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The map label for this gene is yeiE [H]

Identifier: 117920810

GI number: 117920810

Start: 2845323

End: 2846222

Strand: Reverse

Name: yeiE [H]

Synonym: Shewana3_2367

Alternate gene names: 117920810

Gene position: 2846222-2845323 (Counterclockwise)

Preceding gene: 117920811

Following gene: 117920808

Centisome position: 57.24

GC content: 50.89

Gene sequence:

>900_bases
ATGCGAATAACCTTAAGGCAACTTGCGGTATTTGAAGCCGTTGCACGCAGTGGGCAAGTGGCAAAAGCGGCAGAGCAAGT
TAATCTATCGCCGCCTGCGACCTCCATGGCCTTGGCCGAATTAGAAAAACAGCTCAATGCCCGTTTATTTGAGCGGATTG
GCAATCGATTACAGCTCAACTCCCAAGGGAATTTGTTGTTGCCACTGGCGACGGACTTGTTACATCGAGTCGAGCAAATC
GAGCAAGCGTTCACGCGCCAAGACGGTGATTTAGTCGGGCATTTAAGCGTGAGTGCTAGTTCCACTATTGGTAACTATTT
GTTAGCAAAAGCGGCGGTGGCCTTTTGTCAGCAACATACGCAGACCCATGTGGATGTGGCCATTACCAATACCCAAGAAG
TGATCCAATCGGTCGCGCAATTTCGCGCCGAAATGGGGTTTATCGAAGGACATTGCACCGATAATCGCTTGAATATTGAG
CCTTGGCATAAGGACAGGCTACTCGTCTTTTGTCATCCCGCGCATCCCCTTGCGGGGCAGACGGTTAAACCCGCGGCGGT
CAAAGGCCAATCCTGGGTATTAAGGGAGGAAGGCTCGGGCACGCGTGAATATTTTGTCAATGCAGCCAATGAATTAGGCA
TGCAGCCTGAGGCGAAATTCTGCTTTACCACGCCCGATGCCATTAAGCTTGCAGTAAAACAAGGCGCTGGACTGGGCGTG
CTCTCGGAGTTGGCGCTGGATAAAGACATCAGCCGAAAAGAGCTGGCACTGGTAACCATTGAAGGCCTAGTGCTAGAGCG
ACAGTTTTATCGGATTACCCACAAGAGCCGCCAAGCCACGTCATTAGGCCTAGCCTTTGTGCAGTTTTGCGGTAATTTTT
TCCATTTATCTCGGGAGTGA

Upstream 100 bases:

>100_bases
GTAAAGTATTACAGCCGAATTGGACCACAGCCCCGAGCGCGGGTCGAACCGGGCATTTATCCGAACATACCAAATAATTT
CATTCATTAATGAGTCTGTT

Downstream 100 bases:

>100_bases
TCGGCGCAACGTTTAGCGCCGAAATGAGGGCCAGTTTTAGGACTCAGGCTGATAGCCTTCATCGACTTGGGTAGGGCTCG
CTTCAGCGGCGGCGCGGGCG

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 299; Mature: 299

Protein sequence:

>299_residues
MRITLRQLAVFEAVARSGQVAKAAEQVNLSPPATSMALAELEKQLNARLFERIGNRLQLNSQGNLLLPLATDLLHRVEQI
EQAFTRQDGDLVGHLSVSASSTIGNYLLAKAAVAFCQQHTQTHVDVAITNTQEVIQSVAQFRAEMGFIEGHCTDNRLNIE
PWHKDRLLVFCHPAHPLAGQTVKPAAVKGQSWVLREEGSGTREYFVNAANELGMQPEAKFCFTTPDAIKLAVKQGAGLGV
LSELALDKDISRKELALVTIEGLVLERQFYRITHKSRQATSLGLAFVQFCGNFFHLSRE

Sequences:

>Translated_299_residues
MRITLRQLAVFEAVARSGQVAKAAEQVNLSPPATSMALAELEKQLNARLFERIGNRLQLNSQGNLLLPLATDLLHRVEQI
EQAFTRQDGDLVGHLSVSASSTIGNYLLAKAAVAFCQQHTQTHVDVAITNTQEVIQSVAQFRAEMGFIEGHCTDNRLNIE
PWHKDRLLVFCHPAHPLAGQTVKPAAVKGQSWVLREEGSGTREYFVNAANELGMQPEAKFCFTTPDAIKLAVKQGAGLGV
LSELALDKDISRKELALVTIEGLVLERQFYRITHKSRQATSLGLAFVQFCGNFFHLSRE
>Mature_299_residues
MRITLRQLAVFEAVARSGQVAKAAEQVNLSPPATSMALAELEKQLNARLFERIGNRLQLNSQGNLLLPLATDLLHRVEQI
EQAFTRQDGDLVGHLSVSASSTIGNYLLAKAAVAFCQQHTQTHVDVAITNTQEVIQSVAQFRAEMGFIEGHCTDNRLNIE
PWHKDRLLVFCHPAHPLAGQTVKPAAVKGQSWVLREEGSGTREYFVNAANELGMQPEAKFCFTTPDAIKLAVKQGAGLGV
LSELALDKDISRKELALVTIEGLVLERQFYRITHKSRQATSLGLAFVQFCGNFFHLSRE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788481, Length=290, Percent_Identity=37.2413793103448, Blast_Score=186, Evalue=2e-48,
Organism=Escherichia coli, GI87081904, Length=207, Percent_Identity=30.9178743961353, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI1787601, Length=299, Percent_Identity=22.0735785953177, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1787530, Length=250, Percent_Identity=24.4, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1788748, Length=303, Percent_Identity=25.4125412541254, Blast_Score=71, Evalue=8e-14,
Organism=Escherichia coli, GI145693105, Length=205, Percent_Identity=24.390243902439, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1790399, Length=252, Percent_Identity=22.2222222222222, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI87082132, Length=253, Percent_Identity=20.5533596837945, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1786401, Length=295, Percent_Identity=21.6949152542373, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 32997; Mature: 32997

Theoretical pI: Translated: 7.63; Mature: 7.63

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRITLRQLAVFEAVARSGQVAKAAEQVNLSPPATSMALAELEKQLNARLFERIGNRLQLN
CEEHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEC
SQGNLLLPLATDLLHRVEQIEQAFTRQDGDLVGHLSVSASSTIGNYLLAKAAVAFCQQHT
CCCCEEEHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHC
QTHVDVAITNTQEVIQSVAQFRAEMGFIEGHCTDNRLNIEPWHKDRLLVFCHPAHPLAGQ
CCEEEEEECCHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCC
TVKPAAVKGQSWVLREEGSGTREYFVNAANELGMQPEAKFCFTTPDAIKLAVKQGAGLGV
CCCCCEECCCEEEEECCCCCHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHCCCCCHH
LSELALDKDISRKELALVTIEGLVLERQFYRITHKSRQATSLGLAFVQFCGNFFHLSRE
HHHHHHCCCCCCHHEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MRITLRQLAVFEAVARSGQVAKAAEQVNLSPPATSMALAELEKQLNARLFERIGNRLQLN
CEEHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEC
SQGNLLLPLATDLLHRVEQIEQAFTRQDGDLVGHLSVSASSTIGNYLLAKAAVAFCQQHT
CCCCEEEHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHC
QTHVDVAITNTQEVIQSVAQFRAEMGFIEGHCTDNRLNIEPWHKDRLLVFCHPAHPLAGQ
CCEEEEEECCHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCC
TVKPAAVKGQSWVLREEGSGTREYFVNAANELGMQPEAKFCFTTPDAIKLAVKQGAGLGV
CCCCCEECCCEEEEECCCCCHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHCCCCCHH
LSELALDKDISRKELALVTIEGLVLERQFYRITHKSRQATSLGLAFVQFCGNFFHLSRE
HHHHHHCCCCCCHHEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]