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The map label for this gene is 117919903

Identifier: 117919903

GI number: 117919903

Start: 1687207

End: 1689279

Strand: Reverse

Name: 117919903

Synonym: Shewana3_1455

Alternate gene names: NA

Gene position: 1689279-1687207 (Counterclockwise)

Preceding gene: 117919904

Following gene: 117919902

Centisome position: 33.97

GC content: 52.73

Gene sequence:

>2073_bases
ATGAGCCTGCATTTTATTCGTCCAGAATGGTTACTCGCCCTGTTGCCACTCGCCATCATCCTGTGGGCGCTGTGGCGCCA
ACACCAGAGTAATAGCGCCTGGAACCGTTATATTGCGCCGCACTTGGCCAAAATATTGGTTACAGAGGGCACGCAAAAAT
CCCGTCGACCATTGCATATCTTGGCTTTCACTTGGGTGATTGCCACCTTGGCCTTAGCTGGCCCAGCGCTCAATAAGCAA
ACCTTGCCGGTTTTTGCCGCCGAGCAAGGCCGAGTGTTGGTGATGGATATGTCCGTTTCCATGTTTGCCACCGATCTGGC
ACCCAACCGCTTAACCCAAACCAAGTTTCGGGCGACGGATTTGCTCCGCGGCTTAAAAGAAGGCGAAACTGGCCTGATTG
CCTTCGCCGGCGATGCCTTTACCATAAGCCCGCTCACCCGAGACACGGGCACGCTGCTTAATTTATTACCCACTTTAAGC
CCTGACATTATGCCCGTGTTGGGCTCAAACCTAGCGGCCGCGCTAACCCAAGCCAAAAATTTACTGGCGCAGGGCGGGCA
TCTACGGGGCGATATTATTGTGATGACAGATGGCATCACCCCGAGGCAATTCGATGAGGCTAACTCGGCCTTAGCCGGTA
GCCAATATCGGCTCGCGATCATGGGATTTGGTAGCCCACAAGGCGCGCCAATCCGCTTACCCGATGGCCAATTACAGCGG
GACAGCAGCAATGAAGTCGTTGTCGCCAAAACCGACTTTGGCTTGCTGCAAAAATTAGCCGATAACCATAATGGCATCAT
GATCCCCAATCGGGCCGATGGTCAGGATTTAGTGCAGTTGCAACATTGGTTAAGCGACAGTGGCGATGCCAAAGCCACGG
ATCTCGATGGGGAAACCTGGCAGGATCTCGGTCCTTACCTCGCCTTACTCTTACTCATCCCTGCCCTGCTGAGCTTTAGG
CAAGGCATGCTCGCCAACTGGCTGCTGATGGGATTAGCTGGCCTATTGATCGGTGCTGCGCCGCAGAATGCCCATGCCAG
TGCATGGGACTCGCTCTGGCACACCAAAGATCAACAGGCGATGCAGGCCTATCAAGCCGAAGATTACGCCAATGCCGCTC
AAAAATTCGAAACGCCACAATGGCAAGGCGCAGCGCAGTACAAGGCCGGCGAGTACGAACAGGCGCTAAAAAACTTTGAG
CAAGATAGCTCTGCTAATGGCCTGTACAATCAAGGCAACGCGCTGATGCAACTTGGTAAACCCGATAAAGCCAAGGAGCG
TTATCAGGCCGCACTCGACAAGCAGCCCGATTTTCCACAGGCCAAAGCCAACCTTGAGTTAGCAGAGAAATTGCTGAACC
AGCAACAATCGCAGCAAAATGCTGACAATCAAGAGAAGCAGTCTCAAGGCGATGAAAACCAACAGGGACAGAATCAGAAC
GATCAGCAGCAGGGACAAAACCAGCAGCAGGGTCAGCAGGGAGATCAACAATCCTCGCAAAACGACCAAGCTCAAGATCA
GTCTCAAGAGCAGCAGTCCCAACAGCAAAATAATCCTGACCAAGCGGACGAAAAACCGTCGCAGGAGCAAGAGTCTTCAT
CCGAGCAGAGTAATCTTGAGCAAGGCGCACAGGATAAACAGCAAGCGAGTGATGATAAGGCCAAGCAAGATCAGCAAGAT
GCACAGCAGGAACAACAGCAGGCCGAGCAACAAGCCAATCAGCAAAACCGCGCCGATAACAATGCAGAAGATAAAGAAGA
GCAAGCCAGCAACGAGGCCAAAATGCAGGCACAGGTCGAGGATGATAAGTCCAAAGCCGAGCAAGAACAGCAACAGGCCG
TAGCGCAAAAAGCGGATAAAGAGAAACAGTCACAGGCGGATAAAAACCCAGATACCGCAATTGAGTCTGTTGAAGCGCCG
CCGAGCAACAGCGAGCCTTTGCCCGCGGAGATGCAGCGAGCACTGCGGGGCGTGAGTGAAGATCCACAGGTGTTACTGCG
TAACAAGATGCAACTCGAATATCAAAAACGCCGTCAAAATGGCCAAATATCAAGGGATAACGAACAGTGGTGA

Upstream 100 bases:

>100_bases
CGCTGCTCACCAGCATTTGGATAGCCTTAGGTCAGTTATCACTGTTTTCGCGGACTAAAAACCCTGTTCCATCTGCAACA
CCACGGGGGGATGTTCGTTA

Downstream 100 bases:

>100_bases
TCAGACAATTTTTTATCCTCCTCACGCTTTGCATCGCGGTCATTCAGCCCGCCTTTGCCCTGAGCAAACTCGAGGCGTCG
GTCGATCGCAATCCGGTGAT

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: Von Willebrand Factor Type A; TPR Domain-Containing Protein; BatB Protein; TPR Domain Protein; Tetratricopeptide TPR_2 Repeat Protein; Von Willebrand Factor Type A Domain-Containing Protein; Aerotolerance-Related Membrane Protein; Transmembrane Protein; TPR Repeat; TPR Domain Protein In Aerotolerance Operon; Tetratricopeptide Repeat Family; Unknwon Proteins; Transmembrane TPR Repeat-Containing Protein; Ssl1 Domain Protein; Batb Protein; BatB/BatC Protein; Von Willebrand Factor Type A Domain Protein; Tetratricopeptide Repeat And VWA Domain-Containing Protein; Tpr Domain Protein; Tetratricopeptide Repeat Domain Protein; Protein Containing A Von Willebrand Factor Type A Domain

Number of amino acids: Translated: 690; Mature: 689

Protein sequence:

>690_residues
MSLHFIRPEWLLALLPLAIILWALWRQHQSNSAWNRYIAPHLAKILVTEGTQKSRRPLHILAFTWVIATLALAGPALNKQ
TLPVFAAEQGRVLVMDMSVSMFATDLAPNRLTQTKFRATDLLRGLKEGETGLIAFAGDAFTISPLTRDTGTLLNLLPTLS
PDIMPVLGSNLAAALTQAKNLLAQGGHLRGDIIVMTDGITPRQFDEANSALAGSQYRLAIMGFGSPQGAPIRLPDGQLQR
DSSNEVVVAKTDFGLLQKLADNHNGIMIPNRADGQDLVQLQHWLSDSGDAKATDLDGETWQDLGPYLALLLLIPALLSFR
QGMLANWLLMGLAGLLIGAAPQNAHASAWDSLWHTKDQQAMQAYQAEDYANAAQKFETPQWQGAAQYKAGEYEQALKNFE
QDSSANGLYNQGNALMQLGKPDKAKERYQAALDKQPDFPQAKANLELAEKLLNQQQSQQNADNQEKQSQGDENQQGQNQN
DQQQGQNQQQGQQGDQQSSQNDQAQDQSQEQQSQQQNNPDQADEKPSQEQESSSEQSNLEQGAQDKQQASDDKAKQDQQD
AQQEQQQAEQQANQQNRADNNAEDKEEQASNEAKMQAQVEDDKSKAEQEQQQAVAQKADKEKQSQADKNPDTAIESVEAP
PSNSEPLPAEMQRALRGVSEDPQVLLRNKMQLEYQKRRQNGQISRDNEQW

Sequences:

>Translated_690_residues
MSLHFIRPEWLLALLPLAIILWALWRQHQSNSAWNRYIAPHLAKILVTEGTQKSRRPLHILAFTWVIATLALAGPALNKQ
TLPVFAAEQGRVLVMDMSVSMFATDLAPNRLTQTKFRATDLLRGLKEGETGLIAFAGDAFTISPLTRDTGTLLNLLPTLS
PDIMPVLGSNLAAALTQAKNLLAQGGHLRGDIIVMTDGITPRQFDEANSALAGSQYRLAIMGFGSPQGAPIRLPDGQLQR
DSSNEVVVAKTDFGLLQKLADNHNGIMIPNRADGQDLVQLQHWLSDSGDAKATDLDGETWQDLGPYLALLLLIPALLSFR
QGMLANWLLMGLAGLLIGAAPQNAHASAWDSLWHTKDQQAMQAYQAEDYANAAQKFETPQWQGAAQYKAGEYEQALKNFE
QDSSANGLYNQGNALMQLGKPDKAKERYQAALDKQPDFPQAKANLELAEKLLNQQQSQQNADNQEKQSQGDENQQGQNQN
DQQQGQNQQQGQQGDQQSSQNDQAQDQSQEQQSQQQNNPDQADEKPSQEQESSSEQSNLEQGAQDKQQASDDKAKQDQQD
AQQEQQQAEQQANQQNRADNNAEDKEEQASNEAKMQAQVEDDKSKAEQEQQQAVAQKADKEKQSQADKNPDTAIESVEAP
PSNSEPLPAEMQRALRGVSEDPQVLLRNKMQLEYQKRRQNGQISRDNEQW
>Mature_689_residues
SLHFIRPEWLLALLPLAIILWALWRQHQSNSAWNRYIAPHLAKILVTEGTQKSRRPLHILAFTWVIATLALAGPALNKQT
LPVFAAEQGRVLVMDMSVSMFATDLAPNRLTQTKFRATDLLRGLKEGETGLIAFAGDAFTISPLTRDTGTLLNLLPTLSP
DIMPVLGSNLAAALTQAKNLLAQGGHLRGDIIVMTDGITPRQFDEANSALAGSQYRLAIMGFGSPQGAPIRLPDGQLQRD
SSNEVVVAKTDFGLLQKLADNHNGIMIPNRADGQDLVQLQHWLSDSGDAKATDLDGETWQDLGPYLALLLLIPALLSFRQ
GMLANWLLMGLAGLLIGAAPQNAHASAWDSLWHTKDQQAMQAYQAEDYANAAQKFETPQWQGAAQYKAGEYEQALKNFEQ
DSSANGLYNQGNALMQLGKPDKAKERYQAALDKQPDFPQAKANLELAEKLLNQQQSQQNADNQEKQSQGDENQQGQNQND
QQQGQNQQQGQQGDQQSSQNDQAQDQSQEQQSQQQNNPDQADEKPSQEQESSSEQSNLEQGAQDKQQASDDKAKQDQQDA
QQEQQQAEQQANQQNRADNNAEDKEEQASNEAKMQAQVEDDKSKAEQEQQQAVAQKADKEKQSQADKNPDTAIESVEAPP
SNSEPLPAEMQRALRGVSEDPQVLLRNKMQLEYQKRRQNGQISRDNEQW

Specific function: Unknown

COG id: COG2304

COG function: function code R; Uncharacterized protein containing a von Willebrand factor type A (vWA) domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 76454; Mature: 76323

Theoretical pI: Translated: 4.49; Mature: 4.49

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION ; PS50234 VWFA ; PS00678 WD_REPEATS_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLHFIRPEWLLALLPLAIILWALWRQHQSNSAWNRYIAPHLAKILVTEGTQKSRRPLHI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHH
LAFTWVIATLALAGPALNKQTLPVFAAEQGRVLVMDMSVSMFATDLAPNRLTQTKFRATD
HHHHHHHHHHHHHCCCCCCCCCCEEECCCCCEEEEECCHHHHHHHCCCCHHHHHHHHHHH
LLRGLKEGETGLIAFAGDAFTISPLTRDTGTLLNLLPTLSPDIMPVLGSNLAAALTQAKN
HHHHHHCCCCEEEEEECCCEEECCCCCCHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHH
LLAQGGHLRGDIIVMTDGITPRQFDEANSALAGSQYRLAIMGFGSPQGAPIRLPDGQLQR
HHHCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCEEECCCCCCCC
DSSNEVVVAKTDFGLLQKLADNHNGIMIPNRADGQDLVQLQHWLSDSGDAKATDLDGETW
CCCCCEEEEECCHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHH
QDLGPYLALLLLIPALLSFRQGMLANWLLMGLAGLLIGAAPQNAHASAWDSLWHTKDQQA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHH
MQAYQAEDYANAAQKFETPQWQGAAQYKAGEYEQALKNFEQDSSANGLYNQGNALMQLGK
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHEECCC
PDKAKERYQAALDKQPDFPQAKANLELAEKLLNQQQSQQNADNQEKQSQGDENQQGQNQN
CHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCC
DQQQGQNQQQGQQGDQQSSQNDQAQDQSQEQQSQQQNNPDQADEKPSQEQESSSEQSNLE
HHHHCCCHHHHHCCCHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH
QGAQDKQQASDDKAKQDQQDAQQEQQQAEQQANQQNRADNNAEDKEEQASNEAKMQAQVE
HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
DDKSKAEQEQQQAVAQKADKEKQSQADKNPDTAIESVEAPPSNSEPLPAEMQRALRGVSE
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHCCCCC
DPQVLLRNKMQLEYQKRRQNGQISRDNEQW
CHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
SLHFIRPEWLLALLPLAIILWALWRQHQSNSAWNRYIAPHLAKILVTEGTQKSRRPLHI
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHH
LAFTWVIATLALAGPALNKQTLPVFAAEQGRVLVMDMSVSMFATDLAPNRLTQTKFRATD
HHHHHHHHHHHHHCCCCCCCCCCEEECCCCCEEEEECCHHHHHHHCCCCHHHHHHHHHHH
LLRGLKEGETGLIAFAGDAFTISPLTRDTGTLLNLLPTLSPDIMPVLGSNLAAALTQAKN
HHHHHHCCCCEEEEEECCCEEECCCCCCHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHH
LLAQGGHLRGDIIVMTDGITPRQFDEANSALAGSQYRLAIMGFGSPQGAPIRLPDGQLQR
HHHCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCEEECCCCCCCC
DSSNEVVVAKTDFGLLQKLADNHNGIMIPNRADGQDLVQLQHWLSDSGDAKATDLDGETW
CCCCCEEEEECCHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHH
QDLGPYLALLLLIPALLSFRQGMLANWLLMGLAGLLIGAAPQNAHASAWDSLWHTKDQQA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHH
MQAYQAEDYANAAQKFETPQWQGAAQYKAGEYEQALKNFEQDSSANGLYNQGNALMQLGK
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHEECCC
PDKAKERYQAALDKQPDFPQAKANLELAEKLLNQQQSQQNADNQEKQSQGDENQQGQNQN
CHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCC
DQQQGQNQQQGQQGDQQSSQNDQAQDQSQEQQSQQQNNPDQADEKPSQEQESSSEQSNLE
HHHHCCCHHHHHCCCHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH
QGAQDKQQASDDKAKQDQQDAQQEQQQAEQQANQQNRADNNAEDKEEQASNEAKMQAQVE
HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
DDKSKAEQEQQQAVAQKADKEKQSQADKNPDTAIESVEAPPSNSEPLPAEMQRALRGVSE
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHCCCCC
DPQVLLRNKMQLEYQKRRQNGQISRDNEQW
CHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA