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The map label for this gene is 117920852

Identifier: 117920852

GI number: 117920852

Start: 2888107

End: 2888700

Strand: Reverse

Name: 117920852

Synonym: Shewana3_2409

Alternate gene names: NA

Gene position: 2888700-2888107 (Counterclockwise)

Preceding gene: 117920853

Following gene: 117920850

Centisome position: 58.1

GC content: 53.2

Gene sequence:

>594_bases
ATGCAAGCGAAAGCACACTTTGCCCAATATTTGATTGAACAAGCCTGGGCTAAAACCTTAATCGATGGTCAATCCCATAA
GCCTTGGTCCTGGGCCGATACCTATCCCGTGGCTAAGCTCTCCATCGAGCAGGCCAAAAGACCGAATCACTTCGATGGTC
CGGCATCCAACGACAGCTTATATGTGCTGGCGGGCGCATCAGGTCGTAATTTGGCCTTCGGGCCAGCCTTAGTGTTATCG
AGTGCCCCCGCTGGCGCGCAAGGTAATACTGTGATTGCAGGGCACAGGGATACGCATTTTGCGATGTTAAATGGCATCAG
TGTTGGACGCCGCTTGGCGCTGCAAACCGCGACGGGCAAAGAAATTGTTTACCAAGTAGTCGCGACCGAAGTGGTGCACG
AATCGCAAACTGAGTTGATGGCGCCAAGTGAGGATAATCGTTTAACCTTGATCACTTGCTATCCCTTCGATGCGTTGCAA
GGTGGGGCGGAACTGCGTTTTGTGGTGCAGGCTTTTCCGATCGAACCCGAGCCTGCTGCGGTACAATCCGCTGAAACGAT
GGCCACACAGGCGATGGTTCAAAAGGTGGCCTAG

Upstream 100 bases:

>100_bases
AGTCATGTCCATGAGTAGGCGCATGACTCAACAGATACAAATAGGATTGCTGGTGGGATTGGTATTACTCGGCATCACGT
TGTTTGGAAAAGGATTCTAT

Downstream 100 bases:

>100_bases
CGGTAACGCTTTTATCCTAAAACTTATTTAAAAACGTTGAGTTAACAGCTTTGTGTAAATTCTAACGTGAAGATAAGCAT
GTAAATAAGTCGGTGAGATA

Product: sortase family protein

Products: NA

Alternate protein names: Peptidase; Sortase; Sortase-Like Protein; LPXTG-Site Transpeptidase Family Protein; Sortase Family Protein Peptidase C; Transpeptidase Protein; Sortase Family; Sortase-Like

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MQAKAHFAQYLIEQAWAKTLIDGQSHKPWSWADTYPVAKLSIEQAKRPNHFDGPASNDSLYVLAGASGRNLAFGPALVLS
SAPAGAQGNTVIAGHRDTHFAMLNGISVGRRLALQTATGKEIVYQVVATEVVHESQTELMAPSEDNRLTLITCYPFDALQ
GGAELRFVVQAFPIEPEPAAVQSAETMATQAMVQKVA

Sequences:

>Translated_197_residues
MQAKAHFAQYLIEQAWAKTLIDGQSHKPWSWADTYPVAKLSIEQAKRPNHFDGPASNDSLYVLAGASGRNLAFGPALVLS
SAPAGAQGNTVIAGHRDTHFAMLNGISVGRRLALQTATGKEIVYQVVATEVVHESQTELMAPSEDNRLTLITCYPFDALQ
GGAELRFVVQAFPIEPEPAAVQSAETMATQAMVQKVA
>Mature_197_residues
MQAKAHFAQYLIEQAWAKTLIDGQSHKPWSWADTYPVAKLSIEQAKRPNHFDGPASNDSLYVLAGASGRNLAFGPALVLS
SAPAGAQGNTVIAGHRDTHFAMLNGISVGRRLALQTATGKEIVYQVVATEVVHESQTELMAPSEDNRLTLITCYPFDALQ
GGAELRFVVQAFPIEPEPAAVQSAETMATQAMVQKVA

Specific function: Unknown

COG id: COG3764

COG function: function code M; Sortase (surface protein transpeptidase)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21174; Mature: 21174

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQAKAHFAQYLIEQAWAKTLIDGQSHKPWSWADTYPVAKLSIEQAKRPNHFDGPASNDSL
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEHHHHCCCCCCCCCCCCCCE
YVLAGASGRNLAFGPALVLSSAPAGAQGNTVIAGHRDTHFAMLNGISVGRRLALQTATGK
EEEECCCCCCCCCCHHHEEECCCCCCCCCEEEECCCCCEEEEECCCCCCCEEEEECCCCH
EIVYQVVATEVVHESQTELMAPSEDNRLTLITCYPFDALQGGAELRFVVQAFPIEPEPAA
HHHHHHHHHHHHHHCHHHHCCCCCCCCEEEEEECCHHHHCCCCEEEEEEEECCCCCCCHH
VQSAETMATQAMVQKVA
HHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQAKAHFAQYLIEQAWAKTLIDGQSHKPWSWADTYPVAKLSIEQAKRPNHFDGPASNDSL
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEHHHHCCCCCCCCCCCCCCE
YVLAGASGRNLAFGPALVLSSAPAGAQGNTVIAGHRDTHFAMLNGISVGRRLALQTATGK
EEEECCCCCCCCCCHHHEEECCCCCCCCCEEEECCCCCEEEEECCCCCCCEEEEECCCCH
EIVYQVVATEVVHESQTELMAPSEDNRLTLITCYPFDALQGGAELRFVVQAFPIEPEPAA
HHHHHHHHHHHHHHCHHHHCCCCCCCCEEEEEECCHHHHCCCCEEEEEEEECCCCCCCHH
VQSAETMATQAMVQKVA
HHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA