Click here to switch to the map view.

The map label for this gene is 117919902

Identifier: 117919902

GI number: 117919902

Start: 1685552

End: 1687213

Strand: Reverse

Name: 117919902

Synonym: Shewana3_1454

Alternate gene names: NA

Gene position: 1687213-1685552 (Counterclockwise)

Preceding gene: 117919903

Following gene: 117919901

Centisome position: 33.93

GC content: 54.33

Gene sequence:

>1662_bases
GTGGTGATCAGACAATTTTTTATCCTCCTCACGCTTTGCATCGCGGTCATTCAGCCCGCCTTTGCCCTGAGCAAACTCGA
GGCGTCGGTCGATCGCAATCCGGTGATGGAGGGAGAGTACTTTGTGCTCAATGTCAGTGCCGACGATGAGGTCGACACGG
GTAAACTCGATACCTCCATCCTGCTTAAGGATTTCATCGTGGGTCGCACCAGCGTGAGCCGTAGCACCCAGATAATGAAC
TTCGATGCGGTTAAAGAAACTCGCTGGCAAGTACTGCTTGCCCCAAAGCAAAAGGGCCAACTCACTATTCCATCCTTTAG
CATTGATGGCGTCAGCTCCGCCGAAATTCCCCTCAAGGTCGTCGAAGCGGGCGCACAACCTGAGCAGGCCAAAAATCTGT
TTATCGATGCCAAAGTCTCGACCGATGAGGCCTACGTCGGCCAGCTTATCACCTACAAAGTGAAGCTCTACCTTGCGGTC
GAACTGCAACGCGGTGTGCTCAATGCCCCCGTTATCGAAGGCGCGCAGATTAAGCAAATTGGCGAAGACAAGGACGGCTC
GGAGATCATCGAAGGCCGTCGTTACCGCGTGATTGAACGCACCTATGGCATCATTCCCGACTTACCCGGCCAAGTGAACA
TCAAAGGCGCGACCTTTTCTGGCGATGTATTAGTGGAATCCCAACGCCGCGGCGGCATGTTTGGCTTTAACGAGAGCCGC
CCAATGCAGGCTGGCGCGCCCTCCTTAAGCATTCAAGTCGAACCTGCGCCAACGAGCTTTCAAGGCCAATGGCTTGTGGC
CGATTTAGTGGCCTTAAAAGAGAGTTTTCCTGAGGATGTAAAAGAGTTTACCGTCGGAAGCCCCATCACCCGCACGCTCA
CGTTATTGGCCTCCAACGCCGATGAGAATAGCCTGCCAGATATCGCCCAAAACCTGCCGCCAGAGCTCAAATCCTATCCC
GAAAAACCTCAGCGTCAGAGCTTTGTGCGCGACGCGCAGATAGTGTCACAGTACAGTATTACCTCGGCTATCGTCCCCAG
TAAGGCAGGCACTTTTACCTTACCCGAAGTGAAAGTACCTTGGTGGAATCCGCATCTTAAACGCCAAGAAATGGCAACCC
TGCCCGCCCGTACCATTCAAGTAAAAGGTGGCGCCGTGGTCGATACGCCCATCGAACCCAACTGGCAGGCAAATACCAGC
GAGAGCAGTGAAAGCCATTGGAGCGCGAATCTGTTCGCCCTGCTGTGGCTGGTGACATTAGTTGCTTGGGCCGTCACTTT
TGTCGCTTGGCGACGCGCGCTTAAGCGCCAACCGACGGTCCATACACAAGTCGCCTCGCAACCGCTCGCTCTTGGCACAG
GCATTAAGGGCTTAGAGCAAGCCTGCGCTAAAGGCAATGTCAGTGATATTTTGCAGCAATTGCAGCAATACTGTAGTGAG
CAGGCCGCTCGCCCTATGACGCTCGATAAAATTGCGGCGCAGTCGAGCGAGTTAGCAGAGGCGATTCGTCAGCTGCAAGC
CTTGGCCTACGGCGGCAAAGCCAATAGCGACGCCCAACTGGCAAGCGCTGTAAAAGCATTGTTAAGCGCGGTGAAAAGCG
GCAAGCTACACCCTATGGCGCAGCAATCTACGCAATTACAACCGCTGAACCCCAATGGCTAA

Upstream 100 bases:

>100_bases
GGGGCGTGAGTGAAGATCCACAGGTGTTACTGCGTAACAAGATGCAACTCGAATATCAAAAACGCCGTCAAAATGGCCAA
ATATCAAGGGATAACGAACA

Downstream 100 bases:

>100_bases
ACAGAGACGGATAAATCAAAACGACGCACGGCTTAATCGAATGAGTAAGGTGTAATCTTTTGAATCGTAAAATAAAAAGA
AAATATCGAAAAAATGTTTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 553; Mature: 553

Protein sequence:

>553_residues
MVIRQFFILLTLCIAVIQPAFALSKLEASVDRNPVMEGEYFVLNVSADDEVDTGKLDTSILLKDFIVGRTSVSRSTQIMN
FDAVKETRWQVLLAPKQKGQLTIPSFSIDGVSSAEIPLKVVEAGAQPEQAKNLFIDAKVSTDEAYVGQLITYKVKLYLAV
ELQRGVLNAPVIEGAQIKQIGEDKDGSEIIEGRRYRVIERTYGIIPDLPGQVNIKGATFSGDVLVESQRRGGMFGFNESR
PMQAGAPSLSIQVEPAPTSFQGQWLVADLVALKESFPEDVKEFTVGSPITRTLTLLASNADENSLPDIAQNLPPELKSYP
EKPQRQSFVRDAQIVSQYSITSAIVPSKAGTFTLPEVKVPWWNPHLKRQEMATLPARTIQVKGGAVVDTPIEPNWQANTS
ESSESHWSANLFALLWLVTLVAWAVTFVAWRRALKRQPTVHTQVASQPLALGTGIKGLEQACAKGNVSDILQQLQQYCSE
QAARPMTLDKIAAQSSELAEAIRQLQALAYGGKANSDAQLASAVKALLSAVKSGKLHPMAQQSTQLQPLNPNG

Sequences:

>Translated_553_residues
MVIRQFFILLTLCIAVIQPAFALSKLEASVDRNPVMEGEYFVLNVSADDEVDTGKLDTSILLKDFIVGRTSVSRSTQIMN
FDAVKETRWQVLLAPKQKGQLTIPSFSIDGVSSAEIPLKVVEAGAQPEQAKNLFIDAKVSTDEAYVGQLITYKVKLYLAV
ELQRGVLNAPVIEGAQIKQIGEDKDGSEIIEGRRYRVIERTYGIIPDLPGQVNIKGATFSGDVLVESQRRGGMFGFNESR
PMQAGAPSLSIQVEPAPTSFQGQWLVADLVALKESFPEDVKEFTVGSPITRTLTLLASNADENSLPDIAQNLPPELKSYP
EKPQRQSFVRDAQIVSQYSITSAIVPSKAGTFTLPEVKVPWWNPHLKRQEMATLPARTIQVKGGAVVDTPIEPNWQANTS
ESSESHWSANLFALLWLVTLVAWAVTFVAWRRALKRQPTVHTQVASQPLALGTGIKGLEQACAKGNVSDILQQLQQYCSE
QAARPMTLDKIAAQSSELAEAIRQLQALAYGGKANSDAQLASAVKALLSAVKSGKLHPMAQQSTQLQPLNPNG
>Mature_553_residues
MVIRQFFILLTLCIAVIQPAFALSKLEASVDRNPVMEGEYFVLNVSADDEVDTGKLDTSILLKDFIVGRTSVSRSTQIMN
FDAVKETRWQVLLAPKQKGQLTIPSFSIDGVSSAEIPLKVVEAGAQPEQAKNLFIDAKVSTDEAYVGQLITYKVKLYLAV
ELQRGVLNAPVIEGAQIKQIGEDKDGSEIIEGRRYRVIERTYGIIPDLPGQVNIKGATFSGDVLVESQRRGGMFGFNESR
PMQAGAPSLSIQVEPAPTSFQGQWLVADLVALKESFPEDVKEFTVGSPITRTLTLLASNADENSLPDIAQNLPPELKSYP
EKPQRQSFVRDAQIVSQYSITSAIVPSKAGTFTLPEVKVPWWNPHLKRQEMATLPARTIQVKGGAVVDTPIEPNWQANTS
ESSESHWSANLFALLWLVTLVAWAVTFVAWRRALKRQPTVHTQVASQPLALGTGIKGLEQACAKGNVSDILQQLQQYCSE
QAARPMTLDKIAAQSSELAEAIRQLQALAYGGKANSDAQLASAVKALLSAVKSGKLHPMAQQSTQLQPLNPNG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60314; Mature: 60314

Theoretical pI: Translated: 6.21; Mature: 6.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVIRQFFILLTLCIAVIQPAFALSKLEASVDRNPVMEGEYFVLNVSADDEVDTGKLDTSI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCHHHH
LLKDFIVGRTSVSRSTQIMNFDAVKETRWQVLLAPKQKGQLTIPSFSIDGVSSAEIPLKV
HHHHHHHCCCCCCCCCEEEECHHHHCCCEEEEECCCCCCCEECCCCCCCCCCCCCCCHHE
VEAGAQPEQAKNLFIDAKVSTDEAYVGQLITYKVKLYLAVELQRGVLNAPVIEGAQIKQI
ECCCCCCCHHCCEEEEEEECCCHHHHHHHHEEEEEEEEEEEECCCCCCCCCCCCCHHHHC
GEDKDGSEIIEGRRYRVIERTYGIIPDLPGQVNIKGATFSGDVLVESQRRGGMFGFNESR
CCCCCCHHHHCCCCEEEHHHHCCCCCCCCCCEEEEEEEECCCEEEECCCCCCCCCCCCCC
PMQAGAPSLSIQVEPAPTSFQGQWLVADLVALKESFPEDVKEFTVGSPITRTLTLLASNA
CCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCHHHHHHHCCCCCHHHHHHHHCCCC
DENSLPDIAQNLPPELKSYPEKPQRQSFVRDAQIVSQYSITSAIVPSKAGTFTLPEVKVP
CCCCCCHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCEECC
WWNPHLKRQEMATLPARTIQVKGGAVVDTPIEPNWQANTSESSESHWSANLFALLWLVTL
CCCCCCCHHHHHHCCCEEEEECCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
VAWAVTFVAWRRALKRQPTVHTQVASQPLALGTGIKGLEQACAKGNVSDILQQLQQYCSE
HHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHH
QAARPMTLDKIAAQSSELAEAIRQLQALAYGGKANSDAQLASAVKALLSAVKSGKLHPMA
HCCCCCCHHHHHHCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCH
QQSTQLQPLNPNG
HCCCCCCCCCCCC
>Mature Secondary Structure
MVIRQFFILLTLCIAVIQPAFALSKLEASVDRNPVMEGEYFVLNVSADDEVDTGKLDTSI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCHHHH
LLKDFIVGRTSVSRSTQIMNFDAVKETRWQVLLAPKQKGQLTIPSFSIDGVSSAEIPLKV
HHHHHHHCCCCCCCCCEEEECHHHHCCCEEEEECCCCCCCEECCCCCCCCCCCCCCCHHE
VEAGAQPEQAKNLFIDAKVSTDEAYVGQLITYKVKLYLAVELQRGVLNAPVIEGAQIKQI
ECCCCCCCHHCCEEEEEEECCCHHHHHHHHEEEEEEEEEEEECCCCCCCCCCCCCHHHHC
GEDKDGSEIIEGRRYRVIERTYGIIPDLPGQVNIKGATFSGDVLVESQRRGGMFGFNESR
CCCCCCHHHHCCCCEEEHHHHCCCCCCCCCCEEEEEEEECCCEEEECCCCCCCCCCCCCC
PMQAGAPSLSIQVEPAPTSFQGQWLVADLVALKESFPEDVKEFTVGSPITRTLTLLASNA
CCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCHHHHHHHCCCCCHHHHHHHHCCCC
DENSLPDIAQNLPPELKSYPEKPQRQSFVRDAQIVSQYSITSAIVPSKAGTFTLPEVKVP
CCCCCCHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCEECC
WWNPHLKRQEMATLPARTIQVKGGAVVDTPIEPNWQANTSESSESHWSANLFALLWLVTL
CCCCCCCHHHHHHCCCEEEEECCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
VAWAVTFVAWRRALKRQPTVHTQVASQPLALGTGIKGLEQACAKGNVSDILQQLQQYCSE
HHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHH
QAARPMTLDKIAAQSSELAEAIRQLQALAYGGKANSDAQLASAVKALLSAVKSGKLHPMA
HCCCCCCHHHHHHCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCH
QQSTQLQPLNPNG
HCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA