Definition Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence.
Accession NC_008577
Length 4,972,204

Click here to switch to the map view.

The map label for this gene is 117920380

Identifier: 117920380

GI number: 117920380

Start: 2300304

End: 2301413

Strand: Direct

Name: 117920380

Synonym: Shewana3_1935

Alternate gene names: NA

Gene position: 2300304-2301413 (Clockwise)

Preceding gene: 117920378

Following gene: 117920381

Centisome position: 46.26

GC content: 47.03

Gene sequence:

>1110_bases
ATGCCTTTTTGTGCAACGTCTTTCAGCGCTACAGCCCAAGGCGCTACAGATTTGAATACTAAGCCTTTTAGCGCTCATGC
AGAGCCTTTGGGGAGCGATATAAGCCTTAATTTGCATGAGGCTAACCAAAAAGATATCGATAGCACATTTCAAACATCTT
CAAAGCTAAGTGGGCGAGAGTGGTCGCAGTATTTCAATCTTAAGCCATTGTTTGGGGTCATTCTGGGCCATGGCTTACTG
CTGTTGTTATTAATTTTTTTATGGCGAACTCAGTCGGAACACTTAGGGCTGTCGTTTACCGAATCATCTTCCAACGCACG
GACTACAACCAAGGCGTTAAAGGCGTATTTTATTTATGCGCCGCCAACGCAAACTGCTCCAGCGGATCCGCCTCAAGATT
ACTCCGTTGAAGAACCTACCGTTTCTAGTGAGCCGATCACTTCGCCGCCTAACACTACGCAGCTGACAGTGGATGTTGAA
CCAGCCGCAAAAGTGATACCAAAACCCACGGAAAAGTTGGCGCCAAAAACTACAGAGCAGATTGCAAAACCTCTTGAAGT
CAGCGCCCAAGCGTCGAATAGAGCAGTTTCAAAGACTCCAACACAGGACCAAACCCAGCAGAGTGCAAAAGAAGCTATTA
AGCCTCAAAAGGCAGAAGTCCAATCAAGCTCGGCTCAAGCGGCAAGTACTCAGCAGTCAGATACTGGTGAGCAAAGCAGC
GGTGCGGCTGGCAGTGTCGGTTTATTTACCCAGCGTTATTTTGAACGCCAGCGTGAGCAAGCCTTAGATGATTTAGTGTT
AGAGCAGGCAAATCATTACAGCAAACGGTCGACTATGTCTGAAATGAGCCCCGAGATGGAGGTGTTGATTGTGCCCAATG
CCGACGATTTTAGCGGCCCCACCAGTTTAGATTTAGAACTGGATCCCAATCGAATTGTCCGTAAAGGGGATACCTGCTAC
CGGGTCGTTAAAGTCGGCACCCAAATTAATCCCTATGCGGAGAATTTAGGGTTCCCCTTCAATTGCAGTGGCAAGAAAAT
GAATCAAGAAATTGATGATGCCATTAAGGCGCAGCTCGATAAAATGATGGTAAAGCGGCCAAAAGATTAA

Upstream 100 bases:

>100_bases
ATGGATTTTGCCTATTCGTTCGAATATTACCCCAGAAGATGATCTTAGTTTTGACGCGTACGGTCGTGTGACAAACGATG
AGACCGCACCATTTTCCGTT

Downstream 100 bases:

>100_bases
AAAATAGTGATGATAAATTTTCACTAAAAATGATATTTATTGTGGATTATAGAGTTTATTAAAATTAAATCTGTTTTATA
CAATAGGTTATTTGTTCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 369; Mature: 368

Protein sequence:

>369_residues
MPFCATSFSATAQGATDLNTKPFSAHAEPLGSDISLNLHEANQKDIDSTFQTSSKLSGREWSQYFNLKPLFGVILGHGLL
LLLLIFLWRTQSEHLGLSFTESSSNARTTTKALKAYFIYAPPTQTAPADPPQDYSVEEPTVSSEPITSPPNTTQLTVDVE
PAAKVIPKPTEKLAPKTTEQIAKPLEVSAQASNRAVSKTPTQDQTQQSAKEAIKPQKAEVQSSSAQAASTQQSDTGEQSS
GAAGSVGLFTQRYFERQREQALDDLVLEQANHYSKRSTMSEMSPEMEVLIVPNADDFSGPTSLDLELDPNRIVRKGDTCY
RVVKVGTQINPYAENLGFPFNCSGKKMNQEIDDAIKAQLDKMMVKRPKD

Sequences:

>Translated_369_residues
MPFCATSFSATAQGATDLNTKPFSAHAEPLGSDISLNLHEANQKDIDSTFQTSSKLSGREWSQYFNLKPLFGVILGHGLL
LLLLIFLWRTQSEHLGLSFTESSSNARTTTKALKAYFIYAPPTQTAPADPPQDYSVEEPTVSSEPITSPPNTTQLTVDVE
PAAKVIPKPTEKLAPKTTEQIAKPLEVSAQASNRAVSKTPTQDQTQQSAKEAIKPQKAEVQSSSAQAASTQQSDTGEQSS
GAAGSVGLFTQRYFERQREQALDDLVLEQANHYSKRSTMSEMSPEMEVLIVPNADDFSGPTSLDLELDPNRIVRKGDTCY
RVVKVGTQINPYAENLGFPFNCSGKKMNQEIDDAIKAQLDKMMVKRPKD
>Mature_368_residues
PFCATSFSATAQGATDLNTKPFSAHAEPLGSDISLNLHEANQKDIDSTFQTSSKLSGREWSQYFNLKPLFGVILGHGLLL
LLLIFLWRTQSEHLGLSFTESSSNARTTTKALKAYFIYAPPTQTAPADPPQDYSVEEPTVSSEPITSPPNTTQLTVDVEP
AAKVIPKPTEKLAPKTTEQIAKPLEVSAQASNRAVSKTPTQDQTQQSAKEAIKPQKAEVQSSSAQAASTQQSDTGEQSSG
AAGSVGLFTQRYFERQREQALDDLVLEQANHYSKRSTMSEMSPEMEVLIVPNADDFSGPTSLDLELDPNRIVRKGDTCYR
VVKVGTQINPYAENLGFPFNCSGKKMNQEIDDAIKAQLDKMMVKRPKD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40349; Mature: 40218

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFCATSFSATAQGATDLNTKPFSAHAEPLGSDISLNLHEANQKDIDSTFQTSSKLSGRE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCHH
WSQYFNLKPLFGVILGHGLLLLLLIFLWRTQSEHLGLSFTESSSNARTTTKALKAYFIYA
HHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHEEEEEEC
PPTQTAPADPPQDYSVEEPTVSSEPITSPPNTTQLTVDVEPAAKVIPKPTEKLAPKTTEQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHCCCCCHHHHCCCCHHH
IAKPLEVSAQASNRAVSKTPTQDQTQQSAKEAIKPQKAEVQSSSAQAASTQQSDTGEQSS
HHCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHCHHHHHHCCCCCCCCCCC
GAAGSVGLFTQRYFERQREQALDDLVLEQANHYSKRSTMSEMSPEMEVLIVPNADDFSGP
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCC
TSLDLELDPNRIVRKGDTCYRVVKVGTQINPYAENLGFPFNCSGKKMNQEIDDAIKAQLD
CEEEEEECCHHHHHCCCHHEEHHHHCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
KMMVKRPKD
HHHHCCCCC
>Mature Secondary Structure 
PFCATSFSATAQGATDLNTKPFSAHAEPLGSDISLNLHEANQKDIDSTFQTSSKLSGRE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCHH
WSQYFNLKPLFGVILGHGLLLLLLIFLWRTQSEHLGLSFTESSSNARTTTKALKAYFIYA
HHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHEEEEEEC
PPTQTAPADPPQDYSVEEPTVSSEPITSPPNTTQLTVDVEPAAKVIPKPTEKLAPKTTEQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHCCCCCHHHHCCCCHHH
IAKPLEVSAQASNRAVSKTPTQDQTQQSAKEAIKPQKAEVQSSSAQAASTQQSDTGEQSS
HHCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHCHHHHHHCCCCCCCCCCC
GAAGSVGLFTQRYFERQREQALDDLVLEQANHYSKRSTMSEMSPEMEVLIVPNADDFSGP
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCC
TSLDLELDPNRIVRKGDTCYRVVKVGTQINPYAENLGFPFNCSGKKMNQEIDDAIKAQLD
CEEEEEECCHHHHHCCCHHEEHHHHCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
KMMVKRPKD
HHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA