Definition Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence.
Accession NC_008577
Length 4,972,204

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The map label for this gene is 117921060

Identifier: 117921060

GI number: 117921060

Start: 3123759

End: 3125594

Strand: Reverse

Name: 117921060

Synonym: Shewana3_2619

Alternate gene names: NA

Gene position: 3125594-3123759 (Counterclockwise)

Preceding gene: 117921062

Following gene: 117921059

Centisome position: 62.86

GC content: 47.44

Gene sequence:

>1836_bases
ATGAAATTAAGTTTATTAGCGGGAACGATAGCGTTAGTGTTTGCTTTACAAGGCTGCTCAAAGCCTGAGACAACGGCTGC
GGTACAGGAAGGTTCGGCTCCATCAGCACCCGCCCAAGCTCAAACTGAAACTCAAACCGCAGAGTCTAAATACGCAGCCT
TAGTTGATGCCTATTTTAAAGATTACTTAAAGTTAGAGCCGATTTACGCCACTTTTGTCGGTGTTAATGATTACAACGCG
CAGTTTGGTGGAGACTTAACCGAGGAATATCTTAAGGCGCGTCATGATCTTAATACCCGTTATTTAGCGCAAGTGAGAGC
GATTGACCTTGAGCAATTGCCAGCCGATTTACAACTCAGCTATGCGCTGTTTGTTTATGACCGCGAAATGGCTCTAGTGG
ACGAAACCTTCCCATCACGCTTTATGCCGATCAGCCAATTCTACAGCACAGTGATCACTATGGTGCAACTGGGGAGCGGT
GAGAGTGCGCAGCCCTTTAACACAGTACAGGATTATCGCAACTGGGAGCAGCGTGTTAACGGCTTTATCGATTGGATCCA
ATTGGCCGAGAATCGCATGAATGAAGGTATTGCCAGTAAAGTGGTGTTACCGCGCGTGTTAGTTGAGCGGATTATTCCAC
AGCTTGATGCCATGCTTACTACGGATGCTAGCCAAAGCATTTTCTATTCACCGATTAATCACTTCCCAGAAGCGTTTTCG
GATCAAGATAAGGCTGAGTTAACAGCAAGTTATCAGGCGATGATTAATGAGCGTTTAGTGCCTGCATTAACGGGGCTGCG
CGATTACTTCAAGCAGACTTACTTACCTAAGTCCCGCGCGACGGACGGTTGGTCTGGTCTACCAAACGGTAAAGCTTGGT
ATCAGCATTTAGCCAATTCCCATACCACCACGACCATGCCGGTGGATGAAATTCATCAAATCGGTCTGAATGAGGTCGCG
CGCATTCTTTCTGAGATGGACAAAGTCCGTGAGCAAGTGGGTTTTAAAGGGGATTTAAAAGCCTTTTTCGCCTCCTTATC
GTCTGAACCACAATACTTCTATAACGATCGCCAAGGCCTAATCGATGGCTACATGGTGTTAAAAGATAAGATTAACCAAG
TATTGCCACAGTATTTTAATGTGATGCCAAAGGCCGACTATGTGGTTAAACCGGTTGAAAGCTTTAGAGAACAATCGGCA
GCGGGCGCATCCTATGAATCGCCGGCTGTGGATGGTAGTCGTCCAGGGGTGTTTTATATCAACACCTATAACCTAAAAGC
TCAGCCGAAATGGGGCATGACGACGTTATCATTACATGAGGCCGCGCCTGGGCACCATTTCCAAATCGCCATTAAGCAAG
AGCTAACAGGCGTGCCTGAGTTCCAACGTTTCAGTGGCTATACAGCCTTCGAAGAGGGCTGGGCGTTGTATGCTGAATAC
TTAGGCATCGAAATGGGGCTCTTTAGCGACCCTTATCAATACTTTGGTAAGCTGTCAGACGAAATGCTGCGTGCGATGCG
TTTGGTGGTGGATACGGGATTACATGCCAAAGGCTGGAGCCGCGAGCAAGCGATTCAATATATGAAGGACAATTCGCCCA
TGGCCGAGTCGGATATTATTGCTGAAGTTGAACGTTATATGGCGATTCCGGGTCAAGCGCTCTCCTATAAAGTAGGTCAG
CTAAAAATCCTAGCCCTACGTGAACGTGCTGAAAAAGCCCTAGGTGATAAGTTTGACCTAAAAGCCTTCCATGATCAGAT
CCTCACCTCTGGCTCACTACCTATGGCGGTGATGGAGCAGAAGATCGACCGCTGGATTGCGGCGACTAAGGCTTAA

Upstream 100 bases:

>100_bases
TTACGAAATGAGTAGATCATAGATGAATCCCGTAAGCAGACTTTGAACTAAGTATAGGAAGAGTTTGGCTATCACGGACC
CAAAAGGAGAAATATAAAAG

Downstream 100 bases:

>100_bases
TACCGAGTCAATTATGCTGCGCCGTTATCGATTACAAAATTAATGACGGCGCAGTTTAAGACTTTTTAATTAAACAGAAT
GTTTTTATACTCAACATTCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 611; Mature: 611

Protein sequence:

>611_residues
MKLSLLAGTIALVFALQGCSKPETTAAVQEGSAPSAPAQAQTETQTAESKYAALVDAYFKDYLKLEPIYATFVGVNDYNA
QFGGDLTEEYLKARHDLNTRYLAQVRAIDLEQLPADLQLSYALFVYDREMALVDETFPSRFMPISQFYSTVITMVQLGSG
ESAQPFNTVQDYRNWEQRVNGFIDWIQLAENRMNEGIASKVVLPRVLVERIIPQLDAMLTTDASQSIFYSPINHFPEAFS
DQDKAELTASYQAMINERLVPALTGLRDYFKQTYLPKSRATDGWSGLPNGKAWYQHLANSHTTTTMPVDEIHQIGLNEVA
RILSEMDKVREQVGFKGDLKAFFASLSSEPQYFYNDRQGLIDGYMVLKDKINQVLPQYFNVMPKADYVVKPVESFREQSA
AGASYESPAVDGSRPGVFYINTYNLKAQPKWGMTTLSLHEAAPGHHFQIAIKQELTGVPEFQRFSGYTAFEEGWALYAEY
LGIEMGLFSDPYQYFGKLSDEMLRAMRLVVDTGLHAKGWSREQAIQYMKDNSPMAESDIIAEVERYMAIPGQALSYKVGQ
LKILALRERAEKALGDKFDLKAFHDQILTSGSLPMAVMEQKIDRWIAATKA

Sequences:

>Translated_611_residues
MKLSLLAGTIALVFALQGCSKPETTAAVQEGSAPSAPAQAQTETQTAESKYAALVDAYFKDYLKLEPIYATFVGVNDYNA
QFGGDLTEEYLKARHDLNTRYLAQVRAIDLEQLPADLQLSYALFVYDREMALVDETFPSRFMPISQFYSTVITMVQLGSG
ESAQPFNTVQDYRNWEQRVNGFIDWIQLAENRMNEGIASKVVLPRVLVERIIPQLDAMLTTDASQSIFYSPINHFPEAFS
DQDKAELTASYQAMINERLVPALTGLRDYFKQTYLPKSRATDGWSGLPNGKAWYQHLANSHTTTTMPVDEIHQIGLNEVA
RILSEMDKVREQVGFKGDLKAFFASLSSEPQYFYNDRQGLIDGYMVLKDKINQVLPQYFNVMPKADYVVKPVESFREQSA
AGASYESPAVDGSRPGVFYINTYNLKAQPKWGMTTLSLHEAAPGHHFQIAIKQELTGVPEFQRFSGYTAFEEGWALYAEY
LGIEMGLFSDPYQYFGKLSDEMLRAMRLVVDTGLHAKGWSREQAIQYMKDNSPMAESDIIAEVERYMAIPGQALSYKVGQ
LKILALRERAEKALGDKFDLKAFHDQILTSGSLPMAVMEQKIDRWIAATKA
>Mature_611_residues
MKLSLLAGTIALVFALQGCSKPETTAAVQEGSAPSAPAQAQTETQTAESKYAALVDAYFKDYLKLEPIYATFVGVNDYNA
QFGGDLTEEYLKARHDLNTRYLAQVRAIDLEQLPADLQLSYALFVYDREMALVDETFPSRFMPISQFYSTVITMVQLGSG
ESAQPFNTVQDYRNWEQRVNGFIDWIQLAENRMNEGIASKVVLPRVLVERIIPQLDAMLTTDASQSIFYSPINHFPEAFS
DQDKAELTASYQAMINERLVPALTGLRDYFKQTYLPKSRATDGWSGLPNGKAWYQHLANSHTTTTMPVDEIHQIGLNEVA
RILSEMDKVREQVGFKGDLKAFFASLSSEPQYFYNDRQGLIDGYMVLKDKINQVLPQYFNVMPKADYVVKPVESFREQSA
AGASYESPAVDGSRPGVFYINTYNLKAQPKWGMTTLSLHEAAPGHHFQIAIKQELTGVPEFQRFSGYTAFEEGWALYAEY
LGIEMGLFSDPYQYFGKLSDEMLRAMRLVVDTGLHAKGWSREQAIQYMKDNSPMAESDIIAEVERYMAIPGQALSYKVGQ
LKILALRERAEKALGDKFDLKAFHDQILTSGSLPMAVMEQKIDRWIAATKA

Specific function: Unknown

COG id: COG4805

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 68767; Mature: 68767

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLSLLAGTIALVFALQGCSKPETTAAVQEGSAPSAPAQAQTETQTAESKYAALVDAYFK
CCCHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
DYLKLEPIYATFVGVNDYNAQFGGDLTEEYLKARHDLNTRYLAQVRAIDLEQLPADLQLS
HHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEE
YALFVYDREMALVDETFPSRFMPISQFYSTVITMVQLGSGESAQPFNTVQDYRNWEQRVN
EEEEEEECHHHHHHHHCCHHCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
GFIDWIQLAENRMNEGIASKVVLPRVLVERIIPQLDAMLTTDASQSIFYSPINHFPEAFS
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHC
DQDKAELTASYQAMINERLVPALTGLRDYFKQTYLPKSRATDGWSGLPNGKAWYQHLANS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCC
HTTTTMPVDEIHQIGLNEVARILSEMDKVREQVGFKGDLKAFFASLSSEPQYFYNDRQGL
CCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHCCCCHH
IDGYMVLKDKINQVLPQYFNVMPKADYVVKPVESFREQSAAGASYESPAVDGSRPGVFYI
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE
NTYNLKAQPKWGMTTLSLHEAAPGHHFQIAIKQELTGVPEFQRFSGYTAFEEGWALYAEY
EEEEEEECCCCCCEEEEHHCCCCCCEEEEEEHHHCCCCCCHHHHCCCCHHHHHHHHHHHH
LGIEMGLFSDPYQYFGKLSDEMLRAMRLVVDTGLHAKGWSREQAIQYMKDNSPMAESDII
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCHHHHH
AEVERYMAIPGQALSYKVGQLKILALRERAEKALGDKFDLKAFHDQILTSGSLPMAVMEQ
HHHHHHHCCCCHHHHEECCCEEHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHH
KIDRWIAATKA
HHHHHHHHCCC
>Mature Secondary Structure
MKLSLLAGTIALVFALQGCSKPETTAAVQEGSAPSAPAQAQTETQTAESKYAALVDAYFK
CCCHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
DYLKLEPIYATFVGVNDYNAQFGGDLTEEYLKARHDLNTRYLAQVRAIDLEQLPADLQLS
HHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEE
YALFVYDREMALVDETFPSRFMPISQFYSTVITMVQLGSGESAQPFNTVQDYRNWEQRVN
EEEEEEECHHHHHHHHCCHHCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
GFIDWIQLAENRMNEGIASKVVLPRVLVERIIPQLDAMLTTDASQSIFYSPINHFPEAFS
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHC
DQDKAELTASYQAMINERLVPALTGLRDYFKQTYLPKSRATDGWSGLPNGKAWYQHLANS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCC
HTTTTMPVDEIHQIGLNEVARILSEMDKVREQVGFKGDLKAFFASLSSEPQYFYNDRQGL
CCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHCCCCHH
IDGYMVLKDKINQVLPQYFNVMPKADYVVKPVESFREQSAAGASYESPAVDGSRPGVFYI
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE
NTYNLKAQPKWGMTTLSLHEAAPGHHFQIAIKQELTGVPEFQRFSGYTAFEEGWALYAEY
EEEEEEECCCCCCEEEEHHCCCCCCEEEEEEHHHCCCCCCHHHHCCCCHHHHHHHHHHHH
LGIEMGLFSDPYQYFGKLSDEMLRAMRLVVDTGLHAKGWSREQAIQYMKDNSPMAESDII
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCHHHHH
AEVERYMAIPGQALSYKVGQLKILALRERAEKALGDKFDLKAFHDQILTSGSLPMAVMEQ
HHHHHHHCCCCHHHHEECCCEEHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHH
KIDRWIAATKA
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA