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The map label for this gene is 117920648

Identifier: 117920648

GI number: 117920648

Start: 2646442

End: 2647620

Strand: Reverse

Name: 117920648

Synonym: Shewana3_2205

Alternate gene names: NA

Gene position: 2647620-2646442 (Counterclockwise)

Preceding gene: 117920649

Following gene: 117920647

Centisome position: 53.25

GC content: 51.23

Gene sequence:

>1179_bases
ATGCGCGCGCTCGCCACTTGGCAGGATAAATGTATCGATAGCCAATTGCTGGTGGCGAGCATCGTTGGGCTTTTTAAACA
GCGTGGGCTCGATAGTGATAAGTTGTTACGGGGCACGGGGATTTTTGCTGCAGACATTCGTAAACCCGATCACCTTATTA
GTCCAAAGCAGTTATCTCGGCTGCTGGACAATGCTTTATGCCTGTGGCCAAGTGGCGATTTAAGTTTCTTATTGGGTCAG
CTGTGGCTGCCATCCCAAAGTGGCGCGCTCACGGCGGGGATATTTTGCGCACGGGATCTGCAGTCGCTCGGGCATTTTTG
GCACAAATATCATTGGCTCACACAACCTTGGTTGCAAACTTGGCGCTGGCAAGGAGAGCAGGAATGGCACTTTCTATTAA
GCCTCGACTTAGGTATGCAGCGGCACAAACAGTTTTTCATCGAATTAAGCCTGTCGTCCCTCACGGCATGCTGCAAACAA
TTACTTGGCCAAGCTTGGCGCGGCAGTATCAGTTTTCCTTACCCCGCACCAGCGAACTTAGCCCATTACTATAAGTATTT
CGGCACTGAGTTAAGCTTTGATGCGCCCCTTTGCCGAATTTCGATGGGAAAATCCCTGTTGTGCCAACCTCTGTTGTTTG
CAAGTCACTCAGAGACCGATGCGATCGATTTTGCTGGCTCCAAATATACAAAGCCGCCGAATAAGCCCGCTGCGTTGCAA
CCTTGGGATCACCCTCATGCGGGAACGTGGGATCACCCTCAGGCGGGAACGTTGGATCGCCATTTTAACGAGCCGCTTGC
GAGTACTGTGTTAGGGCCGCAACTGACGATGGCCAAGAATGCCCGCCAAGCCCTGCTCGCGCATGGGTTTCGCCATGGAT
TAGCAGCAGGGATCCGCCTTAAATTGATGCACAATGCATTAAGCCTGCCGGAAATTGCGCAATTGTTAGAGATGAGTCCT
GCCACGTTAAAACGGCGTGTTGGGGAGATGGGGCTGAGTTACGGACAATTAGTCGATGAATCCCGTTTGATTAAAGCGTT
GTATTTTCTCGCCGAACCAGATCAGGATGCCAATAGCATTGCGCATTCCTTATCCTTCAGTGACGCCAGTAATTTTAGAC
GTTCCTTCAAGCGCTGGACCGGCCAATTACCCGCCTATTTCCGCTTTTGGCTCGCCTAA

Upstream 100 bases:

>100_bases
ATCAAAAAATGTCACAGCAAAAAGAGAGTCGTAGTCCTGCAGCCACACCGGCTCAAGCGAGTAACACGTTCAATCAGTCT
ACCTTGAGTGAGCTTAACTG

Downstream 100 bases:

>100_bases
GCAAGCGCGATAAGTATTTACGGCTCAAAACAGTAACAATTTCAACTGTTTTTGAATGGATATTCGCGATTTTGCATAAT
GGTTAGAAGAATCCCCGGAG

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator AraC Family; Transcriptional Regulator; Transcriptional Regulator AraC Family Protein; Transcriptional Regulator OruR; Helix-Turn-Helix- Domain Containing Protein AraC Type

Number of amino acids: Translated: 392; Mature: 392

Protein sequence:

>392_residues
MRALATWQDKCIDSQLLVASIVGLFKQRGLDSDKLLRGTGIFAADIRKPDHLISPKQLSRLLDNALCLWPSGDLSFLLGQ
LWLPSQSGALTAGIFCARDLQSLGHFWHKYHWLTQPWLQTWRWQGEQEWHFLLSLDLGMQRHKQFFIELSLSSLTACCKQ
LLGQAWRGSISFPYPAPANLAHYYKYFGTELSFDAPLCRISMGKSLLCQPLLFASHSETDAIDFAGSKYTKPPNKPAALQ
PWDHPHAGTWDHPQAGTLDRHFNEPLASTVLGPQLTMAKNARQALLAHGFRHGLAAGIRLKLMHNALSLPEIAQLLEMSP
ATLKRRVGEMGLSYGQLVDESRLIKALYFLAEPDQDANSIAHSLSFSDASNFRRSFKRWTGQLPAYFRFWLA

Sequences:

>Translated_392_residues
MRALATWQDKCIDSQLLVASIVGLFKQRGLDSDKLLRGTGIFAADIRKPDHLISPKQLSRLLDNALCLWPSGDLSFLLGQ
LWLPSQSGALTAGIFCARDLQSLGHFWHKYHWLTQPWLQTWRWQGEQEWHFLLSLDLGMQRHKQFFIELSLSSLTACCKQ
LLGQAWRGSISFPYPAPANLAHYYKYFGTELSFDAPLCRISMGKSLLCQPLLFASHSETDAIDFAGSKYTKPPNKPAALQ
PWDHPHAGTWDHPQAGTLDRHFNEPLASTVLGPQLTMAKNARQALLAHGFRHGLAAGIRLKLMHNALSLPEIAQLLEMSP
ATLKRRVGEMGLSYGQLVDESRLIKALYFLAEPDQDANSIAHSLSFSDASNFRRSFKRWTGQLPAYFRFWLA
>Mature_392_residues
MRALATWQDKCIDSQLLVASIVGLFKQRGLDSDKLLRGTGIFAADIRKPDHLISPKQLSRLLDNALCLWPSGDLSFLLGQ
LWLPSQSGALTAGIFCARDLQSLGHFWHKYHWLTQPWLQTWRWQGEQEWHFLLSLDLGMQRHKQFFIELSLSSLTACCKQ
LLGQAWRGSISFPYPAPANLAHYYKYFGTELSFDAPLCRISMGKSLLCQPLLFASHSETDAIDFAGSKYTKPPNKPAALQ
PWDHPHAGTWDHPQAGTLDRHFNEPLASTVLGPQLTMAKNARQALLAHGFRHGLAAGIRLKLMHNALSLPEIAQLLEMSP
ATLKRRVGEMGLSYGQLVDESRLIKALYFLAEPDQDANSIAHSLSFSDASNFRRSFKRWTGQLPAYFRFWLA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44194; Mature: 44194

Theoretical pI: Translated: 9.19; Mature: 9.19

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRALATWQDKCIDSQLLVASIVGLFKQRGLDSDKLLRGTGIFAADIRKPDHLISPKQLSR
CCCCCCHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHCCCCEEECCCCCCCCCCHHHHHH
LLDNALCLWPSGDLSFLLGQLWLPSQSGALTAGIFCARDLQSLGHFWHKYHWLTQPWLQT
HHHCCEEECCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
WRWQGEQEWHFLLSLDLGMQRHKQFFIELSLSSLTACCKQLLGQAWRGSISFPYPAPANL
HHCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH
AHYYKYFGTELSFDAPLCRISMGKSLLCQPLLFASHSETDAIDFAGSKYTKPPNKPAALQ
HHHHHHHCCCCCCCCCHHHHHCCHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCCCC
PWDHPHAGTWDHPQAGTLDRHFNEPLASTVLGPQLTMAKNARQALLAHGFRHGLAAGIRL
CCCCCCCCCCCCCCCCCCHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KLMHNALSLPEIAQLLEMSPATLKRRVGEMGLSYGQLVDESRLIKALYFLAEPDQDANSI
HHHHHHCCHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHH
AHSLSFSDASNFRRSFKRWTGQLPAYFRFWLA
HHHHCCHHHHHHHHHHHHHHCCCCHHHHHHCC
>Mature Secondary Structure
MRALATWQDKCIDSQLLVASIVGLFKQRGLDSDKLLRGTGIFAADIRKPDHLISPKQLSR
CCCCCCHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHCCCCEEECCCCCCCCCCHHHHHH
LLDNALCLWPSGDLSFLLGQLWLPSQSGALTAGIFCARDLQSLGHFWHKYHWLTQPWLQT
HHHCCEEECCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
WRWQGEQEWHFLLSLDLGMQRHKQFFIELSLSSLTACCKQLLGQAWRGSISFPYPAPANL
HHCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH
AHYYKYFGTELSFDAPLCRISMGKSLLCQPLLFASHSETDAIDFAGSKYTKPPNKPAALQ
HHHHHHHCCCCCCCCCHHHHHCCHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCCCC
PWDHPHAGTWDHPQAGTLDRHFNEPLASTVLGPQLTMAKNARQALLAHGFRHGLAAGIRL
CCCCCCCCCCCCCCCCCCHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KLMHNALSLPEIAQLLEMSPATLKRRVGEMGLSYGQLVDESRLIKALYFLAEPDQDANSI
HHHHHHCCHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHH
AHSLSFSDASNFRRSFKRWTGQLPAYFRFWLA
HHHHCCHHHHHHHHHHHHHHCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA