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The map label for this gene is yiaD [C]

Identifier: 117920854

GI number: 117920854

Start: 2891101

End: 2891895

Strand: Reverse

Name: yiaD [C]

Synonym: Shewana3_2411

Alternate gene names: 117920854

Gene position: 2891895-2891101 (Counterclockwise)

Preceding gene: 117920858

Following gene: 117920853

Centisome position: 58.16

GC content: 54.21

Gene sequence:

>795_bases
ATGATGAAAAAGACGCTGATTAATATCTTGGTACTGAGTGTATTCGCCGCGCCCATCGCTAGCGTATCGGCAAGGGTTTC
CTTGCAAAATCAACCCGTGCTCTCAGAGCCACAGACTGAGATGCTTGAGCAAGATGAGGATGATGGTGAAGCGCTGATAG
GTCTTGGCGGCGGAGCGTTACTTGGCGCCCTAGTGGGCGGGCCTGTTGGCGCCATTATCGGTGGATTTACCGGCACCTTA
ATTGGCCAATCGGTCTCCGATACCGACACGGTTAAAACCCAGCAACAGCATATTGCCTTGCAGCGCCAACAACTGGCGAG
CATATCGGCCAAACAACAGGCCAGCGAGCAACGCGCTGCCGAATACGCCTCAACCCAAAAGCAACTCGATGAACTGCTCG
CCGAGCAACAACAACTGTTAAGTGAGTTGGCGCTGGGCATGAATGTGCAGTTCCGTACAGGCTCGTCGGAGCTTGAAAGC
CATTTTTTGCCCCAATTAGACAATGTCGCCAAGGTGATGAAGCGCTCGAGCGAGTCCAATCTCGAGCTGAAAGGTTATGC
CGACCGTCGCGGTGATCTGGCCTACAACCAAGCGCTCTCGGAGCAACGTTTGTTAGAAGTGCGGGGCTACTTGATTAAGC
AAGGCGTAGCCCCCGAGCGGATCACCACCCAAGCCTTCGGCGCCAGAATGCCGCTCAATGATCAGCAAGATAGTGAATCC
GATGTGTTCGATCGCCGAGTCACTCTGACTATGCAGCCTAACCAAGGACTGATGGCGAGCCGCGTGACCGAATAA

Upstream 100 bases:

>100_bases
CGCTTATGCCATGGCGCTTGTGTTTAATAAGCTCATTCCGTTTTACCCGCCGCGCTAATGACTTAGGCGGGTAAGCGCAG
CACAAATCAAAAGGAATGAG

Downstream 100 bases:

>100_bases
TTCAACAATATCAATCGTATTCAATCAAGATCAGGAGCCTTTGTGATGATCACAGGGAAAAGGGTAAAAGAAGTTTGTCA
AACACTGGCGATGCTAGTGA

Product: OmpA/MotB domain-containing protein

Products: NA

Alternate protein names: OmpA/MotB Domain Protein; OmpA Family Protein; Outer Membrane Protein; OmpA/MotB; Rickettsia; OmpA Protein; Ompa/Motb Domain Protein; Outer Membrane Protein OprF; Outer Membrane Lipoprotein; OmpA-Family Protein; Inner Membrane Lipoprotein YiaD; OmpA Domain-Containing Protein; OmpA Family Outer Membrane Protein; Lipoprotein

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MMKKTLINILVLSVFAAPIASVSARVSLQNQPVLSEPQTEMLEQDEDDGEALIGLGGGALLGALVGGPVGAIIGGFTGTL
IGQSVSDTDTVKTQQQHIALQRQQLASISAKQQASEQRAAEYASTQKQLDELLAEQQQLLSELALGMNVQFRTGSSELES
HFLPQLDNVAKVMKRSSESNLELKGYADRRGDLAYNQALSEQRLLEVRGYLIKQGVAPERITTQAFGARMPLNDQQDSES
DVFDRRVTLTMQPNQGLMASRVTE

Sequences:

>Translated_264_residues
MMKKTLINILVLSVFAAPIASVSARVSLQNQPVLSEPQTEMLEQDEDDGEALIGLGGGALLGALVGGPVGAIIGGFTGTL
IGQSVSDTDTVKTQQQHIALQRQQLASISAKQQASEQRAAEYASTQKQLDELLAEQQQLLSELALGMNVQFRTGSSELES
HFLPQLDNVAKVMKRSSESNLELKGYADRRGDLAYNQALSEQRLLEVRGYLIKQGVAPERITTQAFGARMPLNDQQDSES
DVFDRRVTLTMQPNQGLMASRVTE
>Mature_264_residues
MMKKTLINILVLSVFAAPIASVSARVSLQNQPVLSEPQTEMLEQDEDDGEALIGLGGGALLGALVGGPVGAIIGGFTGTL
IGQSVSDTDTVKTQQQHIALQRQQLASISAKQQASEQRAAEYASTQKQLDELLAEQQQLLSELALGMNVQFRTGSSELES
HFLPQLDNVAKVMKRSSESNLELKGYADRRGDLAYNQALSEQRLLEVRGYLIKQGVAPERITTQAFGARMPLNDQQDSES
DVFDRRVTLTMQPNQGLMASRVTE

Specific function: Unknown

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Attached To The Membrane By A Lipid Anchor [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28657; Mature: 28657

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKKTLINILVLSVFAAPIASVSARVSLQNQPVLSEPQTEMLEQDEDDGEALIGLGGGAL
CCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHCCCCCCCEEEECCHHHH
LGALVGGPVGAIIGGFTGTLIGQSVSDTDTVKTQQQHIALQRQQLASISAKQQASEQRAA
HHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EYASTQKQLDELLAEQQQLLSELALGMNVQFRTGSSELESHFLPQLDNVAKVMKRSSESN
HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHCCCHHHHHHHHHCCCCCC
LELKGYADRRGDLAYNQALSEQRLLEVRGYLIKQGVAPERITTQAFGARMPLNDQQDSES
EEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCH
DVFDRRVTLTMQPNQGLMASRVTE
HHHHCEEEEEECCCCCCHHHCCCC
>Mature Secondary Structure
MMKKTLINILVLSVFAAPIASVSARVSLQNQPVLSEPQTEMLEQDEDDGEALIGLGGGAL
CCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHCCCCCCCEEEECCHHHH
LGALVGGPVGAIIGGFTGTLIGQSVSDTDTVKTQQQHIALQRQQLASISAKQQASEQRAA
HHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EYASTQKQLDELLAEQQQLLSELALGMNVQFRTGSSELESHFLPQLDNVAKVMKRSSESN
HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHCCCHHHHHHHHHCCCCCC
LELKGYADRRGDLAYNQALSEQRLLEVRGYLIKQGVAPERITTQAFGARMPLNDQQDSES
EEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCH
DVFDRRVTLTMQPNQGLMASRVTE
HHHHCEEEEEECCCCCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA