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The map label for this gene is yfcA [C]

Identifier: 117921072

GI number: 117921072

Start: 3140957

End: 3141730

Strand: Direct

Name: yfcA [C]

Synonym: Shewana3_2631

Alternate gene names: 117921072

Gene position: 3140957-3141730 (Clockwise)

Preceding gene: 117921071

Following gene: 117921073

Centisome position: 63.17

GC content: 50.13

Gene sequence:

>774_bases
TTGGAGTTGTTACTCGAGCCCAGTAATTGGGCCCTGTTGGCTGTCATTGGCTTAATTGCAGGTTTTATCGATGCAGTGGT
CGGTGGTGGAGGCCTGCTCTCTATTCCAGCCCTGCTCACCCTCGGGATCCCACCGCATACCGCCTTAGGTACCAATAAAT
TTGCCGCCAGTTTTGGCTCCTCCATGGCAGCTTGGACCTATTATCGCCAGCATCTGCTCAAACCCAGTTTTTGGTATATG
GCGTTTATCGCCACCTTTATTGGCGCGGTACTTGGCAGTGTGTTTGTGTACTTATTAAATGCCCAGTGGCTTGAAAAAGC
CTTACCACTGCTCATTATTGGCATCGCGATATACAGCTTGCTGAGCCCAAATGCCATCTCGGATACCGATTGCCAGGCAC
CGACAAAAGCCCAATCTAAACTCAAACAAAGTCTGCAAGGGCTCTTGCTGGGTGCTTATGATGGTTTTGCAGGCCCAGGC
ATTGGCGCCTTTTGGACTGTGAGTTCCGGTGCTTTATACAAATTACCGCTGTTGCATAGCTGCGCGCTTGCCAAAGCCAT
GACCTTTACCAGTAACTTGACGGCGCTGGCGATCTTTGGCTTTCTTGGGCAAGTCCATTGGCAAATCGGCCTGTGGATGG
GGTTATCTATGATGCTCGGCTCCTTTATCGGCGCCCGCTGCGCGATAAAATTTGGTATGCCTTTTATTCGGCCTTTGTTT
ATATTAATTGTCCTGTCAATTGCCGCTAATCTGGCGTGGAGCGCATGGTTTTGA

Upstream 100 bases:

>100_bases
AGTCACGATCCTAGATAGACGATTAGTGACCAAACGTTACGGCAAATCCTTGCTAGACGCTCTGCCCCCCTTTAGACGAG
TCATTGAGTAGGATTAAGAT

Downstream 100 bases:

>100_bases
ACACTTCGCAGCTAATCAGCACGTTGAAAAATCAGCTAACAACCCTTGAGCAAGAAGTGCTGCAACACGACAGTCACCTT
GCGCCGAGTCAGCGCAAACT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MELLLEPSNWALLAVIGLIAGFIDAVVGGGGLLSIPALLTLGIPPHTALGTNKFAASFGSSMAAWTYYRQHLLKPSFWYM
AFIATFIGAVLGSVFVYLLNAQWLEKALPLLIIGIAIYSLLSPNAISDTDCQAPTKAQSKLKQSLQGLLLGAYDGFAGPG
IGAFWTVSSGALYKLPLLHSCALAKAMTFTSNLTALAIFGFLGQVHWQIGLWMGLSMMLGSFIGARCAIKFGMPFIRPLF
ILIVLSIAANLAWSAWF

Sequences:

>Translated_257_residues
MELLLEPSNWALLAVIGLIAGFIDAVVGGGGLLSIPALLTLGIPPHTALGTNKFAASFGSSMAAWTYYRQHLLKPSFWYM
AFIATFIGAVLGSVFVYLLNAQWLEKALPLLIIGIAIYSLLSPNAISDTDCQAPTKAQSKLKQSLQGLLLGAYDGFAGPG
IGAFWTVSSGALYKLPLLHSCALAKAMTFTSNLTALAIFGFLGQVHWQIGLWMGLSMMLGSFIGARCAIKFGMPFIRPLF
ILIVLSIAANLAWSAWF
>Mature_257_residues
MELLLEPSNWALLAVIGLIAGFIDAVVGGGGLLSIPALLTLGIPPHTALGTNKFAASFGSSMAAWTYYRQHLLKPSFWYM
AFIATFIGAVLGSVFVYLLNAQWLEKALPLLIIGIAIYSLLSPNAISDTDCQAPTKAQSKLKQSLQGLLLGAYDGFAGPG
IGAFWTVSSGALYKLPLLHSCALAKAMTFTSNLTALAIFGFLGQVHWQIGLWMGLSMMLGSFIGARCAIKFGMPFIRPLF
ILIVLSIAANLAWSAWF

Specific function: Unknown

COG id: COG0730

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0721 family [H]

Homologues:

Organism=Escherichia coli, GI1788667, Length=253, Percent_Identity=33.596837944664, Blast_Score=124, Evalue=7e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002781 [H]

Pfam domain/function: PF01925 DUF81 [H]

EC number: NA

Molecular weight: Translated: 27479; Mature: 27479

Theoretical pI: Translated: 9.39; Mature: 9.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELLLEPSNWALLAVIGLIAGFIDAVVGGGGLLSIPALLTLGIPPHTALGTNKFAASFGS
CCEEECCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHCC
SMAAWTYYRQHLLKPSFWYMAFIATFIGAVLGSVFVYLLNAQWLEKALPLLIIGIAIYSL
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSPNAISDTDCQAPTKAQSKLKQSLQGLLLGAYDGFAGPGIGAFWTVSSGALYKLPLLHS
HCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCEEEHHHHHH
CALAKAMTFTSNLTALAIFGFLGQVHWQIGLWMGLSMMLGSFIGARCAIKFGMPFIRPLF
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
ILIVLSIAANLAWSAWF
HHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MELLLEPSNWALLAVIGLIAGFIDAVVGGGGLLSIPALLTLGIPPHTALGTNKFAASFGS
CCEEECCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHCC
SMAAWTYYRQHLLKPSFWYMAFIATFIGAVLGSVFVYLLNAQWLEKALPLLIIGIAIYSL
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSPNAISDTDCQAPTKAQSKLKQSLQGLLLGAYDGFAGPGIGAFWTVSSGALYKLPLLHS
HCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCEEEHHHHHH
CALAKAMTFTSNLTALAIFGFLGQVHWQIGLWMGLSMMLGSFIGARCAIKFGMPFIRPLF
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
ILIVLSIAANLAWSAWF
HHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]