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The map label for this gene is yfbK [C]

Identifier: 117920853

GI number: 117920853

Start: 2888800

End: 2891055

Strand: Reverse

Name: yfbK [C]

Synonym: Shewana3_2410

Alternate gene names: 117920853

Gene position: 2891055-2888800 (Counterclockwise)

Preceding gene: 117920854

Following gene: 117920852

Centisome position: 58.14

GC content: 52.62

Gene sequence:

>2256_bases
ATGATCACAGGGAAAAGGGTAAAAGAAGTTTGTCAAACACTGGCGATGCTAGTGATCGGCGCCTCCATTTGTTGGGGGCT
ACCATTTGCGGTGTTAGCCTCACCGAACAGTGTGGGCACCTTATCGGCGCCACAAAATATTGCCGCGACCTTCGATGAAC
ACACTGCGAGCATATTGCCAGCGTTTAGTTTCGACGATGTCACCCAAGGGATGCTGGTGTATCAAACCGCCAGCGGCCGT
TTAATGCCGTCCTTACCCGTGGACACGCAAGTGTCGATGCAGGTCTCGGGGCTGACCAATAGGGTGAGCGTAAAGCAGGT
TTTCAGTAATCAAACGGGATTTGTCCTCAATGGCCGTTATCTGTTCCCTTTACCCAATGAGGCGGCTGTGGACTCACTGC
GTTTGCACATTGGTGAGCGGATCATCGAAGGCCAAATTCACCCAAAACAGCAAGCAAAACAGATTTTTGAGCAGGCCAAA
TCCGAAGGGAAGCGTGCCAGTCTAGTCAGCCAAGAACGGCCCAATATGTTCACGACCGAAGTCGCTAACCTCGCTCCCGA
TGAGGAGTTGGTGGTCGAAATCAGCTATCAAGAAACCATTCATTATGAAGATGGTCTCTTTAGCCTACGTTTTCCGCTGG
TGGTGGCGCCGCGCTATATCCCTGGCTTAACGCTAGGCGGAAACAATGGTGAGCGCGTGACCAGCAGCCAAGTCTTCGAT
GCCGACCGGATTATTGCCCCGATCCGTGATGCCAATAGCGAGGCGGATCCCGTACTCAAGGCCGATATTAAGGTCAAACT
CGGTGAAGGCGTGGACAAATCCGCCGTGGTGAGTCCGTATCATCCCATTACGATTGATGAAAAACAGGGCCAACTGACGG
TGGCCTTGGCTAATCGCGTGCCTGCCAATCGTGACTTTGTGCTGCAATGGCGTCTTAAGCAGGGCACCAGTCCCGTGGGT
TGGGTATTCAACCAAGCGGGCAAAACCCATGTGTCGCAGGACGATAATGCGAGTGCGGATACAGGTCCAACTGGTAAAAG
TAGCAATACAGATAACTACAGCTTAGTGATGGTCCTGCCGCCCAAAGTCGAGGCCAGTGAACAACTGAACTTGCCCCGAG
AGCTTATTTTAGTGATTGATACTTCGGGGTCGATGGCGGGAGACTCTATCATTCAGGCGAAAAATGCCCTGCGTTATGCG
CTGCGCGGTTTAAGGCCACAGGACAGTTTTAACATTATCGAATTTAACTCTGATGTGTCTTTACTATCGCCAACACCATT
GCCCGCAACCGCGAGTAATCTTGCTATGGCACGTCAGTTTGTGAATCGTTTGCAGGCCGATGGCGGCACCGAAATGGCGC
AGGCTTTAAATGCCGCGCTGCCAAGACAGGCGTTTAACGCAGCGTCGGCTGAGGATAAGTCGCTAAGACAAGTGATCTTT
ATGACTGATGGCTCAGTCGGCAATGAGTCGGCGTTATTTGAGTTAATCCGCAATCAAATCGGCGACAACCGTCTTTTTAC
CGTCGGCATTGGCTCGGCGCCAAACTCGCATTTTATGCAGCGTGCGGCTGAACTTGGGCGCGGTACTTTTACTTACATTG
GTGATGTGGATGAAGTGGAGCAAAAGATCAGCCAGTTGCTAGCCAAAATCCAGTATCCGGTACTGACCGATTTGCAGGTG
CGTTTTGACGATGGTTCTGTGCCTGATTACTGGCCCGCACCTATACCCGATCTTTACCGTGGTGAGCCGGTATTGATCAG
CCTAAAGCGCCATCCTCGTGAGCCTCAGGAACTGGTGATCTCCGGTCGTCAGGGCCATAAAAACTGGCAACAGTCGTTAT
CTTTGCAAGCCAATGTCGCAACTGATGTAGCGCAATCCTCAGCGGGACTCGATTTACTCTGGGCGCGCAAACAGATTGCG
GCCTTAGAGCTGAGTAAAAACGGCGCTAACGATGACAAGGTCAAACAACAGGTCACGGCGCTGTCGCTCAACTATCACTT
AGTCAGCCCTTATACCAGCTTGGTCGCGGTGGATTTAACCCCTATCGCCAGCAATGCCATGAGCCGCGATGCGGTGGTGC
GCCAGCATTTACCCTTGGGTTGGCAGCCAATGGGCGTTTTGCCACAAACATCGACCTCGAGCCGTTTCGACATGCTCTTA
GGGGGCAGCGTGTTACTGCTTGCCTTGATGTTGGCACTGTCGATTCGTCGCCAGCAGCGGCAGCAACGCGCGCTGTCATT
CGCGCTGAACGGCTGA

Upstream 100 bases:

>100_bases
CACTCTGACTATGCAGCCTAACCAAGGACTGATGGCGAGCCGCGTGACCGAATAATTCAACAATATCAATCGTATTCAAT
CAAGATCAGGAGCCTTTGTG

Downstream 100 bases:

>100_bases
GTCATGTCCATGAGTAGGCGCATGACTCAACAGATACAAATAGGATTGCTGGTGGGATTGGTATTACTCGGCATCACGTT
GTTTGGAAAAGGATTCTATA

Product: vault protein inter-alpha-trypsin subunit

Products: NA

Alternate protein names: Von Willebrand Factor Type A; Von Willebrand Factor Type A Domain-Containing Protein; Vault Protein Inter-Alpha-Trypsin; Inter-Alpha-Trypsin Inhibitor Domain-Containing Protein; Vault Protein Inter-Alpha-Trypsin Domain Protein; Cell Wall Anchor Domain-Containing Protein; Vault Protein Inter-Alpha-Trypsin Domain-Containing Protein; Von Willebrand Factor Type A Domain Protein; LPXTG-Motif Cell Wall Anchor Domain-Containing Protein; Transmembrane Protein; LPXTG-Motif Cell Wall Anchor Domain Protein; Vault Protein Inter-Alpha-Trypsin Domain; Protein ContAining A Von Willebrand Factor Type A Domain; Inter-Alpha-Trypsin Inhibitor Domain Protein; Von Willebrand Factor

Number of amino acids: Translated: 751; Mature: 751

Protein sequence:

>751_residues
MITGKRVKEVCQTLAMLVIGASICWGLPFAVLASPNSVGTLSAPQNIAATFDEHTASILPAFSFDDVTQGMLVYQTASGR
LMPSLPVDTQVSMQVSGLTNRVSVKQVFSNQTGFVLNGRYLFPLPNEAAVDSLRLHIGERIIEGQIHPKQQAKQIFEQAK
SEGKRASLVSQERPNMFTTEVANLAPDEELVVEISYQETIHYEDGLFSLRFPLVVAPRYIPGLTLGGNNGERVTSSQVFD
ADRIIAPIRDANSEADPVLKADIKVKLGEGVDKSAVVSPYHPITIDEKQGQLTVALANRVPANRDFVLQWRLKQGTSPVG
WVFNQAGKTHVSQDDNASADTGPTGKSSNTDNYSLVMVLPPKVEASEQLNLPRELILVIDTSGSMAGDSIIQAKNALRYA
LRGLRPQDSFNIIEFNSDVSLLSPTPLPATASNLAMARQFVNRLQADGGTEMAQALNAALPRQAFNAASAEDKSLRQVIF
MTDGSVGNESALFELIRNQIGDNRLFTVGIGSAPNSHFMQRAAELGRGTFTYIGDVDEVEQKISQLLAKIQYPVLTDLQV
RFDDGSVPDYWPAPIPDLYRGEPVLISLKRHPREPQELVISGRQGHKNWQQSLSLQANVATDVAQSSAGLDLLWARKQIA
ALELSKNGANDDKVKQQVTALSLNYHLVSPYTSLVAVDLTPIASNAMSRDAVVRQHLPLGWQPMGVLPQTSTSSRFDMLL
GGSVLLLALMLALSIRRQQRQQRALSFALNG

Sequences:

>Translated_751_residues
MITGKRVKEVCQTLAMLVIGASICWGLPFAVLASPNSVGTLSAPQNIAATFDEHTASILPAFSFDDVTQGMLVYQTASGR
LMPSLPVDTQVSMQVSGLTNRVSVKQVFSNQTGFVLNGRYLFPLPNEAAVDSLRLHIGERIIEGQIHPKQQAKQIFEQAK
SEGKRASLVSQERPNMFTTEVANLAPDEELVVEISYQETIHYEDGLFSLRFPLVVAPRYIPGLTLGGNNGERVTSSQVFD
ADRIIAPIRDANSEADPVLKADIKVKLGEGVDKSAVVSPYHPITIDEKQGQLTVALANRVPANRDFVLQWRLKQGTSPVG
WVFNQAGKTHVSQDDNASADTGPTGKSSNTDNYSLVMVLPPKVEASEQLNLPRELILVIDTSGSMAGDSIIQAKNALRYA
LRGLRPQDSFNIIEFNSDVSLLSPTPLPATASNLAMARQFVNRLQADGGTEMAQALNAALPRQAFNAASAEDKSLRQVIF
MTDGSVGNESALFELIRNQIGDNRLFTVGIGSAPNSHFMQRAAELGRGTFTYIGDVDEVEQKISQLLAKIQYPVLTDLQV
RFDDGSVPDYWPAPIPDLYRGEPVLISLKRHPREPQELVISGRQGHKNWQQSLSLQANVATDVAQSSAGLDLLWARKQIA
ALELSKNGANDDKVKQQVTALSLNYHLVSPYTSLVAVDLTPIASNAMSRDAVVRQHLPLGWQPMGVLPQTSTSSRFDMLL
GGSVLLLALMLALSIRRQQRQQRALSFALNG
>Mature_751_residues
MITGKRVKEVCQTLAMLVIGASICWGLPFAVLASPNSVGTLSAPQNIAATFDEHTASILPAFSFDDVTQGMLVYQTASGR
LMPSLPVDTQVSMQVSGLTNRVSVKQVFSNQTGFVLNGRYLFPLPNEAAVDSLRLHIGERIIEGQIHPKQQAKQIFEQAK
SEGKRASLVSQERPNMFTTEVANLAPDEELVVEISYQETIHYEDGLFSLRFPLVVAPRYIPGLTLGGNNGERVTSSQVFD
ADRIIAPIRDANSEADPVLKADIKVKLGEGVDKSAVVSPYHPITIDEKQGQLTVALANRVPANRDFVLQWRLKQGTSPVG
WVFNQAGKTHVSQDDNASADTGPTGKSSNTDNYSLVMVLPPKVEASEQLNLPRELILVIDTSGSMAGDSIIQAKNALRYA
LRGLRPQDSFNIIEFNSDVSLLSPTPLPATASNLAMARQFVNRLQADGGTEMAQALNAALPRQAFNAASAEDKSLRQVIF
MTDGSVGNESALFELIRNQIGDNRLFTVGIGSAPNSHFMQRAAELGRGTFTYIGDVDEVEQKISQLLAKIQYPVLTDLQV
RFDDGSVPDYWPAPIPDLYRGEPVLISLKRHPREPQELVISGRQGHKNWQQSLSLQANVATDVAQSSAGLDLLWARKQIA
ALELSKNGANDDKVKQQVTALSLNYHLVSPYTSLVAVDLTPIASNAMSRDAVVRQHLPLGWQPMGVLPQTSTSSRFDMLL
GGSVLLLALMLALSIRRQQRQQRALSFALNG

Specific function: Unknown

COG id: COG2304

COG function: function code R; Uncharacterized protein containing a von Willebrand factor type A (vWA) domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI112789550, Length=640, Percent_Identity=22.65625, Blast_Score=119, Evalue=1e-26,
Organism=Homo sapiens, GI262050538, Length=357, Percent_Identity=26.3305322128852, Blast_Score=106, Evalue=1e-22,
Organism=Homo sapiens, GI31542984, Length=357, Percent_Identity=26.3305322128852, Blast_Score=105, Evalue=1e-22,
Organism=Homo sapiens, GI70778918, Length=323, Percent_Identity=25.077399380805, Blast_Score=103, Evalue=7e-22,
Organism=Homo sapiens, GI38348336, Length=590, Percent_Identity=24.0677966101695, Blast_Score=100, Evalue=3e-21,
Organism=Homo sapiens, GI153945711, Length=333, Percent_Identity=22.5225225225225, Blast_Score=96, Evalue=9e-20,
Organism=Homo sapiens, GI153945780, Length=333, Percent_Identity=22.5225225225225, Blast_Score=96, Evalue=1e-19,
Organism=Homo sapiens, GI49355778, Length=335, Percent_Identity=22.6865671641791, Blast_Score=96, Evalue=1e-19,
Organism=Homo sapiens, GI133925809, Length=328, Percent_Identity=27.4390243902439, Blast_Score=96, Evalue=2e-19,
Organism=Homo sapiens, GI210147462, Length=190, Percent_Identity=31.5789473684211, Blast_Score=92, Evalue=2e-18,
Organism=Homo sapiens, GI156119625, Length=333, Percent_Identity=23.7237237237237, Blast_Score=71, Evalue=3e-12,
Organism=Homo sapiens, GI261878614, Length=333, Percent_Identity=23.7237237237237, Blast_Score=71, Evalue=3e-12,
Organism=Homo sapiens, GI261878618, Length=332, Percent_Identity=23.4939759036145, Blast_Score=69, Evalue=2e-11,
Organism=Homo sapiens, GI261878616, Length=332, Percent_Identity=23.4939759036145, Blast_Score=69, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 81805; Mature: 81805

