Definition Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence.
Accession NC_008577
Length 4,972,204

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The map label for this gene is 117920432

Identifier: 117920432

GI number: 117920432

Start: 2365947

End: 2366279

Strand: Direct

Name: 117920432

Synonym: Shewana3_1987

Alternate gene names: NA

Gene position: 2365947-2366279 (Clockwise)

Preceding gene: 117920429

Following gene: 117920433

Centisome position: 47.58

GC content: 45.05

Gene sequence:

>333_bases
ATGCCTCATATTAGTATGCGCGGCTTGCCACAGGCAGTTGTTGCAGAGCTTAGCCAAACATTACTGCAGTCTTTGGCGGC
TATATGTAAAGGTAATGCAGAGAGTTTTACATTAGATTGGATCCCAAGCATCAGCTACCGTAATGGCAGAATTGATCAAC
GCTTTGTCCAAATCGAATTGCTTTGGTTTCCGGTCGACCCTGATATCCATCTTAAAGTAGAACAAACGATCAGGCTGGCA
GTGACAGAAGCCTATCCAGAATTAACCCAAATTGCTGTGATGTTTTTGTCACTGACCCCAAGCGCTTCCTATCGGGGTGG
TCAGCATGTTTAA

Upstream 100 bases:

>100_bases
CTATCCCACGTGCTTTTCGCCGAAAAGTCTTGCCGAGTTGCAGTGAAGTCGGTAATTTCTACCCCTTACGATTTTAGGAT
CTCAGGTAACCACTAAAACC

Downstream 100 bases:

>100_bases
AGGAGGATGCCTTGCTAGATAAGCTTGGTGGAATAGCCGTTCAACCCGAGGCTTTAACGTGGTTGCTTACGCCATGCCGA
TTTAAGGCAGAATTGCTCAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 110; Mature: 109

Protein sequence:

>110_residues
MPHISMRGLPQAVVAELSQTLLQSLAAICKGNAESFTLDWIPSISYRNGRIDQRFVQIELLWFPVDPDIHLKVEQTIRLA
VTEAYPELTQIAVMFLSLTPSASYRGGQHV

Sequences:

>Translated_110_residues
MPHISMRGLPQAVVAELSQTLLQSLAAICKGNAESFTLDWIPSISYRNGRIDQRFVQIELLWFPVDPDIHLKVEQTIRLA
VTEAYPELTQIAVMFLSLTPSASYRGGQHV
>Mature_109_residues
PHISMRGLPQAVVAELSQTLLQSLAAICKGNAESFTLDWIPSISYRNGRIDQRFVQIELLWFPVDPDIHLKVEQTIRLAV
TEAYPELTQIAVMFLSLTPSASYRGGQHV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12336; Mature: 12205

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPHISMRGLPQAVVAELSQTLLQSLAAICKGNAESFTLDWIPSISYRNGRIDQRFVQIEL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCEEEEEEE
LWFPVDPDIHLKVEQTIRLAVTEAYPELTQIAVMFLSLTPSASYRGGQHV
EEEECCCCEEEEEEHHEEEEHHHHCHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
PHISMRGLPQAVVAELSQTLLQSLAAICKGNAESFTLDWIPSISYRNGRIDQRFVQIEL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCEEEEEEE
LWFPVDPDIHLKVEQTIRLAVTEAYPELTQIAVMFLSLTPSASYRGGQHV
EEEECCCCEEEEEEHHEEEEHHHHCHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA