| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is yaiL [H]
Identifier: 117920428
GI number: 117920428
Start: 2361184
End: 2361726
Strand: Direct
Name: yaiL [H]
Synonym: Shewana3_1983
Alternate gene names: 117920428
Gene position: 2361184-2361726 (Clockwise)
Preceding gene: 117920427
Following gene: 117920429
Centisome position: 47.49
GC content: 46.41
Gene sequence:
>543_bases ATGGCGAATGCATTACAAGAGCAGCTGCTTAAGGCTGGCCTTGCCAGTAAACAAAAAGTACGTGATGTGAAGACGCAAAA ACGTCGCGACAAAAAGGCGCGGGTGGATGATGGTTCGAGCGCATTGAAGAGTGACATTGCCGAGCAAAAACGACTCCAAG CTGAAAAAGATAAGGCTTTGAACGAGCAGCGTTTTGCCGAAGCGACGGCCCGTGGGCAAGTGCGTGGCTTAGTGAGTGAA TTCACTCAATTTGCGATTAAGATCCCAAGCCATGCTGAGGTCAAGTTTAACTATACCCTCGACAATAAAATCTATTCAGT CTATATCGATGAGAAGATCCAATCAGAACTGCTAAAAGGTCTATTAGGGATTGTTCGATACGAAGATAAGAGCTACCTAG TCCCCCATAAATTAGCAGAGCGCGTCAATCTACTGGTGCCACAATGGTGCGGTTACTTGTGGCAACAAGATGAAGGCAAA GCGGTTGAGGTCGAAGATGACCCCTATGCTGATTATGCGATCCCAGACGATTTAATGTGGTAA
Upstream 100 bases:
>100_bases TGACGGCATTAGGCGAGTTGGCGATTAAAGCTCAGCAGTAATAGTGCAATATTTGAACGTTGTAACTTATTTATTTGATA GAGAAATCGGGTGAAAATCC
Downstream 100 bases:
>100_bases TCAATGCGTTAATCGTGAGCTAAGCCGACGACGCATCGCTTATCTCTGGCTACACTAAAACCCTTAAGGCAACTTAAGGG TTTTTTATTGCCCGCATTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 180; Mature: 179
Protein sequence:
>180_residues MANALQEQLLKAGLASKQKVRDVKTQKRRDKKARVDDGSSALKSDIAEQKRLQAEKDKALNEQRFAEATARGQVRGLVSE FTQFAIKIPSHAEVKFNYTLDNKIYSVYIDEKIQSELLKGLLGIVRYEDKSYLVPHKLAERVNLLVPQWCGYLWQQDEGK AVEVEDDPYADYAIPDDLMW
Sequences:
>Translated_180_residues MANALQEQLLKAGLASKQKVRDVKTQKRRDKKARVDDGSSALKSDIAEQKRLQAEKDKALNEQRFAEATARGQVRGLVSE FTQFAIKIPSHAEVKFNYTLDNKIYSVYIDEKIQSELLKGLLGIVRYEDKSYLVPHKLAERVNLLVPQWCGYLWQQDEGK AVEVEDDPYADYAIPDDLMW >Mature_179_residues ANALQEQLLKAGLASKQKVRDVKTQKRRDKKARVDDGSSALKSDIAEQKRLQAEKDKALNEQRFAEATARGQVRGLVSEF TQFAIKIPSHAEVKFNYTLDNKIYSVYIDEKIQSELLKGLLGIVRYEDKSYLVPHKLAERVNLLVPQWCGYLWQQDEGKA VEVEDDPYADYAIPDDLMW
Specific function: Unknown
COG id: COG3122
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87081724, Length=190, Percent_Identity=33.6842105263158, Blast_Score=89, Evalue=2e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018636 [H]
Pfam domain/function: PF09831 DUF2058 [H]
EC number: NA
Molecular weight: Translated: 20632; Mature: 20500
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANALQEQLLKAGLASKQKVRDVKTQKRRDKKARVDDGSSALKSDIAEQKRLQAEKDKAL CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH NEQRFAEATARGQVRGLVSEFTQFAIKIPSHAEVKFNYTLDNKIYSVYIDEKIQSELLKG HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCEEEEEEECHHHHHHHHHH LLGIVRYEDKSYLVPHKLAERVNLLVPQWCGYLWQQDEGKAVEVEDDPYADYAIPDDLMW HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHEECCCCCEEEECCCCCCCCCCCCCCCC >Mature Secondary Structure ANALQEQLLKAGLASKQKVRDVKTQKRRDKKARVDDGSSALKSDIAEQKRLQAEKDKAL CHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH NEQRFAEATARGQVRGLVSEFTQFAIKIPSHAEVKFNYTLDNKIYSVYIDEKIQSELLKG HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCEEEEEEECHHHHHHHHHH LLGIVRYEDKSYLVPHKLAERVNLLVPQWCGYLWQQDEGKAVEVEDDPYADYAIPDDLMW HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHEECCCCCEEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]