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The map label for this gene is 117920215

Identifier: 117920215

GI number: 117920215

Start: 2081859

End: 2082185

Strand: Direct

Name: 117920215

Synonym: Shewana3_1768

Alternate gene names: NA

Gene position: 2081859-2082185 (Clockwise)

Preceding gene: 117920214

Following gene: 117920216

Centisome position: 41.87

GC content: 50.76

Gene sequence:

>327_bases
ATGGTCGATCTTGTCGTCAATTTTGATACCTTACATCAGCTTTACCGCGCCTATATGCCGTTTATTAAACCGGCAGGGCT
GTTTGTCGCCACCGGGGAAACCCATTATCTCGGTGAGACATTAACCATTGCCTATCGTTTACCCGGCGCGACCACCTCAA
ACGAGTTTCGTGGCGTGGTTGTGTGGATTAATCCGCTGGGCGCATCGGGCGGCCGTCCCGTGGGGATCGGGATTAAAATC
GTTTCTGATCCCGATAGCCATAAACACCATATCGAAAAATTGTTATCCCGTGAGCTCGCTTCCGGCGACTTAACCTGCAC
TATGTAA

Upstream 100 bases:

>100_bases
AATGTGTCATAGCTTAAGTGCAATGCCGAGTGTCAATTATTTAGGCTTGTGTCAAAGTTATGTCTTAGAATATAGAGAAA
TAACAAATAAGTAACATGCC

Downstream 100 bases:

>100_bases
CTGTTATCGTGGTCAGCTAGGGTTTACATCGAGTATTGAACCTGAACTCGGGGTAACGAGTGTCGAAAAAATCTAAATTT
AACACCCTAAATCAATGCTG

Product: type IV pilus biogenesis protein pilZ

Products: NA

Alternate protein names: Type IV Pilus Assembly PilZ; Type 4 Fimbrial Biogenesis Protein PILZ; Pilus Biogenesis Protein PilZ; Tfp Pilus Assembly Protein; Type IV Fimbriae Assembly Protein; Tfp Pilus Assembly Protein PilZ

Number of amino acids: Translated: 108; Mature: 108

Protein sequence:

>108_residues
MVDLVVNFDTLHQLYRAYMPFIKPAGLFVATGETHYLGETLTIAYRLPGATTSNEFRGVVVWINPLGASGGRPVGIGIKI
VSDPDSHKHHIEKLLSRELASGDLTCTM

Sequences:

>Translated_108_residues
MVDLVVNFDTLHQLYRAYMPFIKPAGLFVATGETHYLGETLTIAYRLPGATTSNEFRGVVVWINPLGASGGRPVGIGIKI
VSDPDSHKHHIEKLLSRELASGDLTCTM
>Mature_108_residues
MVDLVVNFDTLHQLYRAYMPFIKPAGLFVATGETHYLGETLTIAYRLPGATTSNEFRGVVVWINPLGASGGRPVGIGIKI
VSDPDSHKHHIEKLLSRELASGDLTCTM

Specific function: Unknown

COG id: COG3215

COG function: function code NU; Tfp pilus assembly protein PilZ

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11796; Mature: 11796

Theoretical pI: Translated: 7.07; Mature: 7.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVDLVVNFDTLHQLYRAYMPFIKPAGLFVATGETHYLGETLTIAYRLPGATTSNEFRGVV
CEEEEECHHHHHHHHHHHCCCCCCCCEEEECCCCEECCCEEEEEEECCCCCCCCCCCEEE
VWINPLGASGGRPVGIGIKIVSDPDSHKHHIEKLLSRELASGDLTCTM
EEEECCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEC
>Mature Secondary Structure
MVDLVVNFDTLHQLYRAYMPFIKPAGLFVATGETHYLGETLTIAYRLPGATTSNEFRGVV
CEEEEECHHHHHHHHHHHCCCCCCCCEEEECCCCEECCCEEEEEEECCCCCCCCCCCEEE
VWINPLGASGGRPVGIGIKIVSDPDSHKHHIEKLLSRELASGDLTCTM
EEEECCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA