESSVFNHKSSLELAPGTHKI
CCCCCCHHHHHHHHCCCCCEEEECCCCCEEEEEEECCCHHHHHHHCCCCCEEECCCCEEE
AIRYHEMVEDDFSDSQTFVKSSPFIVTLEVDGDHQYYLQAAEGKVVKKPKTFAQNPQVVL
EEEEHHHHCCCCCCCHHEEECCCEEEEEEECCCCEEEEEECCCCEEECCHHHCCCCCEEE
TRADKGQVNYQVTNTDIEEESFVSRLFSGNQAVDVSGTAAAATGAAGTAAVVAAPAPTSA
EECCCCEEEEEEECCCCCHHHHHHHHHCCCCEEECCCCCHHCCCCCCCEEEEECCCCCCC
QAAVNATSLTAPVDTSKAAGANPQQMLQYWWLQADEKTRKEFMSWAISQL
HHEECCCEEECCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKSLLPISSLLVLLGSASAFAADLNIPMSFEYLALDGKKVESSVFNHKSSLELAPGTHKI
CCCCCCHHHHHHHHCCCCCEEEECCCCCEEEEEEECCCHHHHHHHCCCCCEEECCCCEEE
AIRYHEMVEDDFSDSQTFVKSSPFIVTLEVDGDHQYYLQAAEGKVVKKPKTFAQNPQVVL
EEEEHHHHCCCCCCCHHEEECCCEEEEEEECCCCEEEEEECCCCEEECCHHHCCCCCEEE
TRADKGQVNYQVTNTDIEEESFVSRLFSGNQAVDVSGTAAAATGAAGTAAVVAAPAPTSA
EECCCCEEEEEEECCCCCHHHHHHHHHCCCCEEECCCCCHHCCCCCCCEEEEECCCCCCC
QAAVNATSLTAPVDTSKAAGANPQQMLQYWWLQADEKTRKEFMSWAISQL
HHEECCCEEECCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12368813 [H]