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The map label for this gene is fliC [H]

Identifier: 117919780

GI number: 117919780

Start: 1545522

End: 1546343

Strand: Direct

Name: fliC [H]

Synonym: Shewana3_1332

Alternate gene names: 117919780

Gene position: 1545522-1546343 (Clockwise)

Preceding gene: 117919779

Following gene: 117919781

Centisome position: 31.08

GC content: 43.19

Gene sequence:

>822_bases
ATGGCTATTACAGTTAATACCAACGTGACTTCGATGAAGGCACAGAAAAATTTAAATACATCCAGTAGTGGTTTAGCAAC
CTCTATGGAACGTCTATCGAGCGGTCTGCGTATTAACAGTGCGAAAGATGACGCTGCTGGTCTAGCTATTTCTAACCGCT
TAAATAGCCAAGTTCGTGGCCTAGATGTGGGCATGCGTAATGCTAACGATGCGATTTCTATTGCTCAAATCGCTGAAGGT
GCGATGCAAGAACAAACTAACATGTTGCAGCGTATGCGTGACTTGACTGTACAAGCTGAAAACGGTGCAAATAGTACCGA
TGATTTAGATGCAATACAAAAAGAGATCAATCAATTATCTGAAGAAATTACTGCCATTGGTGACAGCACCGCTTTTGGTA
ATACTCTACTGATGACTGGCCTATTTTCAACGGGTAAAACGTTCCAAGTGGGTCACCAAGAAGGTGAAGATATCACTATT
TCCGTTGGTACTACTAATGCCGGGAGTTTATCTGTCAACGCATTAGCTATTGCTAGCGCAGGAGGTCGTTCCACTGCGCT
AGCAAACATTGATGCAGCGATAAAAACCATTGATAACCAACGTGCAAACTTAGGCGCTAAACAAAACCGTTTAGCTTATA
ACATCAGCAACAGCGCGAACACTCAAGCCAACGTTGCCGATGCTAAGAGCCGCATTGTGGATGTAGACTTTGCAAAAGAA
ACCTCAGTAATGACGAAAAACCAAGTATTACAACAAACGGGGTCTGCAATGTTAGCTCAAGCTAACCAATTGCCTCAAGT
TGCGCTGTCACTACTGGGATAA

Upstream 100 bases:

>100_bases
GTGATTTTTAGGTGTAATAGCCTAAATGCACTGGTAGTTTCAAGATTGGAAATGGCCAAGCTTCGAAGTCTTGGCAAGAT
ACTTAGAAGAGGAAAATACT

Downstream 100 bases:

>100_bases
TTTACTAAGCTGAACATATCAATACAGGACGTTGCTTTTGCCTACTGTCTCCTAAAAAAGGAGATATAGTAGGCAAAGTG
TTTTTATACGTTTTTTATGT

Product: flagellin domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 272

Protein sequence:

>273_residues
MAITVNTNVTSMKAQKNLNTSSSGLATSMERLSSGLRINSAKDDAAGLAISNRLNSQVRGLDVGMRNANDAISIAQIAEG
AMQEQTNMLQRMRDLTVQAENGANSTDDLDAIQKEINQLSEEITAIGDSTAFGNTLLMTGLFSTGKTFQVGHQEGEDITI
SVGTTNAGSLSVNALAIASAGGRSTALANIDAAIKTIDNQRANLGAKQNRLAYNISNSANTQANVADAKSRIVDVDFAKE
TSVMTKNQVLQQTGSAMLAQANQLPQVALSLLG

Sequences:

>Translated_273_residues
MAITVNTNVTSMKAQKNLNTSSSGLATSMERLSSGLRINSAKDDAAGLAISNRLNSQVRGLDVGMRNANDAISIAQIAEG
AMQEQTNMLQRMRDLTVQAENGANSTDDLDAIQKEINQLSEEITAIGDSTAFGNTLLMTGLFSTGKTFQVGHQEGEDITI
SVGTTNAGSLSVNALAIASAGGRSTALANIDAAIKTIDNQRANLGAKQNRLAYNISNSANTQANVADAKSRIVDVDFAKE
TSVMTKNQVLQQTGSAMLAQANQLPQVALSLLG
>Mature_272_residues
AITVNTNVTSMKAQKNLNTSSSGLATSMERLSSGLRINSAKDDAAGLAISNRLNSQVRGLDVGMRNANDAISIAQIAEGA
MQEQTNMLQRMRDLTVQAENGANSTDDLDAIQKEINQLSEEITAIGDSTAFGNTLLMTGLFSTGKTFQVGHQEGEDITIS
VGTTNAGSLSVNALAIASAGGRSTALANIDAAIKTIDNQRANLGAKQNRLAYNISNSANTQANVADAKSRIVDVDFAKET
SVMTKNQVLQQTGSAMLAQANQLPQVALSLLG

Specific function: Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella [H]

COG id: COG1344

COG function: function code N; Flagellin and related hook-associated proteins

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial flagellin family [H]

Homologues:

Organism=Escherichia coli, GI1788232, Length=179, Percent_Identity=46.927374301676, Blast_Score=140, Evalue=6e-35,

Paralogues:

None

Copy number: 200,000-400,000 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001492
- InterPro:   IPR001029 [H]

Pfam domain/function: PF00700 Flagellin_C; PF00669 Flagellin_N [H]

EC number: NA

Molecular weight: Translated: 28548; Mature: 28417

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAITVNTNVTSMKAQKNLNTSSSGLATSMERLSSGLRINSAKDDAAGLAISNRLNSQVRG
CEEEEECCCCHHHHHHCCCCCCCHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHC
LDVGMRNANDAISIAQIAEGAMQEQTNMLQRMRDLTVQAENGANSTDDLDAIQKEINQLS
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCHHHHHHHHHHHHHH
EEITAIGDSTAFGNTLLMTGLFSTGKTFQVGHQEGEDITISVGTTNAGSLSVNALAIASA
HHHHHCCCCCCCCCHHHHHHHHCCCCEEEECCCCCCEEEEEEECCCCCCEEEEEEEEECC
GGRSTALANIDAAIKTIDNQRANLGAKQNRLAYNISNSANTQANVADAKSRIVDVDFAKE
CCCCHHHHHHHHHHHHHCCHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHEEEEECCCH
TSVMTKNQVLQQTGSAMLAQANQLPQVALSLLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AITVNTNVTSMKAQKNLNTSSSGLATSMERLSSGLRINSAKDDAAGLAISNRLNSQVRG
EEEEECCCCHHHHHHCCCCCCCHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHC
LDVGMRNANDAISIAQIAEGAMQEQTNMLQRMRDLTVQAENGANSTDDLDAIQKEINQLS
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCHHHHHHHHHHHHHH
EEITAIGDSTAFGNTLLMTGLFSTGKTFQVGHQEGEDITISVGTTNAGSLSVNALAIASA
HHHHHCCCCCCCCCHHHHHHHHCCCCEEEECCCCCCEEEEEEECCCCCCEEEEEEEEECC
GGRSTALANIDAAIKTIDNQRANLGAKQNRLAYNISNSANTQANVADAKSRIVDVDFAKE
CCCCHHHHHHHHHHHHHCCHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHEEEEECCCH
TSVMTKNQVLQQTGSAMLAQANQLPQVALSLLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8996114 [H]