| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is flgL [H]
Identifier: 117919779
GI number: 117919779
Start: 1544208
End: 1545419
Strand: Direct
Name: flgL [H]
Synonym: Shewana3_1331
Alternate gene names: 117919779
Gene position: 1544208-1545419 (Clockwise)
Preceding gene: 117919778
Following gene: 117919780
Centisome position: 31.06
GC content: 42.9
Gene sequence:
>1212_bases ATGCGACTATCATCCGCGCAGATCTTTAATCAAAGCATTACGAGTGTACTGCAAAAGCAAACGGCAACTAGCAAGATCCT CGAACAGCTCAGTAGTGGCAAAAAAGTCAATACTGCAGGTGATGATCCTGTCGCGGCGCTAGGTATCGATAACCTGAATC AACGCAATGCCTTAGTCGATCAATTTATGAAGAATATTGACTACGCGACTAATCGATTAGCAGTAACTGAAAGTAAGTTG GGGAGTGCCGAAAATCTGGCATCTTCCATACGTGAACAAGTTATGCGAGCGGTAAACGGCACTCTCGCGGATTCTGAGCG GCAAATGATTGCCGATGAAATGAAAGGCAGCTTAGAAGAACTCTTATCTATTGCCAATAGTAAGGATGAATCTGGCAATT ATATGTTTTCTGGCTACAGCACTGATAAAGAGCCTTTTGCTTTCGATAACTCTACACCACCCAAAATAGTTTATAGCGGT GATTCTGGCATTCGAAATAGTTTAGTGCAGTCTGGCGTTGCACTAGGAACTAATGTCCCTGGCGACACCGCTTTTATGAA AGCCCCCAATGGACTTGGCGATTATAGTGTCAATTATTTGGCCAGCCAGCAGGGCGAGTTTAGTGTTAAAACGGCGAAGA TTGCTGATCCAGCAACTTATCTAGCTGATACATATACATTTAATTTTTCAGATAATGGTTCTGGTGGAACCAATTTACAA GTACTTGATTCAGCCAATAATCCAGTGGCGAACATTGCTAATTTTGATGCGGCAACCCCTGTAAGTTTTAATGGTATTGA AGTCAACATTTCTGGAAAACCCAGCGCTGGCGATAGTTTCACCATGGAGCCACAGTCTGAAGTCAGCATTTTCGATACAA TCAGTCGTGCGATCGCATTAATTGAAGATCCTAATTCAGCTAACACACCTCAAGGTCGATCTCAGTTGGCACAGATATTG AATGACATCGATAGTGGTGTCAATCAGATCAGTTCTGCCAGAAGTGTGGCGGGGAATAATCTGAAAGCCGTTGAAAGCTA CAAAGATACTCACATCGAGGAACAAGTGTTGAATACATCTGCTCTTTCTCTACTTGAGGATCTTGATTACGCGTCAGCGA TTACGGAATTTGCAAAGCAGCAGCTTGCATTGAACGCAGTCTCTAGCGTGTTTAGTAAGGTGGGTTCTGTTTCCCTGTTT GATTATATTTAA
Upstream 100 bases:
>100_bases TGCGTTTTCAACAAGCTTATCAAGCCTCAGCCCGTATCATGACTACGGCACAACAAATTTTTGACACCCTATTAACTTCA GTGCGTTAGGAGATTTAATC
Downstream 100 bases:
>100_bases TCGTGATTTTTAGGTGTAATAGCCTAAATGCACTGGTAGTTTCAAGATTGGAAATGGCCAAGCTTCGAAGTCTTGGCAAG ATACTTAGAAGAGGAAAATA
Product: flagellar hook-associated protein FlgL
Products: NA
Alternate protein names: HAP3; Hook-filament junction protein [H]
Number of amino acids: Translated: 403; Mature: 403
Protein sequence:
>403_residues MRLSSAQIFNQSITSVLQKQTATSKILEQLSSGKKVNTAGDDPVAALGIDNLNQRNALVDQFMKNIDYATNRLAVTESKL GSAENLASSIREQVMRAVNGTLADSERQMIADEMKGSLEELLSIANSKDESGNYMFSGYSTDKEPFAFDNSTPPKIVYSG DSGIRNSLVQSGVALGTNVPGDTAFMKAPNGLGDYSVNYLASQQGEFSVKTAKIADPATYLADTYTFNFSDNGSGGTNLQ VLDSANNPVANIANFDAATPVSFNGIEVNISGKPSAGDSFTMEPQSEVSIFDTISRAIALIEDPNSANTPQGRSQLAQIL NDIDSGVNQISSARSVAGNNLKAVESYKDTHIEEQVLNTSALSLLEDLDYASAITEFAKQQLALNAVSSVFSKVGSVSLF DYI
Sequences:
>Translated_403_residues MRLSSAQIFNQSITSVLQKQTATSKILEQLSSGKKVNTAGDDPVAALGIDNLNQRNALVDQFMKNIDYATNRLAVTESKL GSAENLASSIREQVMRAVNGTLADSERQMIADEMKGSLEELLSIANSKDESGNYMFSGYSTDKEPFAFDNSTPPKIVYSG DSGIRNSLVQSGVALGTNVPGDTAFMKAPNGLGDYSVNYLASQQGEFSVKTAKIADPATYLADTYTFNFSDNGSGGTNLQ VLDSANNPVANIANFDAATPVSFNGIEVNISGKPSAGDSFTMEPQSEVSIFDTISRAIALIEDPNSANTPQGRSQLAQIL NDIDSGVNQISSARSVAGNNLKAVESYKDTHIEEQVLNTSALSLLEDLDYASAITEFAKQQLALNAVSSVFSKVGSVSLF DYI >Mature_403_residues MRLSSAQIFNQSITSVLQKQTATSKILEQLSSGKKVNTAGDDPVAALGIDNLNQRNALVDQFMKNIDYATNRLAVTESKL GSAENLASSIREQVMRAVNGTLADSERQMIADEMKGSLEELLSIANSKDESGNYMFSGYSTDKEPFAFDNSTPPKIVYSG DSGIRNSLVQSGVALGTNVPGDTAFMKAPNGLGDYSVNYLASQQGEFSVKTAKIADPATYLADTYTFNFSDNGSGGTNLQ VLDSANNPVANIANFDAATPVSFNGIEVNISGKPSAGDSFTMEPQSEVSIFDTISRAIALIEDPNSANTPQGRSQLAQIL NDIDSGVNQISSARSVAGNNLKAVESYKDTHIEEQVLNTSALSLLEDLDYASAITEFAKQQLALNAVSSVFSKVGSVSLF DYI
Specific function: Unknown
COG id: COG1344
COG function: function code N; Flagellin and related hook-associated proteins
Gene ontology:
Cell location: Secreted. Bacterial flagellum [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial flagellin family [H]
Homologues:
Organism=Escherichia coli, GI1787324, Length=147, Percent_Identity=33.3333333333333, Blast_Score=92, Evalue=6e-20,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013384 - InterPro: IPR001029 [H]
Pfam domain/function: PF00669 Flagellin_N [H]
EC number: NA
Molecular weight: Translated: 42895; Mature: 42895
Theoretical pI: Translated: 4.20; Mature: 4.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLSSAQIFNQSITSVLQKQTATSKILEQLSSGKKVNTAGDDPVAALGIDNLNQRNALVD CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEECCCCCCHHHHHHH QFMKNIDYATNRLAVTESKLGSAENLASSIREQVMRAVNGTLADSERQMIADEMKGSLEE HHHHHHHHHHCCEEEEHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH LLSIANSKDESGNYMFSGYSTDKEPFAFDNSTPPKIVYSGDSGIRNSLVQSGVALGTNVP HHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHCCHHCCCCCC GDTAFMKAPNGLGDYSVNYLASQQGEFSVKTAKIADPATYLADTYTFNFSDNGSGGTNLQ CCCEEEECCCCCCCCCHHHHHCCCCCCEEEEEECCCCHHHHHEEEEEECCCCCCCCCCEE VLDSANNPVANIANFDAATPVSFNGIEVNISGKPSAGDSFTMEPQSEVSIFDTISRAIAL EEECCCCCHHHHCCCCCCCCCEECCEEEEECCCCCCCCCCEECCCHHHHHHHHHHHHHHH IEDPNSANTPQGRSQLAQILNDIDSGVNQISSARSVAGNNLKAVESYKDTHIEEQVLNTS EECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH ALSLLEDLDYASAITEFAKQQLALNAVSSVFSKVGSVSLFDYI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC >Mature Secondary Structure MRLSSAQIFNQSITSVLQKQTATSKILEQLSSGKKVNTAGDDPVAALGIDNLNQRNALVD CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEECCCCCCHHHHHHH QFMKNIDYATNRLAVTESKLGSAENLASSIREQVMRAVNGTLADSERQMIADEMKGSLEE HHHHHHHHHHCCEEEEHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH LLSIANSKDESGNYMFSGYSTDKEPFAFDNSTPPKIVYSGDSGIRNSLVQSGVALGTNVP HHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHCCHHCCCCCC GDTAFMKAPNGLGDYSVNYLASQQGEFSVKTAKIADPATYLADTYTFNFSDNGSGGTNLQ CCCEEEECCCCCCCCCHHHHHCCCCCCEEEEEECCCCHHHHHEEEEEECCCCCCCCCCEE VLDSANNPVANIANFDAATPVSFNGIEVNISGKPSAGDSFTMEPQSEVSIFDTISRAIAL EEECCCCCHHHHCCCCCCCCCEECCEEEEECCCCCCCCCCEECCCHHHHHHHHHHHHHHH IEDPNSANTPQGRSQLAQILNDIDSGVNQISSARSVAGNNLKAVESYKDTHIEEQVLNTS EECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH ALSLLEDLDYASAITEFAKQQLALNAVSSVFSKVGSVSLFDYI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2193164; 11677609 [H]