Theoretical pI: Translated: 6.31; Mature: 6.31

Prosite motif: PS50847 GRAM_POS_ANCHORING ; PS50234 VWFA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITGKRVKEVCQTLAMLVIGASICWGLPFAVLASPNSVGTLSAPQNIAATFDEHTASILP
CCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEECCCCCHHHHHHHHHHHHHCC
AFSFDDVTQGMLVYQTASGRLMPSLPVDTQVSMQVSGLTNRVSVKQVFSNQTGFVLNGRY
CCCCCHHHCCEEEEEECCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHCCCCCEEEECEE
LFPLPNEAAVDSLRLHIGERIIEGQIHPKQQAKQIFEQAKSEGKRASLVSQERPNMFTTE
EECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHCCCCCEEHHH
VANLAPDEELVVEISYQETIHYEDGLFSLRFPLVVAPRYIPGLTLGGNNGERVTSSQVFD
HHHCCCCCEEEEEEEHHHEEEECCCEEEEECCEEECCCCCCCEEECCCCCCEECCCHHCC
ADRIIAPIRDANSEADPVLKADIKVKLGEGVDKSAVVSPYHPITIDEKQGQLTVALANRV
CHHHEECHHCCCCCCCCEEEEEEEEEECCCCCCCCEECCCCCEEEECCCCEEEEEEECCC
PANRDFVLQWRLKQGTSPVGWVFNQAGKTHVSQDDNASADTGPTGKSSNTDNYSLVMVLP
CCCCCEEEEEEECCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEC
PKVEASEQLNLPRELILVIDTSGSMAGDSIIQAKNALRYALRGLRPQDSFNIIEFNSDVS
CCCCCHHHHCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCC
LLSPTPLPATASNLAMARQFVNRLQADGGTEMAQALNAALPRQAFNAASAEDKSLRQVIF
EECCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHCCCCCCCCCEEEEEE
MTDGSVGNESALFELIRNQIGDNRLFTVGIGSAPNSHFMQRAAELGRGTFTYIGDVDEVE
EECCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHCCCEEEEECCHHHHH
QKISQLLAKIQYPVLTDLQVRFDDGSVPDYWPAPIPDLYRGEPVLISLKRHPREPQELVI
HHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCHHHCCCEEEEEECCCCCCCHHHEE
SGRQGHKNWQQSLSLQANVATDVAQSSAGLDLLWARKQIAALELSKNGANDDKVKQQVTA
ECCCCCCCHHHHCCEEEHHHHHHHHCCCCCEEEEHHHHHHEEEECCCCCCHHHHHHHHHE
LSLNYHLVSPYTSLVAVDLTPIASNAMSRDAVVRQHLPLGWQPMGVLPQTSTSSRFDMLL
EEEEEEEECCCCEEEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHC
GGSVLLLALMLALSIRRQQRQQRALSFALNG
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MITGKRVKEVCQTLAMLVIGASICWGLPFAVLASPNSVGTLSAPQNIAATFDEHTASILP
CCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEECCCCCHHHHHHHHHHHHHCC
AFSFDDVTQGMLVYQTASGRLMPSLPVDTQVSMQVSGLTNRVSVKQVFSNQTGFVLNGRY
CCCCCHHHCCEEEEEECCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHCCCCCEEEECEE
LFPLPNEAAVDSLRLHIGERIIEGQIHPKQQAKQIFEQAKSEGKRASLVSQERPNMFTTE
EECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHCCCCCEEHHH
VANLAPDEELVVEISYQETIHYEDGLFSLRFPLVVAPRYIPGLTLGGNNGERVTSSQVFD
HHHCCCCCEEEEEEEHHHEEEECCCEEEEECCEEECCCCCCCEEECCCCCCEECCCHHCC
ADRIIAPIRDANSEADPVLKADIKVKLGEGVDKSAVVSPYHPITIDEKQGQLTVALANRV
CHHHEECHHCCCCCCCCEEEEEEEEEECCCCCCCCEECCCCCEEEECCCCEEEEEEECCC
PANRDFVLQWRLKQGTSPVGWVFNQAGKTHVSQDDNASADTGPTGKSSNTDNYSLVMVLP
CCCCCEEEEEEECCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEC
PKVEASEQLNLPRELILVIDTSGSMAGDSIIQAKNALRYALRGLRPQDSFNIIEFNSDVS
CCCCCHHHHCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCC
LLSPTPLPATASNLAMARQFVNRLQADGGTEMAQALNAALPRQAFNAASAEDKSLRQVIF
EECCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHCCCCCCCCCEEEEEE
MTDGSVGNESALFELIRNQIGDNRLFTVGIGSAPNSHFMQRAAELGRGTFTYIGDVDEVE
EECCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHCCCEEEEECCHHHHH
QKISQLLAKIQYPVLTDLQVRFDDGSVPDYWPAPIPDLYRGEPVLISLKRHPREPQELVI
HHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCHHHCCCEEEEEECCCCCCCHHHEE
SGRQGHKNWQQSLSLQANVATDVAQSSAGLDLLWARKQIAALELSKNGANDDKVKQQVTA
ECCCCCCCHHHHCCEEEHHHHHHHHCCCCCEEEEHHHHHHEEEECCCCCCHHHHHHHHHE
LSLNYHLVSPYTSLVAVDLTPIASNAMSRDAVVRQHLPLGWQPMGVLPQTSTSSRFDMLL
EEEEEEEECCCCEEEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHC
GGSVLLLALMLALSIRRQQRQQRALSFALNG
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